BLASTX nr result

ID: Cimicifuga21_contig00027054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027054
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_177746.1| SAUR-like auxin-responsive protein [Arabidopsis...   118   8e-25
ref|XP_002887629.1| auxin-responsive family protein [Arabidopsis...   111   1e-22
ref|XP_002890390.1| auxin-responsive family protein [Arabidopsis...   108   9e-22
ref|NP_173471.2| SAUR-like auxin-responsive protein [Arabidopsis...   107   3e-21
ref|XP_002522664.1| calmodulin binding protein, putative [Ricinu...    92   6e-17

>ref|NP_177746.1| SAUR-like auxin-responsive protein [Arabidopsis thaliana]
           gi|6573709|gb|AAF17629.1|AC009978_5 T23E18.13
           [Arabidopsis thaliana] gi|332197688|gb|AEE35809.1|
           SAUR-like auxin-responsive protein [Arabidopsis
           thaliana]
          Length = 123

 Score =  118 bits (296), Expect = 8e-25
 Identities = 55/103 (53%), Positives = 83/103 (80%), Gaps = 3/103 (2%)
 Frame = -2

Query: 454 KLSEIIGSWRKRRRGYFVVYAKEGKRFVVPLYYLNHPIFRVLLEMAEEEFGSTVHGPLQV 275
           +LSE++  WR+R++G+F VY  EGKRFV+PL YLNHP+ +VLL+MAE+EFG+T+ GPL+V
Sbjct: 10  RLSELMEKWRRRKKGHFAVYTNEGKRFVLPLDYLNHPMLQVLLQMAEDEFGTTIDGPLKV 69

Query: 274 PCEEELMEYIVALLRKNPT---VEVEKALLSITTCRGASFSSM 155
           PC+  LM++I+ L+R++ +    +VEK+  S +TC+GAS SS+
Sbjct: 70  PCDGSLMDHIIMLVRRSMSHDYDDVEKSSTS-STCKGASISSL 111


>ref|XP_002887629.1| auxin-responsive family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333470|gb|EFH63888.1| auxin-responsive family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score =  111 bits (278), Expect = 1e-22
 Identities = 55/103 (53%), Positives = 81/103 (78%), Gaps = 3/103 (2%)
 Frame = -2

Query: 454 KLSEIIGSWRKRRRGYFVVYAKEGKRFVVPLYYLNHPIFRVLLEMAEEEFGSTVHGPLQV 275
           +LSE++  WR R+RGYF VY  EGKRFV+PL YLNH + +VLLEMAE+EFG+T+ GPL+V
Sbjct: 10  RLSELMEKWR-RKRGYFAVYTNEGKRFVLPLDYLNHRMLQVLLEMAEDEFGTTIDGPLKV 68

Query: 274 PCEEELMEYIVALLRKNPT---VEVEKALLSITTCRGASFSSM 155
           PC+  L+++I+ L+R++ +    +VEK+  S ++C+GAS SS+
Sbjct: 69  PCDGSLLDHIIMLVRRSKSHDYDDVEKSSTS-SSCKGASISSL 110


>ref|XP_002890390.1| auxin-responsive family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336232|gb|EFH66649.1| auxin-responsive family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 147

 Score =  108 bits (270), Expect = 9e-22
 Identities = 56/115 (48%), Positives = 79/115 (68%), Gaps = 16/115 (13%)
 Frame = -2

Query: 463 SSKKLSEIIGSWRKRRRGYFVVYAKEGKRFVVPLYYLNHPIFRVLLEMAEEEFGSTVHGP 284
           S  +L++++  WRK ++G+F VY +EG+RFV+PL YL HPIF+VLLEMAEEEFGST+ GP
Sbjct: 9   SRLRLTDLMEKWRKCKKGHFAVYTREGRRFVLPLDYLKHPIFQVLLEMAEEEFGSTICGP 68

Query: 283 LQVPCEEELMEYIVALLR----------------KNPTVEVEKALLSITTCRGAS 167
           LQVPC+  LM++I+ LLR                K  T+  + + +S T+C+GAS
Sbjct: 69  LQVPCDGGLMDHILMLLRNRNLSDHDDDGGDDGVKKKTMNQDVSPMS-TSCKGAS 122


>ref|NP_173471.2| SAUR-like auxin-responsive protein [Arabidopsis thaliana]
           gi|8778613|gb|AAF79621.1|AC027665_22 F5M15.19
           [Arabidopsis thaliana] gi|26450201|dbj|BAC42219.1|
           unknown protein [Arabidopsis thaliana]
           gi|28827448|gb|AAO50568.1| unknown protein [Arabidopsis
           thaliana] gi|332191855|gb|AEE29976.1| SAUR-like
           auxin-responsive protein [Arabidopsis thaliana]
          Length = 146

 Score =  107 bits (266), Expect = 3e-21
 Identities = 48/78 (61%), Positives = 65/78 (83%)
 Frame = -2

Query: 463 SSKKLSEIIGSWRKRRRGYFVVYAKEGKRFVVPLYYLNHPIFRVLLEMAEEEFGSTVHGP 284
           S  +L++++  WRK ++G+F VY +EG+RFV+PL YL HPIF+VLLEMAEEEFGST+ GP
Sbjct: 9   SRLRLTDLMEKWRKCKKGHFAVYTREGRRFVLPLDYLKHPIFQVLLEMAEEEFGSTICGP 68

Query: 283 LQVPCEEELMEYIVALLR 230
           LQVPC+  LM++I+ LLR
Sbjct: 69  LQVPCDGGLMDHILMLLR 86


>ref|XP_002522664.1| calmodulin binding protein, putative [Ricinus communis]
           gi|223538140|gb|EEF39751.1| calmodulin binding protein,
           putative [Ricinus communis]
          Length = 147

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 46/93 (49%), Positives = 66/93 (70%)
 Frame = -2

Query: 418 RRGYFVVYAKEGKRFVVPLYYLNHPIFRVLLEMAEEEFGSTVHGPLQVPCEEELMEYIVA 239
           ++G+FVVY+ + KRF++PL YLN  +FR L  MAEEEFGS  +GPL +PC+ ELMEY ++
Sbjct: 46  KKGHFVVYSADQKRFLLPLEYLNKEMFRELFNMAEEEFGSQSNGPLTLPCDAELMEYAIS 105

Query: 238 LLRKNPTVEVEKALLSITTCRGASFSSMPTNRV 140
           L+++  T EVE A L ++   G S+SS    +V
Sbjct: 106 LIKQQVTREVENAFL-MSISSGCSWSSCVQEQV 137


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