BLASTX nr result

ID: Cimicifuga21_contig00026876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026876
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM63520.1| DnaJ protein, putative [Arabidopsis thaliana]          108   3e-22
ref|NP_565034.1| chaperone DnaJ-domain containing protein [Arabi...   106   2e-21
ref|XP_001768152.1| predicted protein [Physcomitrella patens sub...    78   8e-13
ref|XP_001769114.1| predicted protein [Physcomitrella patens sub...    76   2e-12
emb|CBI25192.3| unnamed protein product [Vitis vinifera]               75   7e-12

>gb|AAM63520.1| DnaJ protein, putative [Arabidopsis thaliana]
          Length = 126

 Score =  108 bits (271), Expect = 3e-22
 Identities = 67/121 (55%), Positives = 77/121 (63%), Gaps = 3/121 (2%)
 Frame = +3

Query: 30  HKGGCLWTSSPANKKFDRCARFPTRSLPLSDD---FAVLGLTPFASKTDVKHAYKRLALK 200
           H G  + T S       R  RFPTR   LS D   + VLGLTP AS+T+VK A+KRLALK
Sbjct: 13  HPGSTIQTDSR------RLIRFPTRCC-LSPDLSHYTVLGLTPLASQTEVKRAFKRLALK 65

Query: 201 YHPDVIRGDHVYDKPEIFKEIKSAYENLMERFDMEELQTTDGYDDGHDEWEEWMGFEGGI 380
           YHPDV +G    DK   FKEIKSAYE LM++F+ EE +         DEWEEWMGFEGGI
Sbjct: 66  YHPDVHKGQ---DKD--FKEIKSAYECLMQKFEKEEEEMEITEMGEIDEWEEWMGFEGGI 120

Query: 381 P 383
           P
Sbjct: 121 P 121


>ref|NP_565034.1| chaperone DnaJ-domain containing protein [Arabidopsis thaliana]
           gi|332197149|gb|AEE35270.1| chaperone DnaJ-domain
           containing protein [Arabidopsis thaliana]
          Length = 126

 Score =  106 bits (264), Expect = 2e-21
 Identities = 66/121 (54%), Positives = 76/121 (62%), Gaps = 3/121 (2%)
 Frame = +3

Query: 30  HKGGCLWTSSPANKKFDRCARFPTRSLPLSDD---FAVLGLTPFASKTDVKHAYKRLALK 200
           H G  + T S       R  +FPTR   LS D   + VLGLTP AS+T+VK A+KRLALK
Sbjct: 13  HPGSTIQTDSR------RLIQFPTRCC-LSPDLSHYTVLGLTPLASQTEVKRAFKRLALK 65

Query: 201 YHPDVIRGDHVYDKPEIFKEIKSAYENLMERFDMEELQTTDGYDDGHDEWEEWMGFEGGI 380
           YHPDV +G    DK   FKEIKSAYE LM++F  EE +         DEWEEWMGFEGGI
Sbjct: 66  YHPDVHKGQ---DKD--FKEIKSAYECLMQKFKKEEEEMEITEMGEIDEWEEWMGFEGGI 120

Query: 381 P 383
           P
Sbjct: 121 P 121


>ref|XP_001768152.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162680590|gb|EDQ67025.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 183

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 9/103 (8%)
 Frame = +3

Query: 117 SDDFAVLGLTPFASKTDVKHAYKRLALKYHPDVIRGDHVYDKPEIFKEIKSAYENLMERF 296
           S+ FA LGL+  AS+ ++K AY++LAL+YHPDV +G+H      +FK++  AY   +E  
Sbjct: 76  SEHFATLGLSAAASRQEIKQAYRKLALQYHPDVCKGEHC---ALMFKQVNDAYYVALEAE 132

Query: 297 D--MEELQTTD-------GYDDGHDEWEEWMGFEGGIPVTYNT 398
           +  + ++ T D         DD  DEWEEWMG+EG     Y++
Sbjct: 133 EQVVNDIGTDDCLDGFMGAEDDSWDEWEEWMGWEGAGAADYSS 175


>ref|XP_001769114.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162679643|gb|EDQ66088.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 118

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 11/96 (11%)
 Frame = +3

Query: 120 DDFAVLGLTPFASKTDVKHAYKRLALKYHPDVIRGDHVYDKPEIFKEIKSAYENLME--- 290
           D ++ LGL+P A+K ++K AY+RLALKYHPDV  G+        F++I  AYE L+    
Sbjct: 12  DPYSTLGLSPGATKHEIKKAYRRLALKYHPDVCEGNLCITN---FQQINHAYETLLNNST 68

Query: 291 ----RFDMEELQTTDGY----DDGHDEWEEWMGFEG 374
               +F+ +     +G+    DD  ++WEEWMGFEG
Sbjct: 69  SQFGQFEDDLSDNLEGFMGVEDDSWEDWEEWMGFEG 104


>emb|CBI25192.3| unnamed protein product [Vitis vinifera]
          Length = 248

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 48/120 (40%), Positives = 67/120 (55%), Gaps = 11/120 (9%)
 Frame = +3

Query: 48  WTSSPANKKFDRCARFPTRSLPLSDDFAVLGLTPFASKTDVKHAYKRLALKYHPDVIRGD 227
           W+   AN+   R +R  + SL L+D +  L + P AS+++VK A++RLAL+YHPDV RG 
Sbjct: 121 WSRKKANRS--RVSRV-SASLNLTDPYKTLRIQPGASESEVKKAFRRLALQYHPDVCRGS 177

Query: 228 HVYDKPEIFKEIKSAYENLMERFDMEELQTTD----------GYDDGHDE-WEEWMGFEG 374
           +   +   F  I  AY+ +M  F  E   T +          GYDD   E WEEWMG+EG
Sbjct: 178 NCGVQ---FHLINEAYDTVMSNFREESTSTGEMLEEMDESMRGYDDPDWELWEEWMGWEG 234


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