BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027101
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containi...   111   5e-23
ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]   109   3e-22
emb|CBI22140.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_003634255.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   102   4e-20

>ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
           gi|296083555|emb|CBI23551.3| unnamed protein product
           [Vitis vinifera]
          Length = 580

 Score =  111 bits (278), Expect = 5e-23
 Identities = 50/72 (69%), Positives = 61/72 (84%)
 Frame = -3

Query: 216 ISGYAKAGDVEKANALFDQMPERNSASWNAMISGYTDRAEMDVARKLFNEMPQRSNVSWI 37
           ISGYA+AGD+EKA +LF QMPERN ASWNAMISGY +  ++D AR  F+ MPQR+NVSW+
Sbjct: 212 ISGYARAGDMEKALSLFQQMPERNFASWNAMISGYVEFGDIDSARSFFDAMPQRNNVSWM 271

Query: 36  AMISGYSRCGDI 1
            MISGYS+CGD+
Sbjct: 272 TMISGYSKCGDV 283



 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 34/69 (49%), Positives = 52/69 (75%)
 Frame = -3

Query: 207 YAKAGDVEKANALFDQMPERNSASWNAMISGYTDRAEMDVARKLFNEMPQRSNVSWIAMI 28
           Y K GD+E A  +FD+M ERN  SWN+M++GY    ++ VA+++F+E+PQ+  +SW +MI
Sbjct: 153 YCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVISWNSMI 212

Query: 27  SGYSRCGDI 1
           SGY+R GD+
Sbjct: 213 SGYARAGDM 221



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 35/72 (48%), Positives = 51/72 (70%)
 Frame = -3

Query: 216 ISGYAKAGDVEKANALFDQMPERNSASWNAMISGYTDRAEMDVARKLFNEMPQRSNVSWI 37
           ++GY K+GD+  A  +FD++P+++  SWN+MISGY    +M+ A  LF +MP+R+  SW 
Sbjct: 181 LAGYLKSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKALSLFQQMPERNFASWN 240

Query: 36  AMISGYSRCGDI 1
           AMISGY   GDI
Sbjct: 241 AMISGYVEFGDI 252



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/68 (41%), Positives = 47/68 (69%)
 Frame = -3

Query: 216 ISGYAKAGDVEKANALFDQMPERNSASWNAMISGYTDRAEMDVARKLFNEMPQRSNVSWI 37
           ISGY + GD++ A + FD MP+RN+ SW  MISGY+   ++D A +LF+++  +  + + 
Sbjct: 243 ISGYVEFGDIDSARSFFDAMPQRNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFN 302

Query: 36  AMISGYSR 13
           AMI+ Y++
Sbjct: 303 AMIACYAQ 310


>ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
          Length = 580

 Score =  110 bits (274), Expect = 2e-22
 Identities = 48/72 (66%), Positives = 62/72 (86%)
 Frame = -3

Query: 216 ISGYAKAGDVEKANALFDQMPERNSASWNAMISGYTDRAEMDVARKLFNEMPQRSNVSWI 37
           ISGYA+AGD+EKA++LF QMPERN ASWNAMISG+ +  ++D AR  F+ MPQ++NVSW+
Sbjct: 212 ISGYARAGDMEKASSLFQQMPERNFASWNAMISGHVEFGDIDSARSFFDAMPQKNNVSWM 271

Query: 36  AMISGYSRCGDI 1
            MISGYS+CGD+
Sbjct: 272 TMISGYSKCGDV 283



 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 34/69 (49%), Positives = 52/69 (75%)
 Frame = -3

Query: 207 YAKAGDVEKANALFDQMPERNSASWNAMISGYTDRAEMDVARKLFNEMPQRSNVSWIAMI 28
           Y K GD+E A  +FD+M ERN  SWN+M++GY    ++ VA+++F+E+PQ+  +SW +MI
Sbjct: 153 YCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVISWNSMI 212

