BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027200
         (1485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 ...   761   0.0  
ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinu...   732   0.0  
emb|CAE03039.3| OSJNBa0084A10.14 [Oryza sativa Japonica Group] g...   730   0.0  
gb|EAY94172.1| hypothetical protein OsI_15944 [Oryza sativa Indi...   730   0.0  
ref|XP_002447853.1| hypothetical protein SORBIDRAFT_06g016980 [S...   725   0.0  

>ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Vitis vinifera]
            gi|297739540|emb|CBI29722.3| unnamed protein product
            [Vitis vinifera]
          Length = 1458

 Score =  761 bits (1964), Expect = 0.0
 Identities = 383/492 (77%), Positives = 426/492 (86%)
 Frame = -1

Query: 1476 ENKMGMQKYKEMLDARAGLPIAELKGDILQLLKENDVLVVCGETGCGKTTQVPQFILDDM 1297
            ENKM + KYK+ML  R+GLPIAELK +ILQ+LKE  VLVVCGETG GKTTQVPQFILDDM
Sbjct: 596  ENKMKIGKYKDMLKTRSGLPIAELKSEILQVLKEKSVLVVCGETGSGKTTQVPQFILDDM 655

Query: 1296 IKAELGGYCNIVCTQPRRIAAISVAERVADERCEPPPGSDGSLVGYQVRLDSARHERTKL 1117
            I+A  GGYCNI+CTQPRRIAAISVAERVADERCEP PGSDGS+VGYQVRLDSA + RTKL
Sbjct: 656  IEAGNGGYCNIICTQPRRIAAISVAERVADERCEPSPGSDGSVVGYQVRLDSASNVRTKL 715

Query: 1116 LFCTTGILLRKLAGDKNLDDVTHVIVDEVHERSLLGDFLLVILKNLIEKQSVSNTRKLKV 937
            LFCTTGILLRKLAGDKNL  +THVIVDEVHERSLLGDFLL++LKNLIEKQS  +T KLKV
Sbjct: 716  LFCTTGILLRKLAGDKNLSGITHVIVDEVHERSLLGDFLLIVLKNLIEKQSTDSTPKLKV 775

Query: 936  ILMSATVDSSLFSSYFGNCPVLTAEGRTHPVSTYFLEDIYESLEYCLALDSPASFRQMTP 757
            ILMSATVDS+LFS YFG CPV+TA GRTHPVSTYFLEDIYES++Y LA DSPAS R  T 
Sbjct: 776  ILMSATVDSNLFSRYFGGCPVITAVGRTHPVSTYFLEDIYESIDYRLASDSPASIRYETS 835

Query: 756  TKEKLRSSTVDNHRGKKNLVLSSWGDDSQLYENYVNPNYDSSSYGSFSERTQENLKALNE 577
             K+K  +S V+N RGK+NLVLS+WGDDS L E  +NP Y  ++Y S+SE+TQ+NLK LNE
Sbjct: 836  IKQK--TSAVNNRRGKRNLVLSAWGDDSVLSEECINPYYVPNAYQSYSEKTQQNLKRLNE 893

Query: 576  DVIDYDLLEDLICHVDETHPTGAILVFLPGVAEIYLLLDRLVASYQFGGYSSDWLLPLHS 397
            DVIDYDLLEDL+C+VDET+P GAILVFLPGVAEIY+LLD+L ASY+F G SSDWLLPLHS
Sbjct: 894  DVIDYDLLEDLVCYVDETYPAGAILVFLPGVAEIYMLLDKLAASYRFRGLSSDWLLPLHS 953

Query: 396  SLASADQKKVFLSPPENIRKVIIATDIAETSITIDDVVYVIDCGKHKEHRYNPQKKLSSM 217
            S+AS DQ+KVFL PPENIRKVIIAT+IAETSITIDDVVYVIDCGKHKE+RYNPQKKLSSM
Sbjct: 954  SIASDDQRKVFLQPPENIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSM 1013

Query: 216  VEDWISXXXXXXXXXXXXRVKPGICFCLYTRQRFENIMRPYQVPEMLRMPLMELCLQVKS 37
            VEDWIS            RVKPGICF LYT  RFE ++RP+QVPEMLRMPL+ELCLQ+K 
Sbjct: 1014 VEDWISQANAKQRRGRAGRVKPGICFSLYTHYRFEKLLRPFQVPEMLRMPLVELCLQIKL 1073

