BLASTX nr result

ID: Cimicifuga21_contig00026973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026973
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containi...    77   3e-12
gb|AFG65217.1| Pinus taeda anonymous locus 0_10195_01 genomic se...    68   1e-09
gb|AEW07735.1| Pinus taeda anonymous locus 0_10195_01 genomic se...    68   1e-09
ref|XP_002452263.1| hypothetical protein SORBIDRAFT_04g022670 [S...    68   1e-09
gb|AFG65224.1| Pinus taeda anonymous locus 0_10195_01 genomic se...    67   2e-09

>ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 580

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 36/61 (59%), Positives = 46/61 (75%)
 Frame = -2

Query: 610 RKIRRLMNERGLRKAAAYSWIEVRNARHGFVAEDQSHAKKEEIYIMIAKLTEQMGEGGYQ 431
           R++RRLM ERGLRK AA SWIEVRN RH FVA+++SH +  E+Y +I  L +QM + GY 
Sbjct: 507 RQVRRLMMERGLRKEAACSWIEVRNTRHQFVAKERSHCQINEVYEVIHNLVDQMYDSGYL 566

Query: 430 P 428
           P
Sbjct: 567 P 567


>gb|AFG65217.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
          Length = 136

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 29/60 (48%), Positives = 41/60 (68%)
 Frame = -2

Query: 607 KIRRLMNERGLRKAAAYSWIEVRNARHGFVAEDQSHAKKEEIYIMIAKLTEQMGEGGYQP 428
           ++R++M  RG++K   YSWIEV+N  H F+  D+SH + EEIY  +  LTEQ+ E GY P
Sbjct: 1   RMRQMMKSRGIQKKPGYSWIEVKNKVHSFMVNDRSHPQTEEIYTTLESLTEQIKEVGYMP 60


>gb|AEW07735.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
           gi|383164845|gb|AFG65218.1| Pinus taeda anonymous locus
           0_10195_01 genomic sequence gi|383164849|gb|AFG65220.1|
           Pinus taeda anonymous locus 0_10195_01 genomic sequence
           gi|383164851|gb|AFG65221.1| Pinus taeda anonymous locus
           0_10195_01 genomic sequence gi|383164853|gb|AFG65222.1|
           Pinus taeda anonymous locus 0_10195_01 genomic sequence
           gi|383164855|gb|AFG65223.1| Pinus taeda anonymous locus
           0_10195_01 genomic sequence gi|383164859|gb|AFG65225.1|
           Pinus taeda anonymous locus 0_10195_01 genomic sequence
           gi|383164861|gb|AFG65226.1| Pinus taeda anonymous locus
           0_10195_01 genomic sequence gi|383164863|gb|AFG65227.1|
           Pinus taeda anonymous locus 0_10195_01 genomic sequence
           gi|383164865|gb|AFG65228.1| Pinus taeda anonymous locus
           0_10195_01 genomic sequence gi|383164867|gb|AFG65229.1|
           Pinus taeda anonymous locus 0_10195_01 genomic sequence
          Length = 136

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 29/60 (48%), Positives = 41/60 (68%)
 Frame = -2

Query: 607 KIRRLMNERGLRKAAAYSWIEVRNARHGFVAEDQSHAKKEEIYIMIAKLTEQMGEGGYQP 428
           ++R++M  RG++K   YSWIEV+N  H F+  D+SH + EEIY  +  LTEQ+ E GY P
Sbjct: 1   RMRQMMKSRGIQKKPGYSWIEVKNRVHSFMVNDRSHPQTEEIYTTLESLTEQIKEVGYMP 60


>ref|XP_002452263.1| hypothetical protein SORBIDRAFT_04g022670 [Sorghum bicolor]
           gi|241932094|gb|EES05239.1| hypothetical protein
           SORBIDRAFT_04g022670 [Sorghum bicolor]
          Length = 603

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 30/54 (55%), Positives = 41/54 (75%)
 Frame = -2

Query: 610 RKIRRLMNERGLRKAAAYSWIEVRNARHGFVAEDQSHAKKEEIYIMIAKLTEQM 449
           R++R LM E+GL+K  AYSWIEVR+ +H FVA+D SH + +EIY M+ KL + M
Sbjct: 536 RRVRGLMKEKGLKKDQAYSWIEVRSLKHVFVADDMSHCEADEIYEMLGKLLDHM 589


>gb|AFG65224.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
          Length = 136

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 29/60 (48%), Positives = 41/60 (68%)
 Frame = -2

Query: 607 KIRRLMNERGLRKAAAYSWIEVRNARHGFVAEDQSHAKKEEIYIMIAKLTEQMGEGGYQP 428
           ++R++M  RG++K   YSWIEV+N  H F+  D+SH + EEIY  +  LTEQ+ E GY P
Sbjct: 1   RMRQMMKSRGIQKKPGYSWIEVKNRVHSFMVNDRSHPQTEEIYKTLESLTEQIKEVGYMP 60


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