BLASTX nr result

ID: Cimicifuga21_contig00027216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027216
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like...   124   6e-27
emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]   124   6e-27
ref|XP_002314635.1| predicted protein [Populus trichocarpa] gi|2...   117   8e-25
ref|XP_002263905.1| PREDICTED: RING-H2 finger protein ATL1-like ...   116   2e-24
emb|CBI23610.3| unnamed protein product [Vitis vinifera]              114   6e-24

>ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like [Vitis vinifera]
          Length = 359

 Score =  124 bits (312), Expect = 6e-27
 Identities = 65/106 (61%), Positives = 77/106 (72%)
 Frame = -1

Query: 318 SASPGKIDQKIGYKKARKFQHVSSMGDECINVRAKDDQFSFQPIRRSISMDSSADRQLFL 139
           S SP K++Q+I  KKARKF HV+SMGDECI+ R KDDQFS QPIRRS SMDSS DRQL+L
Sbjct: 251 SPSPRKLEQRIVPKKARKFHHVASMGDECIDTRGKDDQFSIQPIRRSFSMDSSNDRQLYL 310

Query: 138 SIQEIIQQKRHLNXXXXXXXXXXXXXXXGKLRRSFFSFGHGRGSRN 1
           +IQEI+QQ R ++                + RRSFFSFGHGRGSR+
Sbjct: 311 AIQEILQQNRPVS------DFSPSEGCSSRFRRSFFSFGHGRGSRS 350


>emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]
          Length = 419

 Score =  124 bits (312), Expect = 6e-27
 Identities = 65/106 (61%), Positives = 77/106 (72%)
 Frame = -1

Query: 318 SASPGKIDQKIGYKKARKFQHVSSMGDECINVRAKDDQFSFQPIRRSISMDSSADRQLFL 139
           S SP K++Q+I  KKARKF HV+SMGDECI+ R KDDQFS QPIRRS SMDSS DRQL+L
Sbjct: 311 SPSPRKLEQRIVPKKARKFHHVASMGDECIDTRGKDDQFSIQPIRRSFSMDSSNDRQLYL 370

Query: 138 SIQEIIQQKRHLNXXXXXXXXXXXXXXXGKLRRSFFSFGHGRGSRN 1
           +IQEI+QQ R ++                + RRSFFSFGHGRGSR+
Sbjct: 371 AIQEILQQNRPVS------DFSPSEGCSSRFRRSFFSFGHGRGSRS 410


>ref|XP_002314635.1| predicted protein [Populus trichocarpa] gi|222863675|gb|EEF00806.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score =  117 bits (294), Expect = 8e-25
 Identities = 64/107 (59%), Positives = 75/107 (70%), Gaps = 1/107 (0%)
 Frame = -1

Query: 318 SASPGKIDQKIGYKKARKFQHVSSMGDECINVRAKDDQFS-FQPIRRSISMDSSADRQLF 142
           S SP KI+Q +G+KKAR    V+SMGDECI+ R KDDQF   QPIRRS SMDSSADRQL+
Sbjct: 231 SPSPRKIEQGVGHKKARNLNKVTSMGDECIDTRGKDDQFGLIQPIRRSFSMDSSADRQLY 290

Query: 141 LSIQEIIQQKRHLNXXXXXXXXXXXXXXXGKLRRSFFSFGHGRGSRN 1
           LSIQEI+QQ R +                G+ RR+FFSFGHGRGSR+
Sbjct: 291 LSIQEIVQQSRQVT------EVSSVEGCSGRARRAFFSFGHGRGSRS 331


>ref|XP_002263905.1| PREDICTED: RING-H2 finger protein ATL1-like [Vitis vinifera]
          Length = 351

 Score =  116 bits (291), Expect = 2e-24
 Identities = 60/104 (57%), Positives = 73/104 (70%)
 Frame = -1

Query: 312 SPGKIDQKIGYKKARKFQHVSSMGDECINVRAKDDQFSFQPIRRSISMDSSADRQLFLSI 133
           SP K+ QK+  KK+RKF +VSSMGDECI+VR KDDQF  QPIRRS SMDS+AD QL++++
Sbjct: 244 SPTKLQQKLENKKSRKFHYVSSMGDECIDVREKDDQFLIQPIRRSFSMDSAADPQLYMTV 303

Query: 132 QEIIQQKRHLNXXXXXXXXXXXXXXXGKLRRSFFSFGHGRGSRN 1
           QEII+ K                    ++RRSFFSFGHGRGSRN
Sbjct: 304 QEIIRNKNR-----PLSEVSTSQECDSRVRRSFFSFGHGRGSRN 342


>emb|CBI23610.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score =  114 bits (286), Expect = 6e-24
 Identities = 59/93 (63%), Positives = 68/93 (73%)
 Frame = -1

Query: 279 KKARKFQHVSSMGDECINVRAKDDQFSFQPIRRSISMDSSADRQLFLSIQEIIQQKRHLN 100
           KKARKF HV+SMGDECI+ R KDDQFS QPIRRS SMDSS DRQL+L+IQEI+QQ R ++
Sbjct: 99  KKARKFHHVASMGDECIDTRGKDDQFSIQPIRRSFSMDSSNDRQLYLAIQEILQQNRPVS 158

Query: 99  XXXXXXXXXXXXXXXGKLRRSFFSFGHGRGSRN 1
                           + RRSFFSFGHGRGSR+
Sbjct: 159 ------DFSPSEGCSSRFRRSFFSFGHGRGSRS 185


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