BLASTX nr result

ID: Cimicifuga21_contig00027232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027232
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271836.1| PREDICTED: uncharacterized protein LOC100241...   113   2e-23
ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22
ref|XP_004159851.1| PREDICTED: uncharacterized LOC101208291 [Cuc...   105   5e-21
ref|XP_002513023.1| hypothetical protein RCOM_1451930 [Ricinus c...   105   5e-21
emb|CAN78550.1| hypothetical protein VITISV_003242 [Vitis vinifera]   105   5e-21

>ref|XP_002271836.1| PREDICTED: uncharacterized protein LOC100241175 [Vitis vinifera]
          Length = 410

 Score =  113 bits (282), Expect = 2e-23
 Identities = 52/129 (40%), Positives = 84/129 (65%)
 Frame = -2

Query: 387 HTDSKIISMLNRSASLLRQNPQKNLVPNIELLRALGVPESNISMLLVTQPRSLSISANCF 208
           H D++++S + RS  +  ++  KN+VPNI  L+ +GVPES+I  L+   P  + +  + F
Sbjct: 175 HLDNRVVSAIKRSPRIFLEDVNKNIVPNITALQEIGVPESSIVFLITYYPIVVQLKHDRF 234

Query: 207 KEIVEKLKKMDFDPSLFNFIRAIQIFTSLSESSIEGKFNVYKKWDWSEEQIIRAFRAEPY 28
            E V+K+ +M FDP    FI+AIQ+F  +S+S+ E K  VY++W WS ++I+  FRA P 
Sbjct: 235 GETVKKVMEMGFDPLTVVFIKAIQVFGGMSKSTWEQKMEVYRRWGWSNDEIVLLFRAFPA 294

Query: 27  CLMISERNI 1
           C+ +SE+ I
Sbjct: 295 CMSLSEKKI 303


>ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score =  108 bits (271), Expect = 3e-22
 Identities = 53/129 (41%), Positives = 82/129 (63%), Gaps = 1/129 (0%)
 Frame = -2

Query: 384 TDSKIISMLNRSASLLRQNPQKNLVPNIELLRALGVPESNISMLLVTQPRSLSISANCFK 205
           +D KI+S   R+  +  ++  KNL+PN+ELLR +GVP+S IS+LL   P ++  +   F 
Sbjct: 178 SDEKIVSAFKRTTWIFLEDLSKNLIPNLELLRKVGVPQSCISLLLTHFPEAMMENHEEFS 237

Query: 204 EIVEKLKKMDFDPSLFNFIRAIQIFTSLSESSI-EGKFNVYKKWDWSEEQIIRAFRAEPY 28
           E VE+++KM FDP+   F+ A+         SI E  F VYK+W W+++ I+ AFR  P+
Sbjct: 238 ENVEEVRKMGFDPNKSTFVLAVHALCGKCNKSIWERCFEVYKRWGWTKDDILSAFRKHPH 297

Query: 27  CLMISERNI 1
           C+M+SE+ I
Sbjct: 298 CMMLSEKKI 306


>ref|XP_004159851.1| PREDICTED: uncharacterized LOC101208291 [Cucumis sativus]
          Length = 370

 Score =  105 bits (261), Expect = 5e-21
 Identities = 55/128 (42%), Positives = 79/128 (61%)
 Frame = -2

Query: 384 TDSKIISMLNRSASLLRQNPQKNLVPNIELLRALGVPESNISMLLVTQPRSLSISANCFK 205
           T  K ++ + R   +L  N + ++ PNIE+L+  GVP+SNIS  L  QP+  S S+  FK
Sbjct: 143 TVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPDSNISTYLQRQPKVFSTSSIRFK 202

Query: 204 EIVEKLKKMDFDPSLFNFIRAIQIFTSLSESSIEGKFNVYKKWDWSEEQIIRAFRAEPYC 25
           EIVE++ +M FDP    FI A+    SL++SS + K  VY+KW  SEE+   AFR  P+C
Sbjct: 203 EIVERVTEMGFDPQRLQFIVAVHALRSLTKSSWDKKLEVYRKWGLSEEEFYLAFRKYPWC 262

