BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027214
         (1270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   166   9e-39
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   115   3e-23
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   114   5e-23
gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]    112   2e-22
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   111   3e-22

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  166 bits (421), Expect = 9e-39
 Identities = 122/384 (31%), Positives = 185/384 (48%), Gaps = 21/384 (5%)
 Frame = -1

Query: 1222 DWSEAPQDILKLIAELL-SIDDYVRFGAVCKSWLPVIVDQGRYNFSPKTLPWLMFPRGND 1046
            DWS+ P D LKLIAE L S++DYVRFG VCKSW  +  D+     S K+ PWLM     +
Sbjct: 921  DWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSSKS-PWLMLAEKEN 979

Query: 1045 NDIHDIWN---NSVHRLNLEGVSKRCCFGSPYSRLVVFHNGI----------LEIXXXXX 905
            ++I   ++     V+ + L  V  + C+GSPY  LV     +          ++I     
Sbjct: 980  SEIRGFYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLLNPLTRVQILLPSL 1039

Query: 904  XXXXXXXXXSTFDNYKIRLSCGF-HKVVLVSSPSTQANDQFLVFVVFNLDGKLAFARPRN 728
                             R    F +K VL S+PS+       V ++++  G+LAF +P +
Sbjct: 1040 RACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAPSSP---DCAVMIIYSDYGRLAFTKPGH 1096

Query: 727  RTWTTINMERTVIDDIVHFNNQFYMVDTECVVWRFNITRPTPIGTQFVLPPP----HNVK 560
            +TWT +  E   +DDI++FN  F  V+    VW  +I+       +F   P       ++
Sbjct: 1097 QTWTLLESESGPVDDIIYFNGSFLAVNLSWEVWICDISGSQLKTIRFAAAPALQDVDEIE 1156

Query: 559  YLDRTFYLVELLGQMHMVVKYGHYKCLSSKHHFELDSRPFEDGFMHYFRVFKMDLDTPRL 380
            Y  +  YLVE  G+++MV          +++ ++   R         F V K+D+   R 
Sbjct: 1157 YEAK--YLVESGGEIYMV----------TRNLYDTARRDIPYMRTWTFSVLKLDMCNKRW 1204

Query: 379  KEVYTIGDCAIFVGHNTSFSLLASDYPECKSSCIYFTDHRMGDLSSTGN--IGIFNLVTE 206
            +EV  +  C+ F+G+N SFS  ASDYPE + + IYFTD   G L+   N  +GI+N    
Sbjct: 1205 EEVENLDHCSFFLGNNHSFSTWASDYPEFRKNSIYFTDDYCGFLNIPRNFDMGIYNFQNT 1264

Query: 205  GVETLYTGDDDDSLCSLPVWFTPS 134
             +E    G D  S+ S P+W  PS
Sbjct: 1265 QIEHYPVGHDALSMFSAPLWIRPS 1288


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  115 bits (287), Expect = 3e-23
 Identities = 109/412 (26%), Positives = 179/412 (43%), Gaps = 49/412 (11%)
 Frame = -1

Query: 1222 DWSEAPQDILKLIAELLSI-DDYVRFGAVCKSWLPVIVDQGRYNFSPKTLPWLMFPRGND 1046
            DWS+ P +++++I++ L+I  DY+   AVC +W   I      N  P  LPWLM P+   
Sbjct: 4    DWSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTP--NHLPPQLPWLMLPQSQS 61

Query: 1045 ND------IHDIWNNSVHRLNLEGVS--KRCCFGSPYSRLVVFHNGILEIXXXXXXXXXX 890
                       +  N  H LNL  VS  KR C  S    +++     + +          
Sbjct: 62   QSNQSRRAFFSLSTNKFHFLNLPEVSYRKRHCGSSHGWLMILDDTPTILLINPLTRAKLS 121

Query: 889  XXXXSTFDN------------YKIRLSCG--------------FHKVVLVSSPSTQANDQ 788
                S+F N            Y +R   G                KVVL SSP    N  
Sbjct: 122  LPPLSSFPNVISFNYSDIGREYALRNLLGERVTVSLRQMRDSFIRKVVLSSSPLKDNN-- 179

Query: 787  FLVFVVFNLDGKLAFARPRNRTWTTINMERTVIDDIVHFNNQFYMVDTECVVWRFNITRP 608
            F+V  + N    LA+ R  +++W+ +   R+  +D++  N  FY V+    +   +I+  
Sbjct: 180  FVVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIVICDISSD 239

