BLASTX nr result
ID: Cimicifuga21_contig00027009
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00027009
(689 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795... 77 1e-26
gb|ABI34329.1| Integrase core domain containing protein [Solanum... 73 2e-23
gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar] 69 2e-23
emb|CAN71748.1| hypothetical protein VITISV_019194 [Vitis vinifera] 69 2e-23
emb|CAN63534.1| hypothetical protein VITISV_001206 [Vitis vinifera] 69 2e-23
>ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795634 [Glycine max]
Length = 1815
Score = 76.6 bits (187), Expect(3) = 1e-26
Identities = 40/73 (54%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Frame = -1
Query: 392 YIHGDLEA-VYMD*SPGYVVQGHSDMVYRLRKAIYGLKQSPRACFDKFSYVA-IGCL*RS 219
++HGDLE +YM+ PG+V QG D+V +LR+++YGLKQSPRA F KFS+V + L RS
Sbjct: 1117 FLHGDLEEDIYMEQPPGFVAQGEYDLVCKLRRSLYGLKQSPRAWFGKFSHVVQMFGLKRS 1176
Query: 218 SIDHSVFVRRSSP 180
DHSVF +SP
Sbjct: 1177 EADHSVFYYHTSP 1189
Score = 50.4 bits (119), Expect(3) = 1e-26
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Frame = -2
Query: 667 WRLSMDEEMSALVHNGSWELV--PPAFWEKDC-W---SSMGLHNYVSARWFC*AFEVRLV 506
WR +M +EM AL +NG+WELV PP C W +G + V + RLV
Sbjct: 1016 WRQAMVDEMQALENNGTWELVPLPPGKTTVGCRWVYTVKVGPNGKVD------RLKARLV 1069
Query: 505 AKGYIQTYGVHYSETLS 455
AKGY Q YG+ Y +T S
Sbjct: 1070 AKGYTQVYGIDYGDTFS 1086
Score = 38.9 bits (89), Expect(3) = 1e-26
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = -3
Query: 105 EFLFSSTFHTKELGLLQYFRGIEVA*SKEGVYLSQ 1
E LFS F TK+LG L+YF GIEVA S +G+ +SQ
Sbjct: 1217 EHLFSH-FQTKDLGSLKYFLGIEVAQSGDGIVISQ 1250
>gb|ABI34329.1| Integrase core domain containing protein [Solanum demissum]
Length = 1775
Score = 72.8 bits (177), Expect(3) = 2e-23
Identities = 43/75 (57%), Positives = 53/75 (70%), Gaps = 4/75 (5%)
Frame = -1
Query: 392 YIHGDLEA-VYMD*SPGYVVQGHSD-MVYRLRKAIYGLKQSPRACFDKFSYV--AIGCL* 225
++HGDLE VYM+ PG+V QG S +V RLR+++YGLKQSPRA F KFS V G +
Sbjct: 987 FLHGDLEEEVYMEQPPGFVAQGESSSLVCRLRRSLYGLKQSPRAWFGKFSTVIQEFG-MT 1045
Query: 224 RSSIDHSVFVRRSSP 180
RS DHSVF R S+P
Sbjct: 1046 RSGADHSVFYRHSAP 1060
Score = 44.3 bits (103), Expect(3) = 2e-23
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = -2
Query: 667 WRLSMDEEMSALVHNGSWELVP-PAFWEKDCWSSMGLHNYVSARWFC*AFEVRLVAKGYI 491
WR +M +EMSAL +G+WELV PA +G V + RLVAKGY
Sbjct: 898 WRQAMVDEMSALHKSGTWELVSLPAV-------KIGPDGQVD------RLKARLVAKGYT 944
Query: 490 QTYGVHYSETLS 455
Q +G+ YS+T +
Sbjct: 945 QIFGLDYSDTFA 956
Score = 37.7 bits (86), Expect(3) = 2e-23
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = -3
Query: 84 FHTKELGLLQYFRGIEVA*SKEGVYLSQ 1
F TK+LG L+YF GIEVA S+ G+ +SQ
Sbjct: 1094 FQTKDLGRLKYFLGIEVAQSRSGIVISQ 1121
>gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]
Length = 1382
Score = 68.6 bits (166), Expect(3) = 2e-23
Identities = 39/73 (53%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Frame = -1
Query: 392 YIHGDLEA-VYMD*SPGYVVQGHSDMVYRLRKAIYGLKQSPRACFDKFS--YVAIGCL*R 222
