BLASTX nr result
ID: Cimicifuga21_contig00027216
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00027216 (348 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like... 124 6e-27 emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera] 124 6e-27 ref|XP_002314635.1| predicted protein [Populus trichocarpa] gi|2... 117 8e-25 ref|XP_002263905.1| PREDICTED: RING-H2 finger protein ATL1-like ... 116 2e-24 emb|CBI23610.3| unnamed protein product [Vitis vinifera] 114 6e-24 >ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like [Vitis vinifera] Length = 359 Score = 124 bits (312), Expect = 6e-27 Identities = 65/106 (61%), Positives = 77/106 (72%) Frame = -1 Query: 318 SASPGKIDQKIGYKKARKFQHVSSMGDECINVRAKDDQFSFQPIRRSISMDSSADRQLFL 139 S SP K++Q+I KKARKF HV+SMGDECI+ R KDDQFS QPIRRS SMDSS DRQL+L Sbjct: 251 SPSPRKLEQRIVPKKARKFHHVASMGDECIDTRGKDDQFSIQPIRRSFSMDSSNDRQLYL 310 Query: 138 SIQEIIQQKRHLNXXXXXXXXXXXXXXXGKLRRSFFSFGHGRGSRN 1 +IQEI+QQ R ++ + RRSFFSFGHGRGSR+ Sbjct: 311 AIQEILQQNRPVS------DFSPSEGCSSRFRRSFFSFGHGRGSRS 350 >emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera] Length = 419 Score = 124 bits (312), Expect = 6e-27 Identities = 65/106 (61%), Positives = 77/106 (72%) Frame = -1 Query: 318 SASPGKIDQKIGYKKARKFQHVSSMGDECINVRAKDDQFSFQPIRRSISMDSSADRQLFL 139 S SP K++Q+I KKARKF HV+SMGDECI+ R KDDQFS QPIRRS SMDSS DRQL+L Sbjct: 311 SPSPRKLEQRIVPKKARKFHHVASMGDECIDTRGKDDQFSIQPIRRSFSMDSSNDRQLYL 370 Query: 138 SIQEIIQQKRHLNXXXXXXXXXXXXXXXGKLRRSFFSFGHGRGSRN 1 +IQEI+QQ R ++ + RRSFFSFGHGRGSR+ Sbjct: 371 AIQEILQQNRPVS------DFSPSEGCSSRFRRSFFSFGHGRGSRS 410 >ref|XP_002314635.1| predicted protein [Populus trichocarpa] gi|222863675|gb|EEF00806.1| predicted protein [Populus trichocarpa] Length = 340 Score = 117 bits (294), Expect = 8e-25 Identities = 64/107 (59%), Positives = 75/107 (70%), Gaps = 1/107 (0%) Frame = -1 Query: 318 SASPGKIDQKIGYKKARKFQHVSSMGDECINVRAKDDQFS-FQPIRRSISMDSSADRQLF 142 S SP KI+Q +G+KKAR V+SMGDECI+ R KDDQF QPIRRS SMDSSADRQL+ Sbjct: 231 SPSPRKIEQGVGHKKARNLNKVTSMGDECIDTRGKDDQFGLIQPIRRSFSMDSSADRQLY 290 Query: 141 LSIQEIIQQKRHLNXXXXXXXXXXXXXXXGKLRRSFFSFGHGRGSRN 1 LSIQEI+QQ R + G+ RR+FFSFGHGRGSR+ Sbjct: 291 LSIQEIVQQSRQVT------EVSSVEGCSGRARRAFFSFGHGRGSRS 331 >ref|XP_002263905.1| PREDICTED: RING-H2 finger protein ATL1-like [Vitis vinifera] Length = 351 Score = 116 bits (291), Expect = 2e-24 Identities = 60/104 (57%), Positives = 73/104 (70%) Frame = -1 Query: 312 SPGKIDQKIGYKKARKFQHVSSMGDECINVRAKDDQFSFQPIRRSISMDSSADRQLFLSI 133 SP K+ QK+ KK+RKF +VSSMGDECI+VR KDDQF QPIRRS SMDS+AD QL++++ Sbjct: 244 SPTKLQQKLENKKSRKFHYVSSMGDECIDVREKDDQFLIQPIRRSFSMDSAADPQLYMTV 303 Query: 132 QEIIQQKRHLNXXXXXXXXXXXXXXXGKLRRSFFSFGHGRGSRN 1 QEII+ K ++RRSFFSFGHGRGSRN Sbjct: 304 QEIIRNKNR-----PLSEVSTSQECDSRVRRSFFSFGHGRGSRN 342 >emb|CBI23610.3| unnamed protein product [Vitis vinifera] Length = 194 Score = 114 bits (286), Expect = 6e-24 Identities = 59/93 (63%), Positives = 68/93 (73%) Frame = -1 Query: 279 KKARKFQHVSSMGDECINVRAKDDQFSFQPIRRSISMDSSADRQLFLSIQEIIQQKRHLN 100 KKARKF HV+SMGDECI+ R KDDQFS QPIRRS SMDSS DRQL+L+IQEI+QQ R ++ Sbjct: 99 KKARKFHHVASMGDECIDTRGKDDQFSIQPIRRSFSMDSSNDRQLYLAIQEILQQNRPVS 158 Query: 99 XXXXXXXXXXXXXXXGKLRRSFFSFGHGRGSRN 1 + RRSFFSFGHGRGSR+ Sbjct: 159 ------DFSPSEGCSSRFRRSFFSFGHGRGSRS 185