BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027120
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   426   e-117
emb|CBI32069.3| unnamed protein product [Vitis vinifera]              426   e-117
gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benth...   426   e-117
ref|XP_002520197.1| helicase, putative [Ricinus communis] gi|223...   404   e-111
ref|XP_002315703.1| predicted protein [Populus trichocarpa] gi|2...   394   e-107

>ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
            chloroplastic-like [Vitis vinifera]
          Length = 1174

 Score =  426 bits (1096), Expect = e-117
 Identities = 213/266 (80%), Positives = 239/266 (89%)
 Frame = -2

Query: 800  PNVPLAQGDALPREIIWRLLDKEQIQLEKLSESEFGGLWCMEGSLETWSWSLNVPVLNSL 621
            PNV LAQGDALPREI+  LLDK  IQ E+L++SE GGLWC+EGSLETWSWSLNVPVL+SL
Sbjct: 843  PNVALAQGDALPREIMRALLDKADIQWEELAKSELGGLWCIEGSLETWSWSLNVPVLSSL 902

Query: 620  SGDNEMLQMSQTYNDAVECYKEQRNKVSRLKKKIARTDGFREYKKIIDITNFTREKIERL 441
            S D+E+L+MSQ Y +AVECYKEQRNKVSRLKKKIART+GF+EYKKIID++ FT EKI+RL
Sbjct: 903  SEDDEVLKMSQAYYEAVECYKEQRNKVSRLKKKIARTEGFKEYKKIIDMSKFTEEKIKRL 962

Query: 440  KARSNRLVGRIEQIEPSGWKEFLQISQVIHEARALDINTHMIFPLGETAAAIRGENELWL 261
            KARSNRL  RIEQIEPSGWKEFLQ+S VIHE RALDINTH+IFPLGETAAAIRGENELWL
Sbjct: 963  KARSNRLSSRIEQIEPSGWKEFLQVSNVIHETRALDINTHIIFPLGETAAAIRGENELWL 1022

Query: 260  AIVLRNKILLELQPAQLAGVCGGLVSEGIRVRPVKNDSYIYEPSTAVINIIDLLDEQRSS 81
            A+VLR+K+LL L+PAQLA VCG LVSEGI+VRP KN+SYIYE ST VIN+I LLDEQR+S
Sbjct: 1023 AMVLRSKVLLGLKPAQLAAVCGSLVSEGIKVRPWKNNSYIYEASTTVINVISLLDEQRNS 1082

Query: 80   FLQLQEKHGVKISCGLDSQFSGMVEA 3
             LQLQEKH V+I C LDSQFSGMVEA
Sbjct: 1083 LLQLQEKHDVQIPCCLDSQFSGMVEA 1108


>emb|CBI32069.3| unnamed protein product [Vitis vinifera]
          Length = 1064

 Score =  426 bits (1096), Expect = e-117
 Identities = 213/266 (80%), Positives = 239/266 (89%)
 Frame = -2

Query: 800  PNVPLAQGDALPREIIWRLLDKEQIQLEKLSESEFGGLWCMEGSLETWSWSLNVPVLNSL 621
            PNV LAQGDALPREI+  LLDK  IQ E+L++SE GGLWC+EGSLETWSWSLNVPVL+SL
Sbjct: 733  PNVALAQGDALPREIMRALLDKADIQWEELAKSELGGLWCIEGSLETWSWSLNVPVLSSL 792

Query: 620  SGDNEMLQMSQTYNDAVECYKEQRNKVSRLKKKIARTDGFREYKKIIDITNFTREKIERL 441
            S D+E+L+MSQ Y +AVECYKEQRNKVSRLKKKIART+GF+EYKKIID++ FT EKI+RL
Sbjct: 793  SEDDEVLKMSQAYYEAVECYKEQRNKVSRLKKKIARTEGFKEYKKIIDMSKFTEEKIKRL 852