Query: 36   LSLGYIKPFLLK 1
            LSLG IKPFL K
Sbjct: 1074 LSLGNIKPFLSK 1085


>ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223531539|gb|EEF33369.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1509

 Score =  732 bits (1890), Expect = 0.0
 Identities = 369/493 (74%), Positives = 424/493 (86%)
 Frame = -1

Query: 1479 QENKMGMQKYKEMLDARAGLPIAELKGDILQLLKENDVLVVCGETGCGKTTQVPQFILDD 1300
            QE K  + KY+E+L  R  LPIA LK +ILQ+LKEN+ LVVCGETG GKTTQVPQFILDD
Sbjct: 594  QEKKKNVLKYREILKTRGALPIAGLKNEILQMLKENNCLVVCGETGSGKTTQVPQFILDD 653

Query: 1299 MIKAELGGYCNIVCTQPRRIAAISVAERVADERCEPPPGSDGSLVGYQVRLDSARHERTK 1120
            MI++  GG CNI+CTQPRRIAAISVAERVA ER EPPPGS GSLVGYQVRLDSAR+ERTK
Sbjct: 654  MIESGRGGQCNIICTQPRRIAAISVAERVAYERYEPPPGSGGSLVGYQVRLDSARNERTK 713

Query: 1119 LLFCTTGILLRKLAGDKNLDDVTHVIVDEVHERSLLGDFLLVILKNLIEKQSVSNTRKLK 940
            LLFCTTGILLR+LAGD+NL  +THVIVDEVHERSLLGDFLL++LK+L+EKQS   T KLK
Sbjct: 714  LLFCTTGILLRRLAGDRNLSGITHVIVDEVHERSLLGDFLLIVLKSLLEKQSDQGTPKLK 773

Query: 939  VILMSATVDSSLFSSYFGNCPVLTAEGRTHPVSTYFLEDIYESLEYCLALDSPASFRQMT 760
            VILMSATVDS+LFS+YFG+CPVL+A+GRTHPV+TYFLEDIYES++Y LA DSPA+    T
Sbjct: 774  VILMSATVDSTLFSNYFGHCPVLSAQGRTHPVTTYFLEDIYESIDYHLASDSPAALGLQT 833

Query: 759  PTKEKLRSSTVDNHRGKKNLVLSSWGDDSQLYENYVNPNYDSSSYGSFSERTQENLKALN 580
             T  K  S  V++ RGKKNLVLS WGDDS L E  +NP++ SS+Y S+SE+TQ+NLK L+
Sbjct: 834  STIAK--SGPVNDRRGKKNLVLSGWGDDSLLSEEIINPHFVSSNYQSYSEQTQKNLKRLD 891

Query: 579  EDVIDYDLLEDLICHVDETHPTGAILVFLPGVAEIYLLLDRLVASYQFGGYSSDWLLPLH 400
            ED+IDYDLLEDLI HVD+T+  GAILVFLPG++EI++LLDRLVASY+FGG SS+W+LPLH
Sbjct: 892  EDIIDYDLLEDLIFHVDQTYGEGAILVFLPGMSEIHMLLDRLVASYRFGGPSSNWVLPLH 951

Query: 399  SSLASADQKKVFLSPPENIRKVIIATDIAETSITIDDVVYVIDCGKHKEHRYNPQKKLSS 220
            SS+AS DQKKVFL PPENIRKVIIAT+IAETSITIDDVVYVIDCGKHKE+RYNPQKKL+S
Sbjct: 952  SSIASTDQKKVFLRPPENIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLTS 1011

Query: 219  MVEDWISXXXXXXXXXXXXRVKPGICFCLYTRQRFENIMRPYQVPEMLRMPLMELCLQVK 40
            MVEDWIS            RVKPGICFCLYT  RF+ +MRPYQVPEMLRMPL+ELCLQ+K
Sbjct: 1012 MVEDWISQANARQRRGRAGRVKPGICFCLYTCHRFKKLMRPYQVPEMLRMPLVELCLQIK 1071

