BLASTX nr result

ID: Cimicifuga21_contig00027189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027189
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20261.3| unnamed protein product [Vitis vinifera]              104   9e-21
ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat...   104   9e-21
emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]   104   9e-21
ref|XP_002317482.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002532249.1| pentatricopeptide repeat-containing protein,...   103   2e-20

>emb|CBI20261.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  104 bits (259), Expect = 9e-21
 Identities = 49/87 (56%), Positives = 64/87 (73%)
 Frame = +1

Query: 1   YNLILKLFLDWNDVQEVRYVWVDMEKNGVGPDQRSYTIMIHRLHKKDRIEEALKCYNEMM 180
           YNLILKL++DW    ++R    +ME+NG+GPDQR+YTIMIH L+ K R+++AL  + +M 
Sbjct: 397 YNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRTYTIMIHGLYDKGRMDDALSYFKQMT 456

Query: 181 SKGMIPEPRTNLLVTTMKAKLKEREDE 261
             GM+PEPRT LLV  M  KLKERE E
Sbjct: 457 LMGMVPEPRTTLLVNAMNIKLKEREAE 483


>ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Vitis vinifera]
          Length = 546

 Score =  104 bits (259), Expect = 9e-21
 Identities = 49/87 (56%), Positives = 64/87 (73%)
 Frame = +1

Query: 1   YNLILKLFLDWNDVQEVRYVWVDMEKNGVGPDQRSYTIMIHRLHKKDRIEEALKCYNEMM 180
           YNLILKL++DW    ++R    +ME+NG+GPDQR+YTIMIH L+ K R+++AL  + +M 
Sbjct: 434 YNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRTYTIMIHGLYDKGRMDDALSYFKQMT 493

Query: 181 SKGMIPEPRTNLLVTTMKAKLKEREDE 261
             GM+PEPRT LLV  M  KLKERE E
Sbjct: 494 LMGMVPEPRTTLLVNAMNIKLKEREAE 520


>emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
          Length = 546

 Score =  104 bits (259), Expect = 9e-21
 Identities = 49/87 (56%), Positives = 64/87 (73%)
 Frame = +1

Query: 1   YNLILKLFLDWNDVQEVRYVWVDMEKNGVGPDQRSYTIMIHRLHKKDRIEEALKCYNEMM 180
           YNLILKL++DW    ++R    +ME+NG+GPDQR+YTIMIH L+ K R+++AL  + +M 
Sbjct: 434 YNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRTYTIMIHGLYDKGRMDDALSYFKQMT 493

Query: 181 SKGMIPEPRTNLLVTTMKAKLKEREDE 261
             GM+PEPRT LLV  M  KLKERE E
Sbjct: 494 LMGMVPEPRTTLLVNAMNIKLKEREAE 520


>ref|XP_002317482.1| predicted protein [Populus trichocarpa] gi|222860547|gb|EEE98094.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score =  103 bits (257), Expect = 1e-20
 Identities = 45/86 (52%), Positives = 65/86 (75%)
 Frame = +1

Query: 4   NLILKLFLDWNDVQEVRYVWVDMEKNGVGPDQRSYTIMIHRLHKKDRIEEALKCYNEMMS 183
           NL+LKL  DW+  ++VRY W +MEKNG+G D+RSYTIMIH L+ K R+E+AL+ + EM +
Sbjct: 319 NLLLKLHADWDSEEKVRYTWEEMEKNGLGLDRRSYTIMIHWLYDKGRVEDALRYFGEMEN 378

Query: 184 KGMIPEPRTNLLVTTMKAKLKEREDE 261
           KGM+PEPRT +L  +M  + ++  +E
Sbjct: 379 KGMVPEPRTKILCNSMNTRKQKEAEE 404


>ref|XP_002532249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528067|gb|EEF30143.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score =  103 bits (256), Expect = 2e-20
 Identities = 48/88 (54%), Positives = 66/88 (75%)
 Frame = +1

Query: 1   YNLILKLFLDWNDVQEVRYVWVDMEKNGVGPDQRSYTIMIHRLHKKDRIEEALKCYNEMM 180
           YNLIL+L+ DW+  + V   W +MEK G+GPD+RSYTIMIH L++K RI +AL  + EM 
Sbjct: 395 YNLILRLYADWDCEERVGDTWNEMEKLGLGPDRRSYTIMIHWLYEKGRINDALHYFGEMT 454

Query: 181 SKGMIPEPRTNLLVTTMKAKLKEREDER 264
           SKGM+ EPRT +LV++M  KLK+ + E+
Sbjct: 455 SKGMVSEPRTEMLVSSMNMKLKDNDAEQ 482


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