BLASTX nr result

ID: Cimicifuga21_contig00026972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026972
         (830 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39105.3| unnamed protein product [Vitis vinifera]              221   1e-55
ref|XP_002322764.1| white-brown-complex ABC transporter family [...   217   2e-54
ref|XP_003519092.1| PREDICTED: ABC transporter G family member 2...   216   5e-54
ref|XP_003535833.1| PREDICTED: ABC transporter G family member 2...   214   1e-53
ref|XP_002309268.1| white-brown-complex ABC transporter family [...   214   2e-53

>emb|CBI39105.3| unnamed protein product [Vitis vinifera]
          Length = 738

 Score =  221 bits (564), Expect = 1e-55
 Identities = 124/216 (57%), Positives = 145/216 (67%), Gaps = 7/216 (3%)
 Frame = -2

Query: 628 SPGR------KTHIRKSRSAQLKLDLEEVNXXXXXXXXXXXXXXXXXXXXXFTVPPEDIV 467
           SPGR       THIRKSRSAQ+KLDL+EV+                     FTVPP++I 
Sbjct: 50  SPGRAGGNSKNTHIRKSRSAQIKLDLDEVSSGAALSRASSASLGFSFSFTGFTVPPDEIS 109

Query: 466 DIQGFSDDDPPENHEARTRK-RVPSEPTLPIFLKFTDVKYKVVLKSVRATVEKDILHGIT 290
           D + FSDDD P++ EA  RK R+ +EPTLPI+LKF DV YKV+LK +R  VEK+IL+GIT
Sbjct: 110 DFKPFSDDDTPDDLEAGMRKQRIQAEPTLPIYLKFKDVTYKVILKGMRTNVEKEILNGIT 169

Query: 289 GSASPGEVLALMXXXXXXXXXXXXXXXXXXXXXXXXXSITYNDHPYSKSLKRRIGFVTQD 110
           GS +PGEVLALM                         S+TYND PYSKSLK +IGFVTQD
Sbjct: 170 GSVNPGEVLALMGPSGSGKTTLLNLLGGRLNQPTAGGSVTYNDQPYSKSLKSKIGFVTQD 229

Query: 109 DVLFPHLTVRETLTYAALLRLPKTLTKQQKDERALD 2
           DVLFPHLTVRETLTYAA LRLPKTLTKQQK++RA+D
Sbjct: 230 DVLFPHLTVRETLTYAARLRLPKTLTKQQKEKRAVD 265


>ref|XP_002322764.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222867394|gb|EEF04525.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 744

 Score =  217 bits (553), Expect = 2e-54
 Identities = 132/273 (48%), Positives = 160/273 (58%), Gaps = 15/273 (5%)
 Frame = -2

Query: 775 MESPSAGLARTKSDQLELAIR---KSPSRTXXXXXXXXXXXXXXXXXXXR----LTSPGR 617
           ME  +  LART+S+QL   +    KSPS                     +      SPGR
Sbjct: 1   MEKENTSLARTRSEQLVETVAAAFKSPSNNEAIGVSDGSSGGTLSRKSSKRLMMAASPGR 60

Query: 616 KT-------HIRKSRSAQLKLDLEEVNXXXXXXXXXXXXXXXXXXXXXFTVPPEDIVDIQ 458
            T       HIRKSRSAQ+K DL++V+                     F +PP++I D +
Sbjct: 61  STSGGNKNTHIRKSRSAQMKFDLDDVSSGAALSRASSASLGFSFSFTGFNMPPDEIADSK 120

Query: 457 GFSDDDPPENHEARTRK-RVPSEPTLPIFLKFTDVKYKVVLKSVRATVEKDILHGITGSA 281
            FSDDD PE+ EA TRK +  +EPTLPI+LKFTDV YKV++K + +T EKDIL+GI+GS 
Sbjct: 121 PFSDDDIPEDLEAGTRKPKFQTEPTLPIYLKFTDVTYKVIIKGMTSTEEKDILYGISGSV 180

Query: 280 SPGEVLALMXXXXXXXXXXXXXXXXXXXXXXXXXSITYNDHPYSKSLKRRIGFVTQDDVL 101
            PGEVLALM                         S+TYND PYSK LK RIGFVTQDDVL
Sbjct: 181 DPGEVLALMGPSGSGKTTLLNLIGGRLNQTTVGGSLTYNDQPYSKFLKSRIGFVTQDDVL 240

Query: 100 FPHLTVRETLTYAALLRLPKTLTKQQKDERALD 2
           FPHLTV+ETLTYAALLRLPKTLTK+QK +RA+D
Sbjct: 241 FPHLTVKETLTYAALLRLPKTLTKEQKQKRAID 273


>ref|XP_003519092.1| PREDICTED: ABC transporter G family member 22-like [Glycine max]
          Length = 743

 Score =  216 bits (550), Expect = 5e-54
 Identities = 137/270 (50%), Positives = 161/270 (59%), Gaps = 12/270 (4%)
 Frame = -2

Query: 775 MESPSAGLARTKSDQLE---LAIRKSP-SRTXXXXXXXXXXXXXXXXXXXRLT--SPGR- 617
           ME  +  L RTKSDQL    +A  KSP S                     RLT  SPGR 
Sbjct: 1   MEKANTSLVRTKSDQLVESMVAALKSPASSDHSANGVVEGGGTISRKSSRRLTGASPGRG 60

Query: 616 --KTHIRKSRSAQL---KLDLEEVNXXXXXXXXXXXXXXXXXXXXXFTVPPEDIVDIQGF 452
              THIRKSRSAQ+   KL+L++V+                     FT+PPE+I D + F
Sbjct: 61  GKNTHIRKSRSAQISQMKLELDDVSSGAALSRASSASLGLSFSFTGFTMPPEEIADSKPF 120