Query: 24  LMISERNI 1
           + +SE  I
Sbjct: 263 MALSEDKI 270


>ref|XP_002513023.1| hypothetical protein RCOM_1451930 [Ricinus communis]
           gi|223548034|gb|EEF49526.1| hypothetical protein
           RCOM_1451930 [Ricinus communis]
          Length = 1025

 Score =  105 bits (261), Expect = 5e-21
 Identities = 52/126 (41%), Positives = 75/126 (59%)
 Frame = -2

Query: 387 HTDSKIISMLNRSASLLRQNPQKNLVPNIELLRALGVPESNISMLLVTQPRSLSISANCF 208
           H+D K I+ + R   +L    + ++ PNI  LR  GVP S +S+ +   P+ +   A+  
Sbjct: 579 HSDGKTITAIKRFPHILMLQLEADVTPNINTLREYGVPASKVSLFVHCFPQLIGTRADMS 638

Query: 207 KEIVEKLKKMDFDPSLFNFIRAIQIFTSLSESSIEGKFNVYKKWDWSEEQIIRAFRAEPY 28
           K+IVE++KKM FDPS   F+ AI + T  S S  + K +VYK+W WS E I RAF   P+
Sbjct: 639 KKIVEEVKKMGFDPSKSKFVVAITVLTGTSRSMWDRKVDVYKRWGWSTEDIYRAFAKNPW 698

Query: 27  CLMISE 10
           C+ ISE
Sbjct: 699 CMTISE 704



 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/128 (37%), Positives = 76/128 (59%)
 Frame = -2

Query: 384 TDSKIISMLNRSASLLRQNPQKNLVPNIELLRALGVPESNISMLLVTQPRSLSISANCFK 205
           +D K I+ + R  ++L +  +  ++PNI  L+  GVP +NI +L+   P+ + +  + FK
Sbjct: 156 SDEKTIAAIKRYPNILARRLETAVIPNINTLQENGVPAANILLLVRYHPQKIEMETDKFK 215

Query: 204 EIVEKLKKMDFDPSLFNFIRAIQIFTSLSESSIEGKFNVYKKWDWSEEQIIRAFRAEPYC 25
           +IVE++K M FDP    F+ AI +    S S  + K +VYK+W WS E I RAF   P+C
Sbjct: 216 KIVEEVKIMGFDPLKSQFVLAIMVLIGTSRSMWDRKVDVYKRWGWSTEDIYRAFAKYPWC 275

Query: 24  LMISERNI 1
           + ISE  +
Sbjct: 276 MAISEDKV 283


>emb|CAN78550.1| hypothetical protein VITISV_003242 [Vitis vinifera]
          Length = 384

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/128 (41%), Positives = 79/128 (61%)
 Frame = -2

Query: 384 TDSKIISMLNRSASLLRQNPQKNLVPNIELLRALGVPESNISMLLVTQPRSLSISANCFK 205
           ++   ++ + R + +L  NP   +  NI  L+  GVP+SNI+ LL  QPR+  +  N F+
Sbjct: 164 SEEMTMATVKRFSRVLIVNPHICVESNINALQESGVPKSNIAALLSLQPRAFMVRPNHFR 223

Query: 204 EIVEKLKKMDFDPSLFNFIRAIQIFTSLSESSIEGKFNVYKKWDWSEEQIIRAFRAEPYC 25
           EI+E++KKM FDPS   F  A+Q  T +S+S+ E K + YK+W WSEE I  AF   P+C
Sbjct: 224 EILEEVKKMGFDPSKTRFPTAVQAMTGMSKSTWERKIDAYKRWGWSEEDIWLAFTKSPWC 283

Query: 24  LMISERNI 1
           ++ SE  I
Sbjct: 284 MIYSEDKI 291


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