BLASTX nr result

ID: Cimicifuga21_contig00027171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027171
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFR34334.1| hypothetical protein GlmaxMp03 (mitochondrion) [G...    63   4e-08
ref|YP_717108.1| hypothetical protein BrnapMp009 [Brassica napus...    61   2e-07
ref|YP_004927580.1| orf106a (mitochondrion) [Brassica carinata] ...    61   2e-07
ref|YP_004927474.1| orf106a (mitochondrion) [Brassica oleracea] ...    61   2e-07

>gb|AFR34334.1| hypothetical protein GlmaxMp03 (mitochondrion) [Glycine max]
          Length = 150

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 29/35 (82%), Positives = 30/35 (85%)
 Frame = +1

Query: 448 IC*LKPHIKVTGFEPMALCTQNRCADQTALHLVLP 552
           +C    HIKVTGFEPMALCTQNRCADQTALHLV P
Sbjct: 53  LCTSALHIKVTGFEPMALCTQNRCADQTALHLVSP 87


>ref|YP_717108.1| hypothetical protein BrnapMp009 [Brassica napus]
           gi|37591054|dbj|BAC98856.1| hypothetical protein
           [Brassica napus]
          Length = 106

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = -1

Query: 548 KTRCSAVWSAHLFWVQRAIGSNPVTLM*GFS 456
           +TRCSAVWSAHLFWVQRAIGSNPVTLM  FS
Sbjct: 56  ETRCSAVWSAHLFWVQRAIGSNPVTLMSFFS 86


>ref|YP_004927580.1| orf106a (mitochondrion) [Brassica carinata]
           gi|335355041|gb|AEH43595.1| orf106a [Brassica carinata]
          Length = 106

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = -1

Query: 548 KTRCSAVWSAHLFWVQRAIGSNPVTLM*GFS 456
           +TRCSAVWSAHLFWVQRAIGSNPVTLM  FS
Sbjct: 56  ETRCSAVWSAHLFWVQRAIGSNPVTLMSFFS 86


>ref|YP_004927474.1| orf106a (mitochondrion) [Brassica oleracea]
           gi|335354947|gb|AEH43502.1| orf106a [Brassica oleracea]
          Length = 106

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = -1

Query: 548 KTRCSAVWSAHLFWVQRAIGSNPVTLM*GFS 456
           +TRCSAVWSAHLFWVQRAIGSNPVTLM  FS
Sbjct: 56  ETRCSAVWSAHLFWVQRAIGSNPVTLMSFFS 86


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