Query: 39   SLSLGYIKPFLLK 1
             LSLG+IKPFL K
Sbjct: 1072 ILSLGHIKPFLSK 1084


>emb|CAE03039.3| OSJNBa0084A10.14 [Oryza sativa Japonica Group]
            gi|116309362|emb|CAH66443.1| B0308C03.3 [Oryza sativa
            Indica Group]
          Length = 1439

 Score =  730 bits (1884), Expect = 0.0
 Identities = 363/494 (73%), Positives = 418/494 (84%), Gaps = 2/494 (0%)
 Frame = -1

Query: 1476 ENKMGMQKYKEMLDARAGLPIAELKGDILQLLKENDVLVVCGETGCGKTTQVPQFILDDM 1297
            ENKM    Y +ML+ARA LPI+  K   LQLLKENDV+VVCGETGCGKTTQVPQFILDDM
Sbjct: 571  ENKMKQSSYLKMLEARASLPISRFKDHFLQLLKENDVIVVCGETGCGKTTQVPQFILDDM 630

Query: 1296 IKAELGGYCNIVCTQPRRIAAISVAERVADERCEPPPGSDGSLVGYQVRLDSARHERTKL 1117
            I++ELGGYC+IVCTQPRRIAAISVAERV+ ERCE  PGS  SLVGYQVRLDSAR+ERTKL
Sbjct: 631  IESELGGYCSIVCTQPRRIAAISVAERVSSERCESSPGSKDSLVGYQVRLDSARNERTKL 690

Query: 1116 LFCTTGILLRKLAGDKNLDDVTHVIVDEVHERSLLGDFLLVILKNLIEKQSVSNTRKLKV 937
            LFCTTGILLRKL+G+ +L DVTHV+VDEVHER++LGDFLL++LK+L+EK+S    RKLKV
Sbjct: 691  LFCTTGILLRKLSGNNDLSDVTHVVVDEVHERTILGDFLLIVLKSLVEKRSNQPGRKLKV 750

Query: 936  ILMSATVDSSLFSSYFGNCPVLTAEGRTHPVSTYFLEDIYESLEYCLALDSPAS--FRQM 763
            ILMSATVDSSLF+ YFG+CPV+  EGRTHPVS++FLED+YE +EYCLALDSPAS  + Q 
Sbjct: 751  ILMSATVDSSLFARYFGDCPVINVEGRTHPVSSHFLEDVYEKMEYCLALDSPASGAYFQQ 810

Query: 762  TPTKEKLRSSTVDNHRGKKNLVLSSWGDDSQLYENYVNPNYDSSSYGSFSERTQENLKAL 583
               K K  SSTV+N RGKKNLVLSSWGD+S L E+YVNP+Y +  Y S+SERT +NLK L
Sbjct: 811  HGEKWKNASSTVNNRRGKKNLVLSSWGDESVLTEDYVNPHYTTDCYQSYSERTNQNLKRL 870

Query: 582  NEDVIDYDLLEDLICHVDETHPTGAILVFLPGVAEIYLLLDRLVASYQFGGYSSDWLLPL 403
            NEDVID+DLLEDLIC++DE  P GA+LVFLPGVAEI +L+DRL AS +FG  SSDW+LPL
Sbjct: 871  NEDVIDFDLLEDLICYIDENCPPGAVLVFLPGVAEIDMLIDRLSASVRFGRESSDWILPL 930

Query: 402  HSSLASADQKKVFLSPPENIRKVIIATDIAETSITIDDVVYVIDCGKHKEHRYNPQKKLS 223
            HS LA  DQ+KVF SPPENIRK+I+ATDIAETSITIDDV+YV+D GKHKE+RYNPQKK+S
Sbjct: 931  HSLLAPTDQRKVFQSPPENIRKIIVATDIAETSITIDDVIYVVDTGKHKENRYNPQKKMS 990

Query: 222  SMVEDWISXXXXXXXXXXXXRVKPGICFCLYTRQRFENIMRPYQVPEMLRMPLMELCLQV 43
            S+VEDWIS            RVKPG+CFCLYTR RFE +MRP+QVPEMLRMPL ELCLQ+
Sbjct: 991  SIVEDWISRANAKQRRGRAGRVKPGLCFCLYTRHRFEKMMRPFQVPEMLRMPLTELCLQI 1050

