BLASTX nr result

ID: Cimicifuga21_contig00027233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027233
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containi...    55   6e-06

>ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 500

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 36/82 (43%), Positives = 55/82 (67%)
 Frame = +3

Query: 48  KQLHAHIITTGLHLHQENYIAVKLVTLSTTPSSFSPKNIAYARTLFDASINTANVYLWTS 227
           K+LHAH+IT+GLH  QEN++  KL+TL T+ SS S   + +AR LFDA I+  + YL+ +
Sbjct: 5   KRLHAHLITSGLH-QQENHLR-KLITLYTSSSSSS---LHHARLLFDA-IHHPSTYLYNT 58

Query: 228 MITAYSRHQCTSVEAILIYQKM 293
           M   Y+    T + A+L+++ M
Sbjct: 59  MFRVYAASP-TPLHALLLHRHM 79


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