BLASTX nr result

ID: Cimicifuga21_contig00027161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027161
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264...    65   8e-09
ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago tr...    65   8e-09
emb|CBI37915.3| unnamed protein product [Vitis vinifera]               65   8e-09
emb|CAN77165.1| hypothetical protein VITISV_029834 [Vitis vinifera]    65   8e-09
ref|XP_002448892.1| hypothetical protein SORBIDRAFT_05g000980 [S...    61   8e-08

>ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264071 [Vitis vinifera]
          Length = 1983

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 29/44 (65%), Positives = 37/44 (84%)
 Frame = +3

Query: 171  SGGKELNTLILNDLYYHIQGELEGRMMNSAPFKELAKYMLQLKF 302
            S GKELN LIL+DLYYH+QGEL+GR ++  PFKELA+Y+L  +F
Sbjct: 1237 SEGKELNILILSDLYYHLQGELKGRKIDPGPFKELAQYLLDSQF 1280


>ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago truncatula]
            gi|355508330|gb|AES89472.1| Nucleoporin NUP188-like
            protein [Medicago truncatula]
          Length = 1967

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = +3

Query: 171  SGGKELNTLILNDLYYHIQGELEGRMMNSAPFKELAKYMLQLKF 302
            S GKEL  LILNDLYYH+QGELEGR M   PFKEL++Y+++  F
Sbjct: 1237 SEGKELKKLILNDLYYHLQGELEGRKMGIGPFKELSQYLVESSF 1280


>emb|CBI37915.3| unnamed protein product [Vitis vinifera]
          Length = 1958

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 29/44 (65%), Positives = 37/44 (84%)
 Frame = +3

Query: 171  SGGKELNTLILNDLYYHIQGELEGRMMNSAPFKELAKYMLQLKF 302
            S GKELN LIL+DLYYH+QGEL+GR ++  PFKELA+Y+L  +F
Sbjct: 1260 SEGKELNILILSDLYYHLQGELKGRKIDPGPFKELAQYLLDSQF 1303


>emb|CAN77165.1| hypothetical protein VITISV_029834 [Vitis vinifera]
          Length = 1391

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 29/44 (65%), Positives = 37/44 (84%)
 Frame = +3

Query: 171 SGGKELNTLILNDLYYHIQGELEGRMMNSAPFKELAKYMLQLKF 302
           S GKELN LIL+DLYYH+QGEL+GR ++  PFKELA+Y+L  +F
Sbjct: 641 SEGKELNILILSDLYYHLQGELKGRKIDPGPFKELAQYLLDSQF 684


>ref|XP_002448892.1| hypothetical protein SORBIDRAFT_05g000980 [Sorghum bicolor]
           gi|241934735|gb|EES07880.1| hypothetical protein
           SORBIDRAFT_05g000980 [Sorghum bicolor]
          Length = 773

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 26/43 (60%), Positives = 35/43 (81%)
 Frame = +3

Query: 171 SGGKELNTLILNDLYYHIQGELEGRMMNSAPFKELAKYMLQLK 299
           SG +ELN L++NDLYYHI GELEGR ++S PF+EL  ++L+ K
Sbjct: 30  SGEQELNNLVINDLYYHICGELEGRQISSGPFQELLSFLLEFK 72


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