Query: 42   KSLSLGYIKPFLLK 1
            KSL LG IK FLLK
Sbjct: 1051 KSLHLGGIKSFLLK 1064


>gb|EAY94172.1| hypothetical protein OsI_15944 [Oryza sativa Indica Group]
          Length = 1439

 Score =  730 bits (1884), Expect = 0.0
 Identities = 363/494 (73%), Positives = 418/494 (84%), Gaps = 2/494 (0%)
 Frame = -1

Query: 1476 ENKMGMQKYKEMLDARAGLPIAELKGDILQLLKENDVLVVCGETGCGKTTQVPQFILDDM 1297
            ENKM    Y +ML+ARA LPI+  K   LQLLKENDV+VVCGETGCGKTTQVPQFILDDM
Sbjct: 571  ENKMKQSSYLKMLEARASLPISRFKDHFLQLLKENDVIVVCGETGCGKTTQVPQFILDDM 630

Query: 1296 IKAELGGYCNIVCTQPRRIAAISVAERVADERCEPPPGSDGSLVGYQVRLDSARHERTKL 1117
            I++ELGGYC+IVCTQPRRIAAISVAERV+ ERCE  PGS  SLVGYQVRLDSAR+ERTKL
Sbjct: 631  IESELGGYCSIVCTQPRRIAAISVAERVSSERCESSPGSKDSLVGYQVRLDSARNERTKL 690

Query: 1116 LFCTTGILLRKLAGDKNLDDVTHVIVDEVHERSLLGDFLLVILKNLIEKQSVSNTRKLKV 937
            LFCTTGILLRKL+G+ +L DVTHV+VDEVHER++LGDFLL++LK+L+EK+S    RKLKV
Sbjct: 691  LFCTTGILLRKLSGNNDLSDVTHVVVDEVHERTILGDFLLIVLKSLVEKRSNQPGRKLKV 750

Query: 936  ILMSATVDSSLFSSYFGNCPVLTAEGRTHPVSTYFLEDIYESLEYCLALDSPAS--FRQM 763
            ILMSATVDSSLF+ YFG+CPV+  EGRTHPVS++FLED+YE +EYCLALDSPAS  + Q 
Sbjct: 751  ILMSATVDSSLFARYFGDCPVINVEGRTHPVSSHFLEDVYEKMEYCLALDSPASGAYFQQ 810

Query: 762  TPTKEKLRSSTVDNHRGKKNLVLSSWGDDSQLYENYVNPNYDSSSYGSFSERTQENLKAL 583
               K K  SSTV+N RGKKNLVLSSWGD+S L E+YVNP+Y +  Y S+SERT +NLK L
Sbjct: 811  HGEKWKNASSTVNNRRGKKNLVLSSWGDESVLTEDYVNPHYTTDCYQSYSERTNQNLKRL 870

Query: 582  NEDVIDYDLLEDLICHVDETHPTGAILVFLPGVAEIYLLLDRLVASYQFGGYSSDWLLPL 403
            NEDVID+DLLEDLIC++DE  P GA+LVFLPGVAEI +L+DRL AS +FG  SSDW+LPL
Sbjct: 871  NEDVIDFDLLEDLICYIDENCPPGAVLVFLPGVAEIDMLIDRLSASVRFGRESSDWILPL 930

Query: 402  HSSLASADQKKVFLSPPENIRKVIIATDIAETSITIDDVVYVIDCGKHKEHRYNPQKKLS 223
            HS LA  DQ+KVF SPPENIRK+I+ATDIAETSITIDDV+YV+D GKHKE+RYNPQKK+S
Sbjct: 931  HSLLAPTDQRKVFQSPPENIRKIIVATDIAETSITIDDVIYVVDTGKHKENRYNPQKKMS 990

Query: 222  SMVEDWISXXXXXXXXXXXXRVKPGICFCLYTRQRFENIMRPYQVPEMLRMPLMELCLQV 43
            S+VEDWIS            RVKPG+CFCLYTR RFE +MRP+QVPEMLRMPL ELCLQ+
Sbjct: 991  SIVEDWISRANAKQRRGRAGRVKPGLCFCLYTRHRFEKMMRPFQVPEMLRMPLTELCLQI 1050