Query: 27  SGYSRCGDI 1
           SGY+R GD+
Sbjct: 213 SGYARAGDM 221



 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 34/72 (47%), Positives = 51/72 (70%)
 Frame = -3

Query: 216 ISGYAKAGDVEKANALFDQMPERNSASWNAMISGYTDRAEMDVARKLFNEMPQRSNVSWI 37
           ++GY K+GD+  A  +FD++P+++  SWN+MISGY    +M+ A  LF +MP+R+  SW 
Sbjct: 181 LAGYLKSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKASSLFQQMPERNFASWN 240

Query: 36  AMISGYSRCGDI 1
           AMISG+   GDI
Sbjct: 241 AMISGHVEFGDI 252



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/68 (38%), Positives = 47/68 (69%)
 Frame = -3

Query: 216 ISGYAKAGDVEKANALFDQMPERNSASWNAMISGYTDRAEMDVARKLFNEMPQRSNVSWI 37
           ISG+ + GD++ A + FD MP++N+ SW  MISGY+   ++D A +LF+++  +  + + 
Sbjct: 243 ISGHVEFGDIDSARSFFDAMPQKNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFN 302

Query: 36  AMISGYSR 13
           AMI+ Y++
Sbjct: 303 AMIACYAQ 310


>emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]
          Length = 841

 Score =  109 bits (272), Expect = 3e-22
 Identities = 49/72 (68%), Positives = 60/72 (83%)
 Frame = -3

Query: 216 ISGYAKAGDVEKANALFDQMPERNSASWNAMISGYTDRAEMDVARKLFNEMPQRSNVSWI 37
           ISGYA+AGD+EKA +LF QMPERN ASWNAMISGY +  ++D AR  F+ MPQ +NVSW+
Sbjct: 208 ISGYARAGDMEKALSLFQQMPERNFASWNAMISGYVEFGDIDSARSFFDAMPQXNNVSWM 267

Query: 36  AMISGYSRCGDI 1
            MISGYS+CGD+
Sbjct: 268 TMISGYSKCGDV 279



 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 34/69 (49%), Positives = 52/69 (75%)
 Frame = -3

Query: 207 YAKAGDVEKANALFDQMPERNSASWNAMISGYTDRAEMDVARKLFNEMPQRSNVSWIAMI 28
           Y K GD+E A  +FD+M ERN  SWN+M++GY    ++ VA+++F+E+PQ+  +SW +MI
Sbjct: 149 YCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVISWNSMI 208

Query: 27  SGYSRCGDI 1
           SGY+R GD+
Sbjct: 209 SGYARAGDM 217



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 35/72 (48%), Positives = 51/72 (70%)
 Frame = -3

Query: 216 ISGYAKAGDVEKANALFDQMPERNSASWNAMISGYTDRAEMDVARKLFNEMPQRSNVSWI 37
           ++GY K+GD+  A  +FD++P+++  SWN+MISGY    +M+ A  LF +MP+R+  SW 
Sbjct: 177 LAGYLKSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKALSLFQQMPERNFASWN 236

Query: 36  AMISGYSRCGDI 1
           AMISGY   GDI
Sbjct: 237 AMISGYVEFGDI 248



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/68 (39%), Positives = 46/68 (67%)
 Frame = -3

Query: 216 ISGYAKAGDVEKANALFDQMPERNSASWNAMISGYTDRAEMDVARKLFNEMPQRSNVSWI 37
           ISGY + GD++ A + FD MP+ N+ SW  MISGY+   ++D A +LF+++  +  + + 
Sbjct: 239 ISGYVEFGDIDSARSFFDAMPQXNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFN 298

Query: 36  AMISGYSR 13
           AMI+ Y++
Sbjct: 299 AMIACYAQ 306


>emb|CBI22140.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score =  107 bits (267), Expect = 1e-21
 Identities = 46/72 (63%), Positives = 61/72 (84%)
 Frame = -3

