BLASTX nr result
ID: Cimicifuga21_contig00027138
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00027138 (682 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFG58067.1| hypothetical protein 0_13343_01, partial [Pinus t... 77 3e-12 gb|EAZ05652.1| hypothetical protein OsI_27879 [Oryza sativa Indi... 77 4e-12 ref|XP_003571456.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 76 5e-12 ref|XP_002317051.1| predicted protein [Populus trichocarpa] gi|2... 76 5e-12 gb|ABK96609.1| unknown [Populus trichocarpa x Populus deltoides] 76 5e-12 >gb|AFG58067.1| hypothetical protein 0_13343_01, partial [Pinus taeda] Length = 102 Score = 77.0 bits (188), Expect = 3e-12 Identities = 37/97 (38%), Positives = 55/97 (56%) Frame = -1 Query: 424 IKNKLPVVTFGDFQDRWRAPXXXXXXSYNSNEDSICAICLCHMERWHEMRELPNCLHAFH 245 I++ LPVV FG + + D +CA+CL +ME++ E+R L NC H FH Sbjct: 2 IRDLLPVVEFGVLAEG------------AEDGDVMCAVCLNNMEKFEEIRRLTNCRHIFH 49 Query: 244 RNCLDKWMDQHRITCPTCRSNLISFQHQEDSSIPTAT 134 R CLDKW+D + TCP CRS L+ + + + ++ T Sbjct: 50 RGCLDKWLDHDQRTCPLCRSPLLPDEIEREINVELRT 86 >gb|EAZ05652.1| hypothetical protein OsI_27879 [Oryza sativa Indica Group] Length = 176 Score = 76.6 bits (187), Expect = 4e-12 Identities = 38/97 (39%), Positives = 54/97 (55%) Frame = -1 Query: 424 IKNKLPVVTFGDFQDRWRAPXXXXXXSYNSNEDSICAICLCHMERWHEMRELPNCLHAFH 245 IK +LP V + DF RA + CA+CL +E H +REL NC HAFH Sbjct: 81 IKARLPAVRYADFVRCRRAAAAAA---------ASCAVCLGALEARHRVRELGNCAHAFH 131 Query: 244 RNCLDKWMDQHRITCPTCRSNLISFQHQEDSSIPTAT 134 + C+DKW+D+ + TCP CR+ L+ +D++ AT Sbjct: 132 KACIDKWVDKGQATCPLCRAALLPSADDDDAAAIAAT 168 >ref|XP_003571456.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Brachypodium distachyon] Length = 184 Score = 76.3 bits (186), Expect = 5e-12 Identities = 36/94 (38%), Positives = 52/94 (55%) Frame = -1 Query: 424 IKNKLPVVTFGDFQDRWRAPXXXXXXSYNSNEDSICAICLCHMERWHEMRELPNCLHAFH 245 IK +LP V + D + R A N+ + CA+CL +E H +REL NC HAFH Sbjct: 84 IKARLPAVRYADLRSRRGAG--------NAPAPACCAVCLGALEARHRVRELGNCAHAFH 135 Query: 244 RNCLDKWMDQHRITCPTCRSNLISFQHQEDSSIP 143 + C+DKW+D+ + TCP CR+ L+ +P Sbjct: 136 KACIDKWVDKGQATCPLCRALLLPAAEDAAGKLP 169 >ref|XP_002317051.1| predicted protein [Populus trichocarpa] gi|222860116|gb|EEE97663.1| predicted protein [Populus trichocarpa] Length = 180 Score = 76.3 bits (186), Expect = 5e-12 Identities = 35/82 (42%), Positives = 48/82 (58%) Frame = -1 Query: 424 IKNKLPVVTFGDFQDRWRAPXXXXXXSYNSNEDSICAICLCHMERWHEMRELPNCLHAFH 245 IK KLPV+ F +R +++S+C +CL ++ E+REL NC H FH Sbjct: 82 IKKKLPVMAFSSLLER--------LVKLEDDQESMCPVCLDCIQERDEVRELCNCSHVFH 133 Query: 244 RNCLDKWMDQHRITCPTCRSNL 179 CLD W+DQ ++TCPTCRS L Sbjct: 134 MKCLDSWVDQGQVTCPTCRSML 155 >gb|ABK96609.1| unknown [Populus trichocarpa x Populus deltoides] Length = 180 Score = 76.3 bits (186), Expect = 5e-12 Identities = 35/82 (42%), Positives = 48/82 (58%) Frame = -1 Query: 424 IKNKLPVVTFGDFQDRWRAPXXXXXXSYNSNEDSICAICLCHMERWHEMRELPNCLHAFH 245 IK KLPV+ F +R +++S+C +CL ++ E+REL NC H FH Sbjct: 82 IKKKLPVMAFSSLLER--------LVKLEDDQESMCPVCLDCIQERDEVRELCNCSHVFH 133 Query: 244 RNCLDKWMDQHRITCPTCRSNL 179 CLD W+DQ ++TCPTCRS L Sbjct: 134 MKCLDSWVDQGQVTCPTCRSML 155