Query: 607  TPIGTQFVLPPPHNVKYLDRTFYLVELLGQMHMVVKYGHYKCLSSKH---HFELDSRPFE 437
            +P            V +++      +  G M  +V  G    L +++    +E D    E
Sbjct: 240  SP-----------RVSFMETPR---QAGGDMQYLVNSGDELLLVTRYLDLEYEFDHPDME 285

Query: 436  DGFMHY---FRVFKMDLDTPRLKEVYTIGDCAIFVGHNTSFSLLASDYPECKSSCIYFTD 266
               ++    F VF++D + P+   + T+GD A+F+G N+S SL A+D+  C  +CIY+TD
Sbjct: 286  PHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTD 345

Query: 265  HRMGDLSSTG-----NIGIFNLVTEGVETL--YTGDDDDSL-CSLPVWFTPS 134
              + D +  G     ++GIF L  E +E L  Y  +    L  S P+W +P+
Sbjct: 346  DYL-DANYDGHFGDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSPN 396


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  114 bits (285), Expect = 5e-23
 Identities = 108/410 (26%), Positives = 174/410 (42%), Gaps = 47/410 (11%)
 Frame = -1

Query: 1222 DWSEAPQDILKLIAELLSI-DDYVRFGAVCKSWLPVIVDQGRYNFSPKTLPWLMFPRGND 1046
            DWS+   ++L  IA+   I  DYVRF AVC +W   +     +   P  LPWLM P+   
Sbjct: 3    DWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHH--LPTQLPWLMLPQSQP 60

Query: 1045 NDIH----DIWNNSVHRLNL-EGVSKRCCFGSPYSRLVVFHNGI-LEIXXXXXXXXXXXX 884
            +  H     +  N  H L L E   +R   GS +  L++      + +            
Sbjct: 61   HHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLP 120

Query: 883  XXSTFDN------------YKIRLSCG--------------FHKVVLVSSPSTQANDQFL 782
              STF N            Y +R S G                K +L SSP+  ++  F+
Sbjct: 121  PLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSD--FI 178

Query: 781  VFVVFNLDGKLAFARPRNRTWTTINMERTVIDDIVHFNNQFYMVDTECVVWRFNITRPTP 602
              V+ N  G LA  R  + +WT +   ++  +D++     FY V+    +   +++  +P
Sbjct: 179  AVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVSGSSP 238

Query: 601  IGTQFVLPPPHNVKYLDRTFYLVELLGQMHMVVKYGHYKCLSSKHHFELDSRPFEDGFMH 422
              +   +P     ++     YLVE   ++ +V +Y              D  P +   ++
Sbjct: 239  RVSIIEMPQ----QFGGDLQYLVESGEELLLVTRY---------LDLTYDVEPDQTSLIY 285

Query: 421  Y---FRVFKMDLDTPRLKEVYTIGDCAIFVGHNTSFSLLASDYPECKSSCIYFTDHRMGD 251
                F+V ++DL  PR + V ++GD A+F+G N S SL + D+P CK +CIY+TD    D
Sbjct: 286  RTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSED 345

Query: 250  ----LSSTGNIGIFNLVTEGVETLYTGDDDDSLCS-------LPVWFTPS 134
                +    ++GIFNL    +E L         CS        P+W TP+
Sbjct: 346  NYDGIGGEQDLGIFNLEDGSIEPL--------PCSHFRIRWPPPLWVTPN 387


>gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]
          Length = 392

 Score =  112 bits (280), Expect = 2e-22
 Identities = 112/410 (27%), Positives = 179/410 (43%), Gaps = 47/410 (11%)
 Frame = -1

Query: 1222 DWSEAPQDILKLIAELLSI-DDYVRFGAVCKSW---LPVIVDQGRYNFSPKTLPWLMFPR 1055
            DW+E P D+L+ I++ L++  DY+RF  VC+SW   +P I  +      P  LP L+ P 
Sbjct: 3    DWTELPPDLLQQISDYLTVYSDYLRFRVVCQSWRSSVPKIPHR-----LPPQLPCLIIPL 57

Query: 1054 GNDN--DIHDIWNNSVHRLNLEGVS--KRCCFGSPYSRLVVFHNGILEIXXXXXXXXXXX 887
             +D    + +  +N +H L L   S  KR C  S     ++     + +           
Sbjct: 58   YHDCRCGLFNFSDNKIHFLYLPEASLRKRPCGSSHGWLTILDETPSILLLNPLTRAKFRL 117