++HGDLE VY++ PG+V QG V RL+KA+YGLKQSPRA F KFS A G + +
Sbjct: 985 FLHGDLEEEVYLEQPPGFVAQGEYGKVCRLKKALYGLKQSPRAWFGKFSKEIQAFG-MNK 1043
Query: 221 SSIDHSVFVRRSS 183
S DHSVF ++S+
Sbjct: 1044 SEKDHSVFYKKSA 1056
Score = 44.3 bits (103), Expect(3) = 2e-23
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = -3
Query: 108 LEFLFSSTFHTKELGLLQYFRGIEVA*SKEGVYLSQ 1
L+ S FHTK+LG L+YF GIEV+ SK+G++LSQ
Sbjct: 1082 LKTFMHSKFHTKDLGELKYFLGIEVSRSKKGMFLSQ 1117
Score = 42.0 bits (97), Expect(3) = 2e-23
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -3
Query: 609 LFPLPSGKKTVGHRWVYTIMYQPDGSVKHLKFD*WLRDIFK-HMVFIILRLSRTASQNSV 433
L LP GKK VG +WV+ + PDGSV LK R + + V S A NSV
Sbjct: 903 LVDLPQGKKVVGCKWVFAVKVNPDGSVARLKARLVARGYAQTYGVDYSDTFSPVAKLNSV 962
Query: 432 RVILSMA 412
R+ +S+A
Sbjct: 963 RLFISIA 969
>emb|CAN71748.1| hypothetical protein VITISV_019194 [Vitis vinifera]
Length = 1306
Score = 68.6 bits (166), Expect(3) = 2e-23
Identities = 39/73 (53%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Frame = -1
Query: 392 YIHGDLEA-VYMD*SPGYVVQGHSDMVYRLRKAIYGLKQSPRACFDKFS--YVAIGCL*R 222
++HGDLE VY++ PG+V QG V RL+KA+YGLKQSPRA F KFS A G + +
Sbjct: 945 FLHGDLEEEVYLEQPPGFVAQGEYGKVCRLKKALYGLKQSPRAWFGKFSKEIQAFG-MNK 1003
Query: 221 SSIDHSVFVRRSS 183
S DHSVF ++S+
Sbjct: 1004 SEKDHSVFYKKSA 1016
Score = 44.3 bits (103), Expect(3) = 2e-23
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = -3
Query: 108 LEFLFSSTFHTKELGLLQYFRGIEVA*SKEGVYLSQ 1
L+ S FHTK+LG L+YF GIEV+ SK+G++LSQ
Sbjct: 1042 LKTFMHSKFHTKDLGELKYFLGIEVSRSKKGMFLSQ 1077
Score = 42.0 bits (97), Expect(3) = 2e-23
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -3
Query: 609 LFPLPSGKKTVGHRWVYTIMYQPDGSVKHLKFD*WLRDIFK-HMVFIILRLSRTASQNSV 433
L LP GKK VG +WV+ + PDGSV LK R + + V S A NSV
Sbjct: 863 LVDLPQGKKVVGCKWVFAVKVNPDGSVARLKARLVARGYAQTYGVDYSDTFSPVAKLNSV 922
Query: 432 RVILSMA 412
R+ +S+A
Sbjct: 923 RLFISIA 929
>emb|CAN63534.1| hypothetical protein VITISV_001206 [Vitis vinifera]
Length = 1189
Score = 68.6 bits (166), Expect(3) = 2e-23
Identities = 39/73 (53%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Frame = -1
Query: 392 YIHGDLEA-VYMD*SPGYVVQGHSDMVYRLRKAIYGLKQSPRACFDKFS--YVAIGCL*R 222
++HGDLE VY++ PG+V QG V RL+KA+YGLKQSPRA F KFS A G + +
Sbjct: 840 FLHGDLEEEVYLEQPPGFVAQGEYGKVCRLKKALYGLKQSPRAWFGKFSKEIQAFG-MNK 898
Query: 221 SSIDHSVFVRRSS 183
S DHSVF ++S+
Sbjct: 899 SEKDHSVFYKKSA 911
Score = 44.3 bits (103), Expect(3) = 2e-23
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = -3
Query: 108 LEFLFSSTFHTKELGLLQYFRGIEVA*SKEGVYLSQ 1
L+ S FHTK+LG L+YF GIEV+ SK+G++LSQ
Sbjct: 937 LKTFMHSKFHTKDLGELKYFLGIEVSRSKKGMFLSQ 972
Score = 42.0 bits (97), Expect(3) = 2e-23
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -3
Query: 609 LFPLPSGKKTVGHRWVYTIMYQPDGSVKHLKFD*WLRDIFK-HMVFIILRLSRTASQNSV 433
L LP GKK VG +WV+ + PDGSV LK R + + V S A NSV
Sbjct: 758 LVDLPQGKKVVGCKWVFAVKVNPDGSVARLKARLVARGYAQTYGVDYSDTFSPVAKLNSV 817
Query: 432 RVILSMA 412
R+ +S+A
Sbjct: 818 RLFISIA 824