BLASTX nr result

ID: Cimicifuga21_contig00027138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027138
         (682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFG58067.1| hypothetical protein 0_13343_01, partial [Pinus t...    77   3e-12
gb|EAZ05652.1| hypothetical protein OsI_27879 [Oryza sativa Indi...    77   4e-12
ref|XP_003571456.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...    76   5e-12
ref|XP_002317051.1| predicted protein [Populus trichocarpa] gi|2...    76   5e-12
gb|ABK96609.1| unknown [Populus trichocarpa x Populus deltoides]       76   5e-12

>gb|AFG58067.1| hypothetical protein 0_13343_01, partial [Pinus taeda]
          Length = 102

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 37/97 (38%), Positives = 55/97 (56%)
 Frame = -1

Query: 424 IKNKLPVVTFGDFQDRWRAPXXXXXXSYNSNEDSICAICLCHMERWHEMRELPNCLHAFH 245
           I++ LPVV FG   +               + D +CA+CL +ME++ E+R L NC H FH
Sbjct: 2   IRDLLPVVEFGVLAEG------------AEDGDVMCAVCLNNMEKFEEIRRLTNCRHIFH 49

Query: 244 RNCLDKWMDQHRITCPTCRSNLISFQHQEDSSIPTAT 134
           R CLDKW+D  + TCP CRS L+  + + + ++   T
Sbjct: 50  RGCLDKWLDHDQRTCPLCRSPLLPDEIEREINVELRT 86


>gb|EAZ05652.1| hypothetical protein OsI_27879 [Oryza sativa Indica Group]
          Length = 176

 Score = 76.6 bits (187), Expect = 4e-12
 Identities = 38/97 (39%), Positives = 54/97 (55%)
 Frame = -1

Query: 424 IKNKLPVVTFGDFQDRWRAPXXXXXXSYNSNEDSICAICLCHMERWHEMRELPNCLHAFH 245
           IK +LP V + DF    RA              + CA+CL  +E  H +REL NC HAFH
Sbjct: 81  IKARLPAVRYADFVRCRRAAAAAA---------ASCAVCLGALEARHRVRELGNCAHAFH 131

Query: 244 RNCLDKWMDQHRITCPTCRSNLISFQHQEDSSIPTAT 134
           + C+DKW+D+ + TCP CR+ L+     +D++   AT
Sbjct: 132 KACIDKWVDKGQATCPLCRAALLPSADDDDAAAIAAT 168


>ref|XP_003571456.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Brachypodium
           distachyon]
          Length = 184

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 36/94 (38%), Positives = 52/94 (55%)
 Frame = -1

Query: 424 IKNKLPVVTFGDFQDRWRAPXXXXXXSYNSNEDSICAICLCHMERWHEMRELPNCLHAFH 245
           IK +LP V + D + R  A         N+   + CA+CL  +E  H +REL NC HAFH
Sbjct: 84  IKARLPAVRYADLRSRRGAG--------NAPAPACCAVCLGALEARHRVRELGNCAHAFH 135

Query: 244 RNCLDKWMDQHRITCPTCRSNLISFQHQEDSSIP 143
           + C+DKW+D+ + TCP CR+ L+         +P
Sbjct: 136 KACIDKWVDKGQATCPLCRALLLPAAEDAAGKLP 169


>ref|XP_002317051.1| predicted protein [Populus trichocarpa] gi|222860116|gb|EEE97663.1|
           predicted protein [Populus trichocarpa]
          Length = 180

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 35/82 (42%), Positives = 48/82 (58%)
 Frame = -1

Query: 424 IKNKLPVVTFGDFQDRWRAPXXXXXXSYNSNEDSICAICLCHMERWHEMRELPNCLHAFH 245
           IK KLPV+ F    +R              +++S+C +CL  ++   E+REL NC H FH
Sbjct: 82  IKKKLPVMAFSSLLER--------LVKLEDDQESMCPVCLDCIQERDEVRELCNCSHVFH 133

Query: 244 RNCLDKWMDQHRITCPTCRSNL 179
             CLD W+DQ ++TCPTCRS L
Sbjct: 134 MKCLDSWVDQGQVTCPTCRSML 155


>gb|ABK96609.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 180

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 35/82 (42%), Positives = 48/82 (58%)
 Frame = -1

Query: 424 IKNKLPVVTFGDFQDRWRAPXXXXXXSYNSNEDSICAICLCHMERWHEMRELPNCLHAFH 245
           IK KLPV+ F    +R              +++S+C +CL  ++   E+REL NC H FH
Sbjct: 82  IKKKLPVMAFSSLLER--------LVKLEDDQESMCPVCLDCIQERDEVRELCNCSHVFH 133

Query: 244 RNCLDKWMDQHRITCPTCRSNL 179
             CLD W+DQ ++TCPTCRS L
Sbjct: 134 MKCLDSWVDQGQVTCPTCRSML 155


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