BLASTX nr result

ID: Cimicifuga21_contig00027096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027096
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284605.1| PREDICTED: multiprotein-bridging factor 1c [...   147   1e-33
emb|CAN79519.1| hypothetical protein VITISV_034625 [Vitis vinifera]   146   2e-33
ref|XP_002514331.1| Multiprotein-bridging factor, putative [Rici...   146   2e-33
ref|XP_002324409.1| predicted protein [Populus trichocarpa] gi|2...   145   5e-33
gb|AAL32037.2|AF439278_1 ethylene-responsive transciptional coac...   145   5e-33

>ref|XP_002284605.1| PREDICTED: multiprotein-bridging factor 1c [Vitis vinifera]
          Length = 144

 Score =  147 bits (370), Expect = 1e-33
 Identities = 76/109 (69%), Positives = 88/109 (80%)
 Frame = -2

Query: 533 QALRSGAAISTVKKTDAGTNKKAAPVVNVWKLVDAAEPAAFERVSSDVRQAIQKARLDKK 354
           +A+RSGA + T+KK D G NKKAAP++N  KL +  EPAA +RVS DVRQ IQKARL+KK
Sbjct: 36  KAIRSGAPVQTLKKFDGGANKKAAPIMNTRKLDEGTEPAALDRVSVDVRQLIQKARLEKK 95

Query: 353 WSQAELAKRINEKPAVVQEYESGKAVPTQNVLQQMEKHLGVKLRGKIGK 207
            SQAELAK INE+P VVQEYE+GKAVP Q VL +MEK LGVKLRGKI K
Sbjct: 96  MSQAELAKLINERPQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGKISK 144


>emb|CAN79519.1| hypothetical protein VITISV_034625 [Vitis vinifera]
          Length = 144

 Score =  146 bits (369), Expect = 2e-33
 Identities = 76/109 (69%), Positives = 87/109 (79%)
 Frame = -2

Query: 533 QALRSGAAISTVKKTDAGTNKKAAPVVNVWKLVDAAEPAAFERVSSDVRQAIQKARLDKK 354
           +A+RSGA + T+KK D G NKKAAP++N  KL +  EPAA +RVS DVRQ IQKARL+KK
Sbjct: 36  KAIRSGAPVQTLKKFDGGANKKAAPIMNTRKLDEGTEPAALDRVSVDVRQLIQKARLEKK 95

Query: 353 WSQAELAKRINEKPAVVQEYESGKAVPTQNVLQQMEKHLGVKLRGKIGK 207
            SQAELAK INE+P VVQEYE GKAVP Q VL +MEK LGVKLRGKI K
Sbjct: 96  MSQAELAKLINERPQVVQEYEBGKAVPNQAVLAKMEKVLGVKLRGKISK 144


>ref|XP_002514331.1| Multiprotein-bridging factor, putative [Ricinus communis]
           gi|223546787|gb|EEF48285.1| Multiprotein-bridging
           factor, putative [Ricinus communis]
          Length = 146

 Score =  146 bits (368), Expect = 2e-33
 Identities = 78/111 (70%), Positives = 90/111 (81%), Gaps = 2/111 (1%)
 Frame = -2

Query: 533 QALRSGAAISTVKKTDAGTNKKAA--PVVNVWKLVDAAEPAAFERVSSDVRQAIQKARLD 360
           QALRSGA + T+KK D G NKKAA  PVVN  KL +  EPAA +RV+ +VRQAIQKARL+
Sbjct: 36  QALRSGAPVQTIKKFDGGANKKAAAGPVVNAKKLDEGTEPAALDRVAPEVRQAIQKARLE 95

Query: 359 KKWSQAELAKRINEKPAVVQEYESGKAVPTQNVLQQMEKHLGVKLRGKIGK 207
           KK SQAELAK INE+P VVQEYE+GKAVP + +L +MEK LGVKLRGKIGK
Sbjct: 96  KKMSQAELAKLINEQPKVVQEYENGKAVPNKAILAKMEKVLGVKLRGKIGK 146


>ref|XP_002324409.1| predicted protein [Populus trichocarpa] gi|222865843|gb|EEF02974.1|
           predicted protein [Populus trichocarpa]
          Length = 145

 Score =  145 bits (365), Expect = 5e-33
 Identities = 76/109 (69%), Positives = 90/109 (82%), Gaps = 1/109 (0%)
 Frame = -2

Query: 530 ALRSGAAISTVKKTDAGTNKKA-APVVNVWKLVDAAEPAAFERVSSDVRQAIQKARLDKK 354
           ALRSGA + T+KK DAG+NKKA APVVN  KL +  EPAA +R+S++VRQAIQKARL+KK
Sbjct: 37  ALRSGAPVQTIKKFDAGSNKKATAPVVNARKLEEETEPAALDRISTEVRQAIQKARLEKK 96

Query: 353 WSQAELAKRINEKPAVVQEYESGKAVPTQNVLQQMEKHLGVKLRGKIGK 207
            SQ ELAK INE+P VVQEYE+GKAVP Q +L +ME+ LGVKLRGK GK
Sbjct: 97  MSQTELAKLINEQPKVVQEYENGKAVPNQAILAKMERVLGVKLRGKTGK 145


>gb|AAL32037.2|AF439278_1 ethylene-responsive transciptional coactivator-like protein [Retama
           raetam]
          Length = 145

 Score =  145 bits (365), Expect = 5e-33
 Identities = 77/110 (70%), Positives = 92/110 (83%), Gaps = 1/110 (0%)
 Frame = -2

Query: 533 QALRSGAAISTVKKTDAGTNKKAA-PVVNVWKLVDAAEPAAFERVSSDVRQAIQKARLDK 357
           QALR+GA + T+KK DAG+N+K A PVV   KL +AAEPAA ERV+ +VR AIQKARL+K
Sbjct: 36  QALRAGAEVQTIKKFDAGSNEKTAGPVVYARKLDEAAEPAALERVAGEVRHAIQKARLEK 95

Query: 356 KWSQAELAKRINEKPAVVQEYESGKAVPTQNVLQQMEKHLGVKLRGKIGK 207
           K SQAE+AK+INE+P VVQEYE+GKAVP Q VL +ME+ LGVKLRGKIGK
Sbjct: 96  KMSQAEVAKQINERPQVVQEYENGKAVPNQAVLAKMERVLGVKLRGKIGK 145


Top