BLASTX nr result

ID: Cimicifuga21_contig00026901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026901
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containi...   253   1e-65
emb|CBI28334.3| unnamed protein product [Vitis vinifera]              253   1e-65
emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]   216   2e-54
ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containi...   176   1e-42
ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containi...   173   1e-41

>ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 616

 Score =  253 bits (646), Expect = 1e-65
 Identities = 116/167 (69%), Positives = 149/167 (89%)
 Frame = -2

Query: 503 MGEHAALRAIEMAPNDSSCYVLLSNVYAKAGRWDDVAKVRSMMKERKVRKVPGCSSIVIS 324
           +G+ AALRAIE+AP+DSS YVLLSN+YAKAGRWDDVAK+R MM++R V+K+ GCSS++++
Sbjct: 430 IGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVN 489

Query: 323 GKIHEFLAGKDMDSTYRGMVLQKLEEMVYRSKLVGYTPDLTQVLLDVEEEGKENLLSLHS 144
           GK+HEFL GK++DS+Y G VL K+ E+V R KL GY PDLTQVLLD+E+EGKE+LL+LHS
Sbjct: 490 GKVHEFLLGKELDSSYSGQVLAKIAEVVSRLKLQGYEPDLTQVLLDIEDEGKESLLNLHS 549

Query: 143 EKMALAYGLINLNEGAPIHIVKNLRVCCDCHTFIKLVSKVYNHPVVV 3
           EKMA+A+GLI++N+ APIHIVKNLRVCCDCH F+KLVSKVYN  +++
Sbjct: 550 EKMAIAFGLIHINKSAPIHIVKNLRVCCDCHCFMKLVSKVYNRQIIM 596


>emb|CBI28334.3| unnamed protein product [Vitis vinifera]
          Length = 604

 Score =  253 bits (646), Expect = 1e-65
 Identities = 116/167 (69%), Positives = 149/167 (89%)
 Frame = -2

Query: 503 MGEHAALRAIEMAPNDSSCYVLLSNVYAKAGRWDDVAKVRSMMKERKVRKVPGCSSIVIS 324
           +G+ AALRAIE+AP+DSS YVLLSN+YAKAGRWDDVAK+R MM++R V+K+ GCSS++++
Sbjct: 418 IGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVN 477

Query: 323 GKIHEFLAGKDMDSTYRGMVLQKLEEMVYRSKLVGYTPDLTQVLLDVEEEGKENLLSLHS 144
           GK+HEFL GK++DS+Y G VL K+ E+V R KL GY PDLTQVLLD+E+EGKE+LL+LHS
Sbjct: 478 GKVHEFLLGKELDSSYSGQVLAKIAEVVSRLKLQGYEPDLTQVLLDIEDEGKESLLNLHS 537

Query: 143 EKMALAYGLINLNEGAPIHIVKNLRVCCDCHTFIKLVSKVYNHPVVV 3
           EKMA+A+GLI++N+ APIHIVKNLRVCCDCH F+KLVSKVYN  +++
Sbjct: 538 EKMAIAFGLIHINKSAPIHIVKNLRVCCDCHCFMKLVSKVYNRQIIM 584


>emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
          Length = 1033

 Score =  216 bits (549), Expect = 2e-54
 Identities = 101/146 (69%), Positives = 129/146 (88%)
 Frame = -2

Query: 503 MGEHAALRAIEMAPNDSSCYVLLSNVYAKAGRWDDVAKVRSMMKERKVRKVPGCSSIVIS 324
           +G+ AALRAIE+AP+DSS YVLLSN+YAKAGRWDDVAK+R MM++R V+K+ GCSS+++ 
Sbjct: 461 IGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVB 520

Query: 323 GKIHEFLAGKDMDSTYRGMVLQKLEEMVYRSKLVGYTPDLTQVLLDVEEEGKENLLSLHS 144
           GK+HEFL GK++DS+Y G VL K+ E+V R KL GY PDLTQVLLD+E+EGKE+LL+LHS
Sbjct: 521 GKVHEFLXGKELDSSYSGQVLAKIAEVVSRLKLQGYEPDLTQVLLDIEDEGKESLLNLHS 580

Query: 143 EKMALAYGLINLNEGAPIHIVKNLRV 66
           EKMA A+GLI++N+ APIHIVKNLR+
Sbjct: 581 EKMAXAFGLIHINKSAPIHIVKNLRI 606


>ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690-like
            [Glycine max]
          Length = 836

 Score =  176 bits (447), Expect = 1e-42
 Identities = 89/169 (52%), Positives = 120/169 (71%), Gaps = 2/169 (1%)
 Frame = -2

Query: 503  MGEHAALRAIEMAPNDSSCYVLLSNVYAKAGRWDDVAKVRSMMKERKVRKVPGCSSIVIS 324
            +  +AA +  ++AP     +VLLSN+YA AG+W DVA+VR  MKE+ V+KVPG SSI + 
Sbjct: 651  LAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQ 710

Query: 323  GKIHEFLAGKDM--DSTYRGMVLQKLEEMVYRSKLVGYTPDLTQVLLDVEEEGKENLLSL 150
            G IHEF +G +   ++T+ G++L   EE+  R    GY PD T VLLDV+E+ KE+LLS 
Sbjct: 711  GLIHEFTSGDESHAENTHIGLML---EEINCRLSEAGYVPDTTNVLLDVDEQEKEHLLSR 767

Query: 149  HSEKMALAYGLINLNEGAPIHIVKNLRVCCDCHTFIKLVSKVYNHPVVV 3
            HSEK+A+AYGLI   +G PI +VKNLR+C DCH+F KLVSK+YN  + V
Sbjct: 768  HSEKLAMAYGLITTGQGIPIRVVKNLRMCSDCHSFAKLVSKLYNREITV 816


>ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 640

 Score =  173 bits (439), Expect = 1e-41
 Identities = 87/167 (52%), Positives = 109/167 (65%)
 Frame = -2

Query: 503 MGEHAALRAIEMAPNDSSCYVLLSNVYAKAGRWDDVAKVRSMMKERKVRKVPGCSSIVIS 324
           +GE    R +E+ PN    YVLLSN+YA  GRWD VA++R MM+ER+V K PGCS I + 
Sbjct: 455 LGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLG 514

Query: 323 GKIHEFLAGKDMDSTYRGMVLQKLEEMVYRSKLVGYTPDLTQVLLDVEEEGKENLLSLHS 144
             IHEF+AG D       M+  KL EM    K  GY PD  QVLLD++EE KE  L  HS
Sbjct: 515 DTIHEFVAG-DSSHPQLEMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKETALCHHS 573

Query: 143 EKMALAYGLINLNEGAPIHIVKNLRVCCDCHTFIKLVSKVYNHPVVV 3
           EK+A+A+GLI  + G  I I KNLRVC DCH+  KL+SK+YN  ++V
Sbjct: 574 EKLAIAFGLIKTDPGTTIRITKNLRVCADCHSATKLISKIYNREIIV 620


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