BLASTX nr result

ID: Cimicifuga21_contig00027175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027175
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525233.1| Pectinesterase inhibitor, putative [Ricinus ...   136   2e-30
ref|XP_002336925.1| predicted protein [Populus trichocarpa] gi|1...   130   2e-28
ref|XP_002329943.1| predicted protein [Populus trichocarpa] gi|2...   128   9e-28
ref|XP_002310971.1| predicted protein [Populus trichocarpa] gi|2...   126   3e-27
ref|XP_002517758.1| C, putative [Ricinus communis] gi|223543030|...    93   3e-17

>ref|XP_002525233.1| Pectinesterase inhibitor, putative [Ricinus communis]
           gi|223535530|gb|EEF37199.1| Pectinesterase inhibitor,
           putative [Ricinus communis]
          Length = 175

 Score =  136 bits (343), Expect = 2e-30
 Identities = 74/152 (48%), Positives = 94/152 (61%)
 Frame = +3

Query: 96  TLLVDTICKRISNYTFCVDALYSDPRALSPDADSYLLGYISFGLAYLNATATSSLITDLL 275
           T LVD +C++ S+Y+FCV++LYSD R  +PDAD Y L +IS GLAY NAT+T   I++LL
Sbjct: 27  TKLVDKVCQQTSSYSFCVNSLYSDSR--TPDADEYTLAFISVGLAYANATSTRDHISELL 84

Query: 276 HNATHLMQQRLQRCHRDYNKAVYATEEAYNDLNSETYXXXXXXXXXXXXXXXDCELAFNG 455
            N     QQ LQRC R+YNKA+     A NDLNSET+               DC+ AF G
Sbjct: 85  KNHHDHYQQPLQRCVRNYNKAISLLAMADNDLNSETFFELADLANQASRAATDCDAAFKG 144

Query: 456 TGKPSPLTERNKGLRGLCEICVVVSNLFT*LL 551
              P PL  RN  L+ LC+IC ++  LFT LL
Sbjct: 145 IPSP-PLANRNSDLKALCQICGILGKLFTGLL 175


>ref|XP_002336925.1| predicted protein [Populus trichocarpa] gi|118482318|gb|ABK93085.1|
           unknown [Populus trichocarpa]
           gi|222837153|gb|EEE75532.1| predicted protein [Populus
           trichocarpa]
          Length = 184

 Score =  130 bits (326), Expect = 2e-28
 Identities = 76/157 (48%), Positives = 92/157 (58%), Gaps = 2/157 (1%)
 Frame = +3

Query: 78  AQATKPTLLVDTICKRISNYTFCVDALYSDPRALSPDADSYLLGYISFGLAYLNA-TATS 254
           A A KPT LVD +C + SNYT CV+ALYSD R  +PDADSY L +ISFGLAY NA     
Sbjct: 28  AAADKPTELVDKVCNQTSNYTLCVEALYSDSR--TPDADSYTLAFISFGLAYTNANNIRD 85

Query: 255 SLITDLLHN-ATHLMQQRLQRCHRDYNKAVYATEEAYNDLNSETYXXXXXXXXXXXXXXX 431
             I +LL N ++     RL+ C  DY +AV   EEAYNDLNSET+               
Sbjct: 86  YYIAELLKNTSSQDYHYRLETCSHDYLRAVSKLEEAYNDLNSETFFGLAELAGIASEASD 145

Query: 432 DCELAFNGTGKPSPLTERNKGLRGLCEICVVVSNLFT 542
            C+ AF G   P PL  RN  L+ LCEI  +++ LFT
Sbjct: 146 HCQDAFKGISSP-PLGSRNGDLKRLCEIGAIIAKLFT 181


>ref|XP_002329943.1| predicted protein [Populus trichocarpa] gi|222871965|gb|EEF09096.1|
           predicted protein [Populus trichocarpa]
          Length = 186

 Score =  128 bits (321), Expect = 9e-28
 Identities = 72/155 (46%), Positives = 91/155 (58%), Gaps = 6/155 (3%)
 Frame = +3

Query: 96  TLLVDTICKRISNYTFCVDALYSDPRALSPDADSYLLGYISFGLAYLNATATSSLITDLL 275
           T LVD +CK+ S+Y FCV +LYSD R  +P+AD Y L YIS G+AY NAT+T   I+D L
Sbjct: 32  TALVDKVCKQTSSYPFCVRSLYSDSR--TPEADEYTLAYISVGVAYNNATSTQHYISDQL 89

Query: 276 HNAT------HLMQQRLQRCHRDYNKAVYATEEAYNDLNSETYXXXXXXXXXXXXXXXDC 437
            +        H  QQRLQ C R Y +AV A   A+NDL+SET+               DC
Sbjct: 90  RSIKVNGSTHHDQQQRLQMCSRGYQRAVSALAMAHNDLDSETFFELARLAAKASSGANDC 149

Query: 438 ELAFNGTGKPSPLTERNKGLRGLCEICVVVSNLFT 542
           + AF G   P+ L + N+ L  LCEIC VV+ LFT
Sbjct: 150 KAAFKGIPSPTALAKGNQDLVYLCEICGVVAKLFT 184


>ref|XP_002310971.1| predicted protein [Populus trichocarpa] gi|222850791|gb|EEE88338.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score =  126 bits (317), Expect = 3e-27
 Identities = 75/157 (47%), Positives = 91/157 (57%), Gaps = 2/157 (1%)
 Frame = +3

Query: 78  AQATKPTLLVDTICKRISNYTFCVDALYSDPRALSPDADSYLLGYISFGLAYLNA-TATS 254
           A A KPT LVD +C + SNYT CV+ALYSD R  +PDADSY L +ISFGLAY NA     
Sbjct: 28  AAADKPTELVDKVCNQTSNYTLCVEALYSDSR--TPDADSYTLAFISFGLAYTNANNIRD 85

Query: 255 SLITDLLHN-ATHLMQQRLQRCHRDYNKAVYATEEAYNDLNSETYXXXXXXXXXXXXXXX 431
             I +LL N ++     RL+ C  DY +AV   EEAYNDLNSET+               
Sbjct: 86  YYIAELLKNTSSQDYHYRLETCSHDYLRAVSKLEEAYNDLNSETFFGLAELAGIASEASD 145

Query: 432 DCELAFNGTGKPSPLTERNKGLRGLCEICVVVSNLFT 542
            C+ AF G     PL  RN  L+ LCEI  +++ LFT
Sbjct: 146 HCQDAFKGISS-LPLGSRNGDLKRLCEIGAIIAKLFT 181


>ref|XP_002517758.1| C, putative [Ricinus communis] gi|223543030|gb|EEF44565.1| C,
           putative [Ricinus communis]
          Length = 154

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 52/98 (53%), Positives = 63/98 (64%), Gaps = 3/98 (3%)
 Frame = +3

Query: 102 LVDTICKRISNYTFCVDALYSDPRALSPDADSYLLGYISFGLAYLNATATSSLITDLLHN 281
           LVD +C + SNYTFCV +LYSDPR  +PDAD Y L YIS GLAY  ATAT   + +LL N
Sbjct: 33  LVDKVCNQTSNYTFCVGSLYSDPR--TPDADRYTLAYISVGLAYGKATATRDNVAELLKN 90

Query: 282 ---ATHLMQQRLQRCHRDYNKAVYATEEAYNDLNSETY 386
                   +  LQRC  +Y+KAV     A NDLNSE++
Sbjct: 91  IDPGHPDYRHSLQRCAGNYDKAVSLLVVAQNDLNSESF 128


Top