Query: 42   KSLSLGYIKPFLLK 1
            KSL LG IK FLLK
Sbjct: 1051 KSLHLGGIKSFLLK 1064


>ref|XP_002447853.1| hypothetical protein SORBIDRAFT_06g016980 [Sorghum bicolor]
            gi|241939036|gb|EES12181.1| hypothetical protein
            SORBIDRAFT_06g016980 [Sorghum bicolor]
          Length = 1240

 Score =  725 bits (1871), Expect = 0.0
 Identities = 363/494 (73%), Positives = 417/494 (84%), Gaps = 2/494 (0%)
 Frame = -1

Query: 1476 ENKMGMQKYKEMLDARAGLPIAELKGDILQLLKENDVLVVCGETGCGKTTQVPQFILDDM 1297
            E+K  +  Y +ML+ARA LPIA  K   LQLLKENDV+VV GETGCGKTTQVPQFILDDM
Sbjct: 560  EDKRKLPNYLKMLEARASLPIARQKQHFLQLLKENDVVVVSGETGCGKTTQVPQFILDDM 619

Query: 1296 IKAELGGYCNIVCTQPRRIAAISVAERVADERCEPPPGSDGSLVGYQVRLDSARHERTKL 1117
            I++ELGG CNIVCTQPRRIAAISVAERV+DERCE  PGS+ SLVGYQVRLDSAR+ERTKL
Sbjct: 620  IESELGGSCNIVCTQPRRIAAISVAERVSDERCESSPGSNDSLVGYQVRLDSARNERTKL 679

Query: 1116 LFCTTGILLRKLAGDKNLDDVTHVIVDEVHERSLLGDFLLVILKNLIEKQSVSNTRKLKV 937
            LFCTTGILLRKL+G+++L DVTHV+VDEVHER++L DFLL++LKNL+EK+S    RKLKV
Sbjct: 680  LFCTTGILLRKLSGNRDLSDVTHVVVDEVHERTILSDFLLIVLKNLVEKRSNQQGRKLKV 739

Query: 936  ILMSATVDSSLFSSYFGNCPVLTAEGRTHPVSTYFLEDIYESLEYCLALDSPASFRQMTP 757
            ILMSATVDSSLF+ YFG CPV++ EGRTHPVST+FLED+YE +EYCLALDSPAS      
Sbjct: 740  ILMSATVDSSLFARYFGECPVISVEGRTHPVSTHFLEDVYEKMEYCLALDSPASGAYFAQ 799

Query: 756  TKEKLR--SSTVDNHRGKKNLVLSSWGDDSQLYENYVNPNYDSSSYGSFSERTQENLKAL 583
              EK +  SS+V+N RGKKNLVLSSWGD+S L E Y+NP+Y S  Y S++ERT +NLK L
Sbjct: 800  HGEKWKHASSSVNNRRGKKNLVLSSWGDESMLSEGYINPHYISDYYKSYNERTNQNLKHL 859

Query: 582  NEDVIDYDLLEDLICHVDETHPTGAILVFLPGVAEIYLLLDRLVASYQFGGYSSDWLLPL 403
            NEDVID+DLLEDLIC++DE  P GAILVFLPGVAEI LL+DRL AS +FGG SSDW+LPL
Sbjct: 860  NEDVIDFDLLEDLICYIDENCPPGAILVFLPGVAEIDLLIDRLSASVRFGGASSDWILPL 919

Query: 402  HSSLASADQKKVFLSPPENIRKVIIATDIAETSITIDDVVYVIDCGKHKEHRYNPQKKLS 223
            HS L  +DQ+KVF SPP+N RKVIIATDIAETSITIDDV+YV+D GKHKE+RYNP+KK+S
Sbjct: 920  HSLLGPSDQRKVFQSPPDNFRKVIIATDIAETSITIDDVIYVVDTGKHKENRYNPRKKMS 979

Query: 222  SMVEDWISXXXXXXXXXXXXRVKPGICFCLYTRQRFENIMRPYQVPEMLRMPLMELCLQV 43
            S+VEDWIS            RVKPG+CFCLYTR RFENIMRP+QVPEMLRMPL ELCLQ+
Sbjct: 980  SIVEDWISRANAKQRRGRAGRVKPGLCFCLYTRHRFENIMRPFQVPEMLRMPLTELCLQI 1039

Query: 42   KSLSLGYIKPFLLK 1
            KSL LG IK FLLK
Sbjct: 1040 KSLHLGDIKSFLLK 1053