BLASTX nr result

ID: Cimicifuga21_contig00027095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027095
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16333.1| unknown [Picea sitchensis]                             179   2e-43
ref|XP_002284423.1| PREDICTED: uncharacterized protein LOC100266...   179   3e-43
ref|XP_002303288.1| predicted protein [Populus trichocarpa] gi|2...   178   5e-43
ref|XP_002516035.1| conserved hypothetical protein [Ricinus comm...   177   1e-42
gb|AEI98632.1| hypothetical protein 111018.19 [Coffea canephora]      176   2e-42

>gb|ABR16333.1| unknown [Picea sitchensis]
          Length = 505

 Score =  179 bits (455), Expect = 2e-43
 Identities = 88/96 (91%), Positives = 94/96 (97%)
 Frame = -2

Query: 288 IFVPMLTLIIGFDAKSSTAISKCMIFGAAGSTVYYNLKLRHPTLEMPLIDYDLALLFQPM 109
           IFVPMLTLIIGFDAKSSTAISKCMI GAAGSTVYYNLKL+HPTL++P+IDYDLA+LFQPM
Sbjct: 115 IFVPMLTLIIGFDAKSSTAISKCMIMGAAGSTVYYNLKLKHPTLDLPIIDYDLAMLFQPM 174

Query: 108 LMLGISIGVTFNVIFADWMVTVLLIILFVGTSTKAF 1
           LMLGISIGV FNVIFADWMVTVLLIILF+GTSTKAF
Sbjct: 175 LMLGISIGVAFNVIFADWMVTVLLIILFLGTSTKAF 210


>ref|XP_002284423.1| PREDICTED: uncharacterized protein LOC100266912 [Vitis vinifera]
           gi|297743252|emb|CBI36119.3| unnamed protein product
           [Vitis vinifera]
          Length = 481

 Score =  179 bits (453), Expect = 3e-43
 Identities = 87/96 (90%), Positives = 93/96 (96%)
 Frame = -2

Query: 288 IFVPMLTLIIGFDAKSSTAISKCMIFGAAGSTVYYNLKLRHPTLEMPLIDYDLALLFQPM 109
           IFVPMLTL+IGFDAKSSTAISKCMI GAA STVYYNLKLRHPTL+MP+IDYDLALLFQPM
Sbjct: 105 IFVPMLTLVIGFDAKSSTAISKCMIMGAAASTVYYNLKLRHPTLDMPIIDYDLALLFQPM 164

Query: 108 LMLGISIGVTFNVIFADWMVTVLLIILFVGTSTKAF 1
           L+LGISIGV FNVIFADWMVTVLLI+LF+GTSTKAF
Sbjct: 165 LVLGISIGVAFNVIFADWMVTVLLIVLFIGTSTKAF 200


>ref|XP_002303288.1| predicted protein [Populus trichocarpa] gi|222840720|gb|EEE78267.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score =  178 bits (451), Expect = 5e-43
 Identities = 88/96 (91%), Positives = 93/96 (96%)
 Frame = -2

Query: 288 IFVPMLTLIIGFDAKSSTAISKCMIFGAAGSTVYYNLKLRHPTLEMPLIDYDLALLFQPM 109
           IFVPMLTLIIGFDAKSSTAISKCMI GAA STVYYNLKLRHPTL+MP+IDYDLALLFQPM
Sbjct: 52  IFVPMLTLIIGFDAKSSTAISKCMITGAAASTVYYNLKLRHPTLDMPVIDYDLALLFQPM 111

Query: 108 LMLGISIGVTFNVIFADWMVTVLLIILFVGTSTKAF 1
           L+LGISIGV FNVIFADWM+TVLLIILF+GTSTKAF
Sbjct: 112 LVLGISIGVAFNVIFADWMITVLLIILFIGTSTKAF 147


>ref|XP_002516035.1| conserved hypothetical protein [Ricinus communis]
           gi|223544940|gb|EEF46455.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 483

 Score =  177 bits (448), Expect = 1e-42
 Identities = 87/96 (90%), Positives = 93/96 (96%)
 Frame = -2

Query: 288 IFVPMLTLIIGFDAKSSTAISKCMIFGAAGSTVYYNLKLRHPTLEMPLIDYDLALLFQPM 109
           IFVPMLTLIIGFDAKSSTAISKCMI GAA STVYYNLKLRHPTL+MP+IDYDLALLFQP+
Sbjct: 107 IFVPMLTLIIGFDAKSSTAISKCMITGAAASTVYYNLKLRHPTLDMPIIDYDLALLFQPV 166

Query: 108 LMLGISIGVTFNVIFADWMVTVLLIILFVGTSTKAF 1
           L+LGISIGV FNVIFADWM+TVLLIILF+GTSTKAF
Sbjct: 167 LVLGISIGVAFNVIFADWMITVLLIILFIGTSTKAF 202


>gb|AEI98632.1| hypothetical protein 111018.19 [Coffea canephora]
          Length = 465

 Score =  176 bits (446), Expect = 2e-42
 Identities = 86/96 (89%), Positives = 93/96 (96%)
 Frame = -2

Query: 288 IFVPMLTLIIGFDAKSSTAISKCMIFGAAGSTVYYNLKLRHPTLEMPLIDYDLALLFQPM 109
           IFVPML+LIIGFD KSSTAISKCMI GAAGSTVYYNL+LRHPTL++PLIDYDLALLFQPM
Sbjct: 110 IFVPMLSLIIGFDPKSSTAISKCMIMGAAGSTVYYNLRLRHPTLDLPLIDYDLALLFQPM 169

Query: 108 LMLGISIGVTFNVIFADWMVTVLLIILFVGTSTKAF 1
           LMLGISIGV FNVIFADWMVTVLLI+LF+GTS+KAF
Sbjct: 170 LMLGISIGVAFNVIFADWMVTVLLILLFIGTSSKAF 205


Top