BLASTX nr result

ID: Cimicifuga21_contig00027082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027082
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521705.1| poly(A) polymerase, putative [Ricinus commun...   136   2e-30
ref|XP_002307206.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29
emb|CBI38416.3| unnamed protein product [Vitis vinifera]              132   3e-29
emb|CAN80033.1| hypothetical protein VITISV_007071 [Vitis vinifera]   132   3e-29
ref|XP_004146209.1| PREDICTED: uncharacterized protein LOC101212...   117   2e-24

>ref|XP_002521705.1| poly(A) polymerase, putative [Ricinus communis]
           gi|223539096|gb|EEF40692.1| poly(A) polymerase, putative
           [Ricinus communis]
          Length = 675

 Score =  136 bits (343), Expect = 2e-30
 Identities = 78/167 (46%), Positives = 104/167 (62%)
 Frame = -2

Query: 501 SRLQTLIFNSQRVNHTLVGDIEKSKFIEEVDSHSPSNSSTCNIHVDVDMSSWKAVDSRIH 322
           SRL+ L    QR NH+L+   +   +   + S S    ST      +D+S WK +++   
Sbjct: 13  SRLRNLT-TLQRFNHSLIE--QTPLYPRMISSDSKDQQSTV-----IDISKWKKINASAV 64

Query: 321 GIDRNXXXXXXXXXXXXLREEGKKAYLVGGCVRDLLLGRIPKDFDVITNAELTKITKYYH 142
           GI R+            L  +G +AYLVGGCVRDLLL RIPKDFDVIT A+L ++ K +H
Sbjct: 65  GIKRSMIPPSPWLVLKILHNKGFEAYLVGGCVRDLLLNRIPKDFDVITTAKLKQVKKQFH 124

Query: 141 RARIVGQRFPICQVFIKGSMVEVSSFETVAKDADEKETVFVSQGATG 1
           R  IVG+RFPIC+V +KGS+VEVSSFETVA+  + KE V +SQ  +G
Sbjct: 125 RCEIVGRRFPICRVHVKGSVVEVSSFETVAQHNEGKEEVLISQKPSG 171


>ref|XP_002307206.1| predicted protein [Populus trichocarpa] gi|222856655|gb|EEE94202.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score =  133 bits (334), Expect = 2e-29
 Identities = 68/117 (58%), Positives = 82/117 (70%)
 Frame = -2

Query: 363 VDMSSWKAVDSRIHGIDRNXXXXXXXXXXXXLREEGKKAYLVGGCVRDLLLGRIPKDFDV 184
           VD S W+ V++R HGI R+            LR  G +AYLVGGCVRDLLL R+PKDFDV
Sbjct: 1   VDRSKWRKVNARYHGITRSMIPDAPWTVLKLLRVGGFEAYLVGGCVRDLLLNRVPKDFDV 60

Query: 183 ITNAELTKITKYYHRARIVGQRFPICQVFIKGSMVEVSSFETVAKDADEKETVFVSQ 13
           IT A L +I K +HRA IVG+RFPIC V +KGS++EVSSFET A+   EKE V +SQ
Sbjct: 61  ITTANLQQIKKKFHRAHIVGRRFPICIVHVKGSVIEVSSFETSAQQCQEKEKVLLSQ 117


>emb|CBI38416.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score =  132 bits (333), Expect = 3e-29
 Identities = 68/119 (57%), Positives = 85/119 (71%)
 Frame = -2

Query: 357 MSSWKAVDSRIHGIDRNXXXXXXXXXXXXLREEGKKAYLVGGCVRDLLLGRIPKDFDVIT 178
           MS WK +DSR  GI R+            L+ EG +AYLVGGCVRDL+L + PKDFDVIT
Sbjct: 1   MSKWKKLDSRTFGITRSMISSPSWVVLKLLQREGFEAYLVGGCVRDLILNKTPKDFDVIT 60

Query: 177 NAELTKITKYYHRARIVGQRFPICQVFIKGSMVEVSSFETVAKDADEKETVFVSQGATG 1
            A+L +I K + RA+IVG+RFPIC+V +KGS++EVSSFETVAK  +EKE V  SQ  +G
Sbjct: 61  TAKLKQIKKRFRRAQIVGRRFPICRVHVKGSVIEVSSFETVAKHGEEKEKVSFSQMPSG 119


>emb|CAN80033.1| hypothetical protein VITISV_007071 [Vitis vinifera]
          Length = 693

 Score =  132 bits (333), Expect = 3e-29
 Identities = 68/119 (57%), Positives = 85/119 (71%)
 Frame = -2

Query: 357 MSSWKAVDSRIHGIDRNXXXXXXXXXXXXLREEGKKAYLVGGCVRDLLLGRIPKDFDVIT 178
           MS WK +DSR  GI R+            L+ EG +AYLVGGCVRDL+L + PKDFDVIT
Sbjct: 1   MSKWKKLDSRTFGITRSMISSPSWFVLKLLQREGFEAYLVGGCVRDLILNKTPKDFDVIT 60

Query: 177 NAELTKITKYYHRARIVGQRFPICQVFIKGSMVEVSSFETVAKDADEKETVFVSQGATG 1
            A+L +I K + RA+IVG+RFPIC+V +KGS++EVSSFETVAK  +EKE V  SQ  +G
Sbjct: 61  TAKLKQIKKRFRRAQIVGRRFPICRVHVKGSVIEVSSFETVAKHGEEKEKVSFSQMPSG 119


>ref|XP_004146209.1| PREDICTED: uncharacterized protein LOC101212579 [Cucumis sativus]
          Length = 810

 Score =  117 bits (292), Expect = 2e-24
 Identities = 60/116 (51%), Positives = 76/116 (65%)
 Frame = -2

Query: 360 DMSSWKAVDSRIHGIDRNXXXXXXXXXXXXLREEGKKAYLVGGCVRDLLLGRIPKDFDVI 181
           DM  W  ++ R  G+ R+            L  EG +AYLVGGCVRDLLL R+PKDFDVI
Sbjct: 76  DMPKWNKINGRAFGLTRSMIPSSSWKVLEVLHREGFEAYLVGGCVRDLLLRRVPKDFDVI 135

Query: 180 TNAELTKITKYYHRARIVGQRFPICQVFIKGSMVEVSSFETVAKDADEKETVFVSQ 13
           T A LT+I   + R+RIVG+RFPIC V I+GS+ EVSSF+T AK ++E +    SQ
Sbjct: 136 TTAGLTQIHNLFCRSRIVGRRFPICMVHIRGSITEVSSFDTAAKHSEENKITAHSQ 191


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