BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027191
         (975 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280389.1| PREDICTED: SWI/SNF complex subunit SWI3A [Vi...   352   1e-94
emb|CAN80839.1| hypothetical protein VITISV_043833 [Vitis vinifera]   352   1e-94
ref|XP_004168975.1| PREDICTED: SWI/SNF complex subunit SWI3A-lik...   323   3e-86
ref|XP_004138253.1| PREDICTED: SWI/SNF complex subunit SWI3A-lik...   323   3e-86
ref|XP_003602787.1| SWI/SNF complex subunit SMARCC2 [Medicago tr...   317   2e-84

>ref|XP_002280389.1| PREDICTED: SWI/SNF complex subunit SWI3A [Vitis vinifera]
           gi|297734457|emb|CBI15704.3| unnamed protein product
           [Vitis vinifera]
          Length = 563

 Score =  352 bits (902), Expect = 1e-94
 Identities = 177/317 (55%), Positives = 221/317 (69%)
 Frame = +2

Query: 11  METIEDANSKLFPANEPDHELYTIPSYSSWFSWNDIHETERISFKEFFNGTSISRTPKIY 190
           ME+  D +SKL   +EP+ +LYTIP +SSWFSW++IHE E+IS KEFF+G+SISRTPKIY
Sbjct: 1   MESTPDPSSKLTRHDEPELDLYTIPIHSSWFSWDEIHEKEKISLKEFFDGSSISRTPKIY 60

Query: 191 KEYRDFIINKFREDPSRRLKFTEIRKSLIGDVSLIHKVFLFLDKWGLINFGAPGLSDSLT 370
           KEYRDFII+K+REDPSRRL F EIRKSL+GDVSL+HKVFLFL++WGLINFGAPG  DS  
Sbjct: 61  KEYRDFIISKYREDPSRRLTFAEIRKSLVGDVSLLHKVFLFLERWGLINFGAPGGEDSAA 120

Query: 371 VNEDEESRKIVYEEGAPNGVRVVAFPNSAKAVTLPTGWSNAGDVIENGFRLPPLASYSDV 550
           V E  E  ++  E+GAPNG+RVVA PNS K +T+P      G+V ENGFRLPPLASYSDV
Sbjct: 121 VAEGAERHRVRSEDGAPNGIRVVAMPNSLKPITMPLTLDVNGEVDENGFRLPPLASYSDV 180

Query: 551 FGDLMRQKSQNGLSCASCGEVCGSNNESNKKENIVACSRCLKNGKDEXXXXXXXXXXXXX 730
           F DL ++K   GL C +CG+ C S + +  K + V C +C KNG                
Sbjct: 181 FSDLTKEK---GLVCGNCGDNCDSGHYNCLKGSPVICVKCFKNGNYGENRSVDDFKFNDC 237

Query: 731 XXXXXNHAADSWTDAETXXXXXXXXXHGDNWDLVAQNVRTKSKSDCIAKLIQLPFGEFML 910
                N  A  WT+AET         HGD+W+LV QNV+TK+K DCI+KLI+LPFGE ML
Sbjct: 238 NENRGNRGA-VWTEAETLLLLESVLKHGDDWELVVQNVQTKTKLDCISKLIELPFGELML 296

Query: 911 STTNGKGDGRNPNNNTV 961
            ++ GK    N N +++
Sbjct: 297 GSSLGKSRASNDNTSSI 313


>emb|CAN80839.1| hypothetical protein VITISV_043833 [Vitis vinifera]
          Length = 563

 Score =  352 bits (902), Expect = 1e-94
 Identities = 177/317 (55%), Positives = 221/317 (69%)
 Frame = +2

Query: 11  METIEDANSKLFPANEPDHELYTIPSYSSWFSWNDIHETERISFKEFFNGTSISRTPKIY 190
           ME+  D +SKL   +EP+ +LYTIP +SSWFSW++IHE E+IS KEFF+G+SISRTPKIY
Sbjct: 1   MESTPDPSSKLTRHDEPELDLYTIPIHSSWFSWDEIHEKEKISLKEFFDGSSISRTPKIY 60

Query: 191 KEYRDFIINKFREDPSRRLKFTEIRKSLIGDVSLIHKVFLFLDKWGLINFGAPGLSDSLT 370
           KEYRDFII+K+REDPSRRL F EIRKSL+GDVSL+HKVFLFL++WGLINFGAPG  DS  
Sbjct: 61  KEYRDFIISKYREDPSRRLTFAEIRKSLVGDVSLLHKVFLFLERWGLINFGAPGGEDSAA 120