Query: 886  XXXSTFDN------------YKIRLSCGF--------------HKVVLVSSPSTQANDQF 785
               STF N            Y IR   G                K+VL SSPS Q  + F
Sbjct: 118  PPLSTFPNVVSFDYSRVGREYLIRTPTGHIYTRNLRQMRDSFVKKIVLSSSPSNQ--NDF 175

Query: 784  LVFVVFNLDGKLAFARPRNRTWTTINMERTVIDDIVHFNNQFYMVDTECVVWRFNITRPT 605
            L   + N  G LAF R    +WT ++   +  +D+++ +  FY VD   VV   ++    
Sbjct: 176  LAVAILNHSGDLAFCRSGGGSWTFVDDAPSDCEDVIYTDGVFYAVDKYGVVSLMDLRGSR 235

Query: 604  PIGTQFVLPPPHNVKYLDRTFYLVELLGQMHMVVKYGHYKCLSSKHHFELDSRPFEDGFM 425
               +Q  L                +L G +  +V+ G    L S+ + ++ +   +D  +
Sbjct: 236  ---SQVSLVATER-----------QLAGDIQYLVRLGQELLLVSR-YLDIVNDGMDDELI 280

Query: 424  HY------FRVFKMDLDTPRLKEVYTIGDCAIFVGHNTSFSLLASDYPECKSSCIYFT-D 266
                    F VF+M+ + PR ++V  + + A+FVG N+S +  A+D+ E   +CIY+T D
Sbjct: 281  SVMYRTVRFEVFRMEWEGPRWEKVENLNEMALFVGGNSSMAFSAADFGEISGNCIYYTDD 340

Query: 265  HRMGDLSSTG---NIGIFNLVTEGVETL--YTGDDDDSLCSL-PVWFTPS 134
            +   D    G   ++GIF L  E  E L  Y+G        L P+W TP+
Sbjct: 341  YSDSDYQGQGEEPDMGIFRLCDESFEPLPYYSGGSHSRRRLLPPIWVTPN 390


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  111 bits (278), Expect = 3e-22
 Identities = 108/407 (26%), Positives = 172/407 (42%), Gaps = 44/407 (10%)
 Frame = -1

Query: 1222 DWSEAPQDILKLIAELLSI-DDYVRFGAVCKSWLPVIVDQGRYNFSPKTLPWLMFPRGND 1046
            DWS+   ++L  IA+   I  DYVRF AVC +W   +     +   P  LPWLM P+   
Sbjct: 3    DWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHH--LPTQLPWLMLPQSQP 60

Query: 1045 NDIH----DIWNNSVHRLNL-EGVSKRCCFGSPYSRLVVFHNGI-LEIXXXXXXXXXXXX 884
            +  H     +  N  H L L E   +R   GS +  L++      + +            
Sbjct: 61   HHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLP 120

Query: 883  XXSTFDN------------YKIRLSCG--------------FHKVVLVSSPSTQANDQFL 782
              STF N            Y +R S G                K +L SSP+  ++  F+
Sbjct: 121  PLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSD--FI 178

Query: 781  VFVVFNLDGKLAFARPRNRTWTTINMERTVIDDIVHFNNQFYMVDTECVVWRFNITRPTP 602
              V+ N  G LA  R  + +WT +   ++  +D++     FY V+    +   +++  +P
Sbjct: 179  AVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGSSP 238

Query: 601  IGTQFVLPPPHNVKYLDRTFYLVELLGQMHMVVKYGHYKCLSSKHHFELDSRPFEDGFMH 422
              +   +P     ++     YLVE   ++ +V +Y     L   +  E D          
Sbjct: 239  RVSIIEMPQ----QFGGDLQYLVESGEELLLVTRY-----LDLTYDVEXDQTSLIYRTTR 289

Query: 421  YFRVFKMDLDTPRLKEVYTIGDCAIFVGHNTSFSLLASDYPECKSSCIYFTDHRMGD--- 251
             F+V ++D   PR + V ++GD A+F+G N S SL + D+P CK +CIY+TD    D   
Sbjct: 290  -FQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYD 348

Query: 250  -LSSTGNIGIFNLVTEGVETLYTGDDDDSLCS-------LPVWFTPS 134
             +    ++GIFNL    +E L         CS        P+W TP+
Sbjct: 349  GIGGEQDLGIFNLEDGSIEPL--------PCSHFRIRWPPPLWVTPN 387