Query: 440  KARSNRLVGRIEQIEPSGWKEFLQISQVIHEARALDINTHMIFPLGETAAAIRGENELWL 261
            KARSNRL  RIEQIEPSGWKEFLQ+S VIHE RALDINTH+IFPLGETAAAIRGENELWL
Sbjct: 853  KARSNRLSSRIEQIEPSGWKEFLQVSNVIHETRALDINTHIIFPLGETAAAIRGENELWL 912

Query: 260  AIVLRNKILLELQPAQLAGVCGGLVSEGIRVRPVKNDSYIYEPSTAVINIIDLLDEQRSS 81
            A+VLR+K+LL L+PAQLA VCG LVSEGI+VRP KN+SYIYE ST VIN+I LLDEQR+S
Sbjct: 913  AMVLRSKVLLGLKPAQLAAVCGSLVSEGIKVRPWKNNSYIYEASTTVINVISLLDEQRNS 972

Query: 80   FLQLQEKHGVKISCGLDSQFSGMVEA 3
             LQLQEKH V+I C LDSQFSGMVEA
Sbjct: 973  LLQLQEKHDVQIPCCLDSQFSGMVEA 998


>gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benthamiana]
          Length = 1159

 Score =  426 bits (1094), Expect = e-117
 Identities = 206/266 (77%), Positives = 240/266 (90%)
 Frame = -2

Query: 800  PNVPLAQGDALPREIIWRLLDKEQIQLEKLSESEFGGLWCMEGSLETWSWSLNVPVLNSL 621
            PNV LA GDALPREI+  LLDK ++Q +KL+ SE GGLWC+EGSLETWSWSLNVPVL+SL
Sbjct: 828  PNVALALGDALPREIMTELLDKAEMQWQKLAVSELGGLWCLEGSLETWSWSLNVPVLSSL 887

Query: 620  SGDNEMLQMSQTYNDAVECYKEQRNKVSRLKKKIARTDGFREYKKIIDITNFTREKIERL 441
            S ++E+LQ+SQ YNDAVECYK QRNKVSRLKK+IART+GF+EYKKIID   FT+EKI RL
Sbjct: 888  SEEDEVLQLSQAYNDAVECYKNQRNKVSRLKKRIARTEGFKEYKKIIDSAKFTQEKIRRL 947

Query: 440  KARSNRLVGRIEQIEPSGWKEFLQISQVIHEARALDINTHMIFPLGETAAAIRGENELWL 261
            K RS RL+GRIEQIEP+GWKEFLQ+S VIHE+RALDINTH+IFPLGETAAAIRGENELWL
Sbjct: 948  KVRSKRLIGRIEQIEPTGWKEFLQVSNVIHESRALDINTHVIFPLGETAAAIRGENELWL 1007

Query: 260  AIVLRNKILLELQPAQLAGVCGGLVSEGIRVRPVKNDSYIYEPSTAVINIIDLLDEQRSS 81
            A+VLRNK+LL+L+PAQLA VCG LVSEGIR+RP KN+S++YEPST V+N+IDLL+E +SS
Sbjct: 1008 AMVLRNKLLLDLKPAQLAAVCGSLVSEGIRLRPWKNNSFVYEPSTTVLNVIDLLEETKSS 1067

Query: 80   FLQLQEKHGVKISCGLDSQFSGMVEA 3
             L+LQEKHGV+I C LDSQFSGMVEA
Sbjct: 1068 ILELQEKHGVQIPCCLDSQFSGMVEA 1093


>ref|XP_002520197.1| helicase, putative [Ricinus communis] gi|223540689|gb|EEF42252.1|
            helicase, putative [Ricinus communis]
          Length = 1161

 Score =  404 bits (1039), Expect = e-111
 Identities = 203/266 (76%), Positives = 236/266 (88%)
 Frame = -2

Query: 800  PNVPLAQGDALPREIIWRLLDKEQIQLEKLSESEFGGLWCMEGSLETWSWSLNVPVLNSL 621
            PNV LAQGDA+PRE++ +LLDKE+ Q EKL++SE GGLW MEGSLETWSWSLNVPVLNSL
Sbjct: 830  PNVALAQGDAVPREVMRKLLDKEEKQWEKLADSELGGLWYMEGSLETWSWSLNVPVLNSL 889

