BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027065
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157439.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...    73   2e-11
ref|XP_004137447.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...    73   2e-11
ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, ...    71   8e-11
ref|XP_003528235.1| PREDICTED: cleavage stimulation factor subun...    70   1e-10
ref|NP_200902.1| transducin/WD40 domain-containing protein [Arab...    69   5e-10

>ref|XP_004157439.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
           1-like [Cucumis sativus]
          Length = 437

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/62 (61%), Positives = 44/62 (70%)
 Frame = -2

Query: 188 METSLEQNLQDMKLLRQVNGLIIAHLRDNNLSQXXXXXXXXXXTPLNVEAPPNKLLELVA 9
           ME S EQ LQD +L RQVN LI+AHLRD+NL+Q          TPLNV+ PP KL+ELVA
Sbjct: 1   MEGSFEQTLQDGQLYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDVPPKKLMELVA 60

Query: 8   KG 3
           KG
Sbjct: 61  KG 62


>ref|XP_004137447.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
           1-like [Cucumis sativus]
          Length = 435

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/62 (61%), Positives = 44/62 (70%)
 Frame = -2

Query: 188 METSLEQNLQDMKLLRQVNGLIIAHLRDNNLSQXXXXXXXXXXTPLNVEAPPNKLLELVA 9
           ME S EQ LQD +L RQVN LI+AHLRD+NL+Q          TPLNV+ PP KL+ELVA
Sbjct: 1   MEGSFEQTLQDGQLYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDVPPKKLMELVA 60

Query: 8   KG 3
           KG
Sbjct: 61  KG 62


>ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, putative [Ricinus
           communis] gi|223546234|gb|EEF47736.1| Cleavage
           stimulation factor 50 kDa subunit, putative [Ricinus
           communis]
          Length = 435

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 40/60 (66%), Positives = 46/60 (76%)
 Frame = -2

Query: 182 TSLEQNLQDMKLLRQVNGLIIAHLRDNNLSQXXXXXXXXXXTPLNVEAPPNKLLELVAKG 3
           +SLEQ LQD KL RQ+N LI+AHLRD++L+Q          TPLNVEAPPNKLLELVAKG
Sbjct: 4   SSLEQTLQDGKLHRQLNSLIVAHLRDSSLTQ---AIASATMTPLNVEAPPNKLLELVAKG 60


>ref|XP_003528235.1| PREDICTED: cleavage stimulation factor subunit 1-like [Glycine max]
          Length = 425

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/60 (60%), Positives = 44/60 (73%)
 Frame = -2

Query: 182 TSLEQNLQDMKLLRQVNGLIIAHLRDNNLSQXXXXXXXXXXTPLNVEAPPNKLLELVAKG 3
           +S EQ +QD KL R +N LI+AHLRDN+L+Q          TPLNVEAPPN+LL+LVAKG
Sbjct: 4   SSSEQTVQDGKLYRNLNSLIVAHLRDNSLTQAASAVASATMTPLNVEAPPNRLLDLVAKG 63


>ref|NP_200902.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|21591635|gb|AAM64165.1|AF515696_1 cleavage
           stimulation factor 50 [Arabidopsis thaliana]
           gi|21536993|gb|AAM61334.1| cleavage stimulation factor
           50K chain [Arabidopsis thaliana]
           gi|22531092|gb|AAM97050.1| cleavage stimulation factor
           50K chain [Arabidopsis thaliana]
           gi|23197952|gb|AAN15503.1| cleavage stimulation factor
           50K chain [Arabidopsis thaliana]
           gi|332010016|gb|AED97399.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 429

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/58 (60%), Positives = 41/58 (70%)
 Frame = -2

Query: 176 LEQNLQDMKLLRQVNGLIIAHLRDNNLSQXXXXXXXXXXTPLNVEAPPNKLLELVAKG 3
           LEQ LQD  + RQ+N LI+AHLR +NLSQ          TPLN+E PPN+LLELVAKG
Sbjct: 7   LEQALQDGNIFRQLNALIVAHLRHHNLSQVASAVASATMTPLNIEVPPNRLLELVAKG 64