Query: 216 ISGYAKAGDVEKANALFDQMPERNSASWNAMISGYTDRAEMDVARKLFNEMPQRSNVSWI 37
           ++GY KAGD+EKA++LF QMPERN ASWNAMISG+ +  ++D AR  F+ MPQ++NVSW+
Sbjct: 60  LAGYLKAGDMEKASSLFQQMPERNFASWNAMISGHVEFGDIDSARSFFDAMPQKNNVSWM 119

Query: 36  AMISGYSRCGDI 1
            MISGYS+CGD+
Sbjct: 120 TMISGYSKCGDV 131



 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 35/69 (50%), Positives = 47/69 (68%)
 Frame = -3

Query: 207 YAKAGDVEKANALFDQMPERNSASWNAMISGYTDRAEMDVARKLFNEMPQRSNVSWIAMI 28
           Y K GD+E A  +FD+M ERN  SWN+M++GY    +M+ A  LF +MP+R+  SW AMI
Sbjct: 32  YCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKAGDMEKASSLFQQMPERNFASWNAMI 91

Query: 27  SGYSRCGDI 1
           SG+   GDI
Sbjct: 92  SGHVEFGDI 100



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/68 (38%), Positives = 47/68 (69%)
 Frame = -3

Query: 216 ISGYAKAGDVEKANALFDQMPERNSASWNAMISGYTDRAEMDVARKLFNEMPQRSNVSWI 37
           ISG+ + GD++ A + FD MP++N+ SW  MISGY+   ++D A +LF+++  +  + + 
Sbjct: 91  ISGHVEFGDIDSARSFFDAMPQKNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFN 150

Query: 36  AMISGYSR 13
           AMI+ Y++
Sbjct: 151 AMIACYAQ 158


>ref|XP_003634255.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g22760-like [Vitis vinifera]
          Length = 583

 Score =  102 bits (253), Expect = 4e-20
 Identities = 43/71 (60%), Positives = 59/71 (83%)
 Frame = -3

Query: 213 SGYAKAGDVEKANALFDQMPERNSASWNAMISGYTDRAEMDVARKLFNEMPQRSNVSWIA 34
           S YA++GD+EKA++LF QMPERN ASWNAMI+GY +  +++ AR  F+ MPQR++ SW+ 
Sbjct: 195 SXYARSGDLEKASSLFQQMPERNFASWNAMINGYVEFGDLESARSFFDAMPQRNSASWMT 254

Query: 33  MISGYSRCGDI 1
           MISGYS+CGD+
Sbjct: 255 MISGYSKCGDV 265



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 29/72 (40%), Positives = 48/72 (66%)
 Frame = -3

Query: 216 ISGYAKAGDVEKANALFDQMPERNSASWNAMISGYTDRAEMDVARKLFNEMPQRSNVSWI 37
           ++G  K+GD+  A  +FD++P+++  SWN+M S Y    +++ A  LF +MP+R+  SW 
Sbjct: 163 LAGCLKSGDLAVAQRVFDEIPQKDVISWNSMFSXYARSGDLEKASSLFQQMPERNFASWN 222

Query: 36  AMISGYSRCGDI 1
           AMI+GY   GD+
Sbjct: 223 AMINGYVEFGDL 234



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/68 (42%), Positives = 48/68 (70%)
 Frame = -3

Query: 216 ISGYAKAGDVEKANALFDQMPERNSASWNAMISGYTDRAEMDVARKLFNEMPQRSNVSWI 37
           I+GY + GD+E A + FD MP+RNSASW  MISGY+   ++D A +LF+++  +  + + 
Sbjct: 225 INGYVEFGDLESARSFFDAMPQRNSASWMTMISGYSKCGDVDSACELFDQVGGKDLLLFN 284

Query: 36  AMISGYSR 13
           A+I+ Y++
Sbjct: 285 AVIACYAQ 292