Query: 371 VNEDEESRKIVYEEGAPNGVRVVAFPNSAKAVTLPTGWSNAGDVIENGFRLPPLASYSDV 550
           V E  E  ++  E+GAPNG+RVVA PNS K +T+P      G+V ENGFRLPPLASYSDV
Sbjct: 121 VAEGAERHRVRSEDGAPNGIRVVAMPNSLKPITMPLTLDVNGEVDENGFRLPPLASYSDV 180

Query: 551 FGDLMRQKSQNGLSCASCGEVCGSNNESNKKENIVACSRCLKNGKDEXXXXXXXXXXXXX 730
           F DL ++K   GL C +CG+ C S + +  K + V C +C KNG                
Sbjct: 181 FSDLTKEK---GLVCGNCGDNCDSGHYNCLKGSPVICVKCFKNGNYGENRSVDDFKFNDC 237

Query: 731 XXXXXNHAADSWTDAETXXXXXXXXXHGDNWDLVAQNVRTKSKSDCIAKLIQLPFGEFML 910
                N  A  WT+AET         HGD+W+LV QNV+TK+K DCI+KLI+LPFGE ML
Sbjct: 238 NENRGNRGA-VWTEAETLLLLESVLKHGDDWELVVQNVQTKTKLDCISKLIELPFGELML 296

Query: 911 STTNGKGDGRNPNNNTV 961
            ++ GK    N N +++
Sbjct: 297 GSSLGKSRASNDNTSSI 313


>ref|XP_004168975.1| PREDICTED: SWI/SNF complex subunit SWI3A-like [Cucumis sativus]
          Length = 566

 Score =  323 bits (829), Expect = 3e-86
 Identities = 161/308 (52%), Positives = 206/308 (66%), Gaps = 1/308 (0%)
 Frame = +2

Query: 53  NEPDHELYTIPSYSSWFSWNDIHETERISFKEFFNGTSISRTPKIYKEYRDFIINKFRED 232
           +EPD +LYTIPS+SSWFSW+DIHETE+++ KEFF+G+SISRTP+IYKEYRDFIINK+RE+
Sbjct: 15  DEPDLDLYTIPSHSSWFSWDDIHETEKLALKEFFDGSSISRTPRIYKEYRDFIINKYREE 74

Query: 233 PSRRLKFTEIRKSLIGDVSLIHKVFLFLDKWGLINFGAPGLSDSLTVNEDEESRKIVYEE 412
           PS RL FTEIRKSL+GDV+L+HKVF FL+ WGLINFGA    D L   ED ES  I  EE
Sbjct: 75  PSSRLTFTEIRKSLVGDVNLLHKVFAFLETWGLINFGATSDDDDLAEVEDGESSVIKIEE 134

Query: 413 GAPNGVRVVAFPNSAKAVTLPTGWSNAGDVIENGFRLPPLASYSDVFGDLMRQKSQNGLS 592
           G PNG+RV A PNS K ++ P    ++  V  +GF+LPPL SYSDVFGDL++QK    L 
Sbjct: 135 GVPNGIRVGAMPNSVKPISAPPVVEDSVIVNGSGFKLPPLTSYSDVFGDLLKQKI---LV 191

Query: 593 CASCGEVCGSNNESNKKENIVACSRCLKNGK-DEXXXXXXXXXXXXXXXXXXNHAADSWT 769
           C +CG++CGS      K++   C  C K+GK  E                  +     WT
Sbjct: 192 CGNCGQLCGSRYHQCAKDDYSICENCFKDGKYGEKRLLEDFELKTTEFTEDRSSTGAVWT 251

Query: 770 DAETXXXXXXXXXHGDNWDLVAQNVRTKSKSDCIAKLIQLPFGEFMLSTTNGKGDGRNPN 949
           +AET         HGD+W+LVAQNV+TK+K DCI K ++LPFG+ +L +   + +   PN
Sbjct: 252 EAETLLLLESVLKHGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSETQRNEVSGPN 311

Query: 950 NNTVNITE 973
           NN  +  E
Sbjct: 312 NNVTSEKE 319


>ref|XP_004138253.1| PREDICTED: SWI/SNF complex subunit SWI3A-like [Cucumis sativus]
          Length = 566

 Score =  323 bits (829), Expect = 3e-86
 Identities = 161/308 (52%), Positives = 206/308 (66%), Gaps = 1/308 (0%)
 Frame = +2

Query: 53  NEPDHELYTIPSYSSWFSWNDIHETERISFKEFFNGTSISRTPKIYKEYRDFIINKFRED 232
           +EPD +LYTIPS+SSWFSW+DIHETE+++ KEFF+G+SISRTP+IYKEYRDFIINK+RE+
Sbjct: 15  DEPDLDLYTIPSHSSWFSWDDIHETEKLALKEFFDGSSISRTPRIYKEYRDFIINKYREE 74