Query: 620  SGDNEMLQMSQTYNDAVECYKEQRNKVSRLKKKIARTDGFREYKKIIDITNFTREKIERL 441
            S ++E+L  SQ Y+DAVE YK QR KV+RLKKKIART+GFREYKKI+D  +FT +KI+RL
Sbjct: 890  SENDEVLHGSQAYHDAVEHYKGQRTKVARLKKKIARTEGFREYKKILDWKSFTEDKIKRL 949

Query: 440  KARSNRLVGRIEQIEPSGWKEFLQISQVIHEARALDINTHMIFPLGETAAAIRGENELWL 261
            KARSNRL+ RIE+IEPSGWKEFL+IS V+HE RALDINT +IFPLGETAAAIRGENELWL
Sbjct: 950  KARSNRLINRIEEIEPSGWKEFLKISNVVHEIRALDINTQVIFPLGETAAAIRGENELWL 1009

Query: 260  AIVLRNKILLELQPAQLAGVCGGLVSEGIRVRPVKNDSYIYEPSTAVINIIDLLDEQRSS 81
            A+VLR+KILL+L+PAQLA VC  +VSEGI+VR  +N+SYIYEPS+AV NII  L+EQRSS
Sbjct: 1010 AMVLRSKILLDLKPAQLAAVCASVVSEGIKVRAWENNSYIYEPSSAVFNIIGKLEEQRSS 1069

Query: 80   FLQLQEKHGVKISCGLDSQFSGMVEA 3
             LQLQEKHGV+ISC LDSQFSGMVEA
Sbjct: 1070 LLQLQEKHGVEISCYLDSQFSGMVEA 1095


>ref|XP_002315703.1| predicted protein [Populus trichocarpa] gi|222864743|gb|EEF01874.1|
            predicted protein [Populus trichocarpa]
          Length = 736

 Score =  394 bits (1012), Expect = e-107
 Identities = 192/267 (71%), Positives = 235/267 (88%)
 Frame = -2

Query: 803  LPNVPLAQGDALPREIIWRLLDKEQIQLEKLSESEFGGLWCMEGSLETWSWSLNVPVLNS 624
            LPNV L+ GD LP E++W LLD+E+ Q EKL+ESE GGLW MEGSLETWSWSLNVPVLNS
Sbjct: 404  LPNVALSLGDDLPHEVMWMLLDREEKQWEKLAESELGGLWYMEGSLETWSWSLNVPVLNS 463

Query: 623  LSGDNEMLQMSQTYNDAVECYKEQRNKVSRLKKKIARTDGFREYKKIIDITNFTREKIER 444
            LS  +E+L MSQ Y+DAVE YK+QRNKV+RLKK IART+GF+EYK+I+D  NFT +KI+R
Sbjct: 464  LSEIDEVLHMSQAYHDAVESYKDQRNKVARLKKTIARTEGFKEYKRILDWKNFTEDKIKR 523

Query: 443  LKARSNRLVGRIEQIEPSGWKEFLQISQVIHEARALDINTHMIFPLGETAAAIRGENELW 264
            LK RSNRL  R+++IEPSGWKEFL+IS V+HE+RALDINT +IFPLGETAAAIRGENELW
Sbjct: 524  LKMRSNRLSERLQEIEPSGWKEFLKISNVVHESRALDINTQVIFPLGETAAAIRGENELW 583

Query: 263  LAIVLRNKILLELQPAQLAGVCGGLVSEGIRVRPVKNDSYIYEPSTAVINIIDLLDEQRS 84
            LA+VLR++ILL+L+P QLA VC  +VSEGI+VR  +N++YIYEPS+AVIN+I++L+EQRS
Sbjct: 584  LAMVLRSRILLDLKPGQLAAVCASVVSEGIKVRAWENNNYIYEPSSAVINVINILNEQRS 643

Query: 83   SFLQLQEKHGVKISCGLDSQFSGMVEA 3
            +  +LQEKHGV+I+C LDSQFSGMVEA
Sbjct: 644  NLSKLQEKHGVEITCCLDSQFSGMVEA 670