Query: 451 SDDDPPENHEARTRKRVPSEPTLPIFLKFTDVKYKVVLKSVRATVEKDILHGITGSASPG 272
           SDDD PE+ E+  R +  +EPTLPI+LKFTDV YK+V+K +  T EKDIL+GITGS +PG
Sbjct: 121 SDDDIPEDIESGPRTKFQTEPTLPIYLKFTDVTYKIVIKGMTTTEEKDILNGITGSVNPG 180

Query: 271 EVLALMXXXXXXXXXXXXXXXXXXXXXXXXXSITYNDHPYSKSLKRRIGFVTQDDVLFPH 92
           EVLALM                         SITYND PYSK LK RIGFVTQDDVLFPH
Sbjct: 181 EVLALMGPSGSGKTTLLNLLGGRLSHPISGGSITYNDQPYSKFLKSRIGFVTQDDVLFPH 240

Query: 91  LTVRETLTYAALLRLPKTLTKQQKDERALD 2
           LTV+ETLTYAA LRLPKT TK+QK++RALD
Sbjct: 241 LTVKETLTYAARLRLPKTYTKEQKEKRALD 270


>ref|XP_003535833.1| PREDICTED: ABC transporter G family member 22-like [Glycine max]
          Length = 738

 Score =  214 bits (546), Expect = 1e-53
 Identities = 128/265 (48%), Positives = 153/265 (57%), Gaps = 7/265 (2%)
 Frame = -2

Query: 775 MESPSAGLARTKSDQL----ELAIRKSPSRTXXXXXXXXXXXXXXXXXXXRLTSPGRKTH 608
           ME  +  L RTKSDQL       ++  PS                          G+ TH
Sbjct: 1   MEKANTSLVRTKSDQLLESMVAGLKSPPSSDHSANGVVDSRKSSRWLTGASPGRGGKNTH 60

Query: 607 IRKSRSAQL---KLDLEEVNXXXXXXXXXXXXXXXXXXXXXFTVPPEDIVDIQGFSDDDP 437
           IRKSRSAQ+   KL+L++V+                     FT+PPE+I D + FSDDD 
Sbjct: 61  IRKSRSAQISQMKLELDDVSSGAALSRASSASLGLSFSFTGFTMPPEEIADSKPFSDDDI 120

Query: 436 PENHEARTRKRVPSEPTLPIFLKFTDVKYKVVLKSVRATVEKDILHGITGSASPGEVLAL 257
           PE+ EA  R +  +EPTLPI+LKFTDV YK+V+K +  T EKDIL+GITGS +PGEVLAL
Sbjct: 121 PEDIEAGPRTKFQTEPTLPIYLKFTDVTYKIVIKGMTTTEEKDILNGITGSVNPGEVLAL 180

Query: 256 MXXXXXXXXXXXXXXXXXXXXXXXXXSITYNDHPYSKSLKRRIGFVTQDDVLFPHLTVRE 77
           M                         SITYND PYSK LK RIGFVTQDDVLFPHLTV+E
Sbjct: 181 MGPSGSGKTTLLNLLGGRLSHPISGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKE 240

Query: 76  TLTYAALLRLPKTLTKQQKDERALD 2
           TLTYAA LRLPK  TK+QK++RALD
Sbjct: 241 TLTYAARLRLPKAYTKEQKEKRALD 265


>ref|XP_002309268.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222855244|gb|EEE92791.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 743

 Score =  214 bits (544), Expect = 2e-53
 Identities = 131/271 (48%), Positives = 156/271 (57%), Gaps = 13/271 (4%)
 Frame = -2

Query: 775 MESPSAGLARTKSDQLELAIR---KSPSRTXXXXXXXXXXXXXXXXXXXRLT--SPGR-- 617
           ME  +  LARTKS+QL   +    KSP                        T  SPGR  
Sbjct: 1   MERANTSLARTKSEQLAETVEAAFKSPMNNDGVSEGGSGGTLSGKSSKRLTTAASPGRTT 60

Query: 616 -----KTHIRKSRSAQLKLDLEEVNXXXXXXXXXXXXXXXXXXXXXFTVPPEDIVDIQGF 452
                 THIRKSRSAQ+K +L++VN                     F +PP++I D   F
Sbjct: 61  SGGNKNTHIRKSRSAQMKFELDDVNSGAALSRASSASLGFSFSFTGFNMPPDEIADSMPF 120

Query: 451 SDDDPPENHEARTRK-RVPSEPTLPIFLKFTDVKYKVVLKSVRATVEKDILHGITGSASP 275
           SDDD PE+ EA  RK +  +EP+LPI+LKF DV YKV++K + +T EKDIL+GI+GS  P
Sbjct: 121 SDDDIPEDLEAGMRKQKFQTEPSLPIYLKFRDVTYKVIIKGMTSTEEKDILNGISGSVDP 180

Query: 274 GEVLALMXXXXXXXXXXXXXXXXXXXXXXXXXSITYNDHPYSKSLKRRIGFVTQDDVLFP 95
           GEVLALM                         SITYND PYSK LK RIGFVTQDD+LFP
Sbjct: 181 GEVLALMGPSGSGKTTLLNLLGGRLNQPTVGGSITYNDGPYSKFLKSRIGFVTQDDILFP 240

Query: 94  HLTVRETLTYAALLRLPKTLTKQQKDERALD 2
           HLTV+ETLTYAALLRLPKTLTKQQK +RA+D
Sbjct: 241 HLTVKETLTYAALLRLPKTLTKQQKQKRAMD 271


Top