Query: 233 PSRRLKFTEIRKSLIGDVSLIHKVFLFLDKWGLINFGAPGLSDSLTVNEDEESRKIVYEE 412
           PS RL FTEIRKSL+GDV+L+HKVF FL+ WGLINFGA    D L   ED ES  I  EE
Sbjct: 75  PSSRLTFTEIRKSLVGDVNLLHKVFAFLETWGLINFGATSDDDDLAEVEDGESSVIKIEE 134

Query: 413 GAPNGVRVVAFPNSAKAVTLPTGWSNAGDVIENGFRLPPLASYSDVFGDLMRQKSQNGLS 592
           G PNG+RV A PNS K ++ P    ++  V  +GF+LPPL SYSDVFGDL++QK    L 
Sbjct: 135 GVPNGIRVGAMPNSVKPISAPPVVEDSVIVNGSGFKLPPLTSYSDVFGDLLKQKI---LV 191

Query: 593 CASCGEVCGSNNESNKKENIVACSRCLKNGK-DEXXXXXXXXXXXXXXXXXXNHAADSWT 769
           C +CG++CGS      K++   C  C K+GK  E                  +     WT
Sbjct: 192 CGNCGQLCGSRYHQCAKDDYSICENCFKDGKYGEKRLLEDFELKTTEFTEDRSSTGAVWT 251

Query: 770 DAETXXXXXXXXXHGDNWDLVAQNVRTKSKSDCIAKLIQLPFGEFMLSTTNGKGDGRNPN 949
           +AET         HGD+W+LVAQNV+TK+K DCI K ++LPFG+ +L +   + +   PN
Sbjct: 252 EAETLLLLESVLKHGDDWELVAQNVQTKTKLDCILKFVELPFGDSLLCSETQRNEVSGPN 311

Query: 950 NNTVNITE 973
           NN  +  E
Sbjct: 312 NNVTSEKE 319


>ref|XP_003602787.1| SWI/SNF complex subunit SMARCC2 [Medicago truncatula]
           gi|355491835|gb|AES73038.1| SWI/SNF complex subunit
           SMARCC2 [Medicago truncatula]
          Length = 540

 Score =  317 bits (813), Expect = 2e-84
 Identities = 161/310 (51%), Positives = 214/310 (69%), Gaps = 5/310 (1%)
 Frame = +2

Query: 47  PANEPDHELYTIPSYSSWFSWNDIHETERISFKEFFNGTSISRTPKIYKEYRDFIINKFR 226
           P ++ + ELYTIPS S WF+W++IHETE+ +FKE+F+GTSI+RTPKIYKEYRDFIINK+R
Sbjct: 7   PISDSELELYTIPSSSKWFAWDEIHETEKTAFKEYFDGTSITRTPKIYKEYRDFIINKYR 66

Query: 227 EDPSRRLKFTEIRKSLIGDVSLIHKVFLFLDKWGLINFGAPGL-SDSLTVNEDEESR-KI 400
           E+PSRRL FTE+RKSL+GDV+ ++KVFLFL+ WGLIN+GAP   +D     E E+ R K+
Sbjct: 67  EEPSRRLTFTEVRKSLVGDVTFLNKVFLFLECWGLINYGAPSAGNDGEAEKEHEKERCKL 126

Query: 401 VYEEGAPNGVRVVAFPNSAKAVTLPTGW---SNAGDVIENGFRLPPLASYSDVFGDLMRQ 571
             EEGAPNG+RVVA PNS K ++LP      +  GD    G ++ PLASYSDV+GDL+R+
Sbjct: 127 KVEEGAPNGIRVVATPNSLKPISLPRDTKIAAGGGDESGAGVKIAPLASYSDVYGDLIRR 186

Query: 572 KSQNGLSCASCGEVCGSNNESNKKENIVACSRCLKNGKDEXXXXXXXXXXXXXXXXXXNH 751
           K  N   C +CG+ CGS +  + K+N + C++C KNG                     NH
Sbjct: 187 KEVN---CGNCGDKCGSGHYRSTKDNFIICTKCFKNGNYGEKRSMEDFKLNESSEISANH 243

Query: 752 AADSWTDAETXXXXXXXXXHGDNWDLVAQNVRTKSKSDCIAKLIQLPFGEFMLSTTNGKG 931
           +A  WT+ ET         HGD+W+LVAQ+VRTK+K +CI+KLI+LPFGE ML++     
Sbjct: 244 SA-VWTEGETLLLLESVLKHGDDWELVAQSVRTKTKLECISKLIELPFGELMLASVR--- 299

Query: 932 DGRNPNNNTV 961
             RN N+N+V
Sbjct: 300 --RNDNSNSV 307