BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026864
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...   103   1e-20
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]   103   1e-20
ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
ref|XP_002318725.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa h...    90   2e-16

>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase
           [Vitis vinifera]
          Length = 2177

 Score =  103 bits (258), Expect = 1e-20
 Identities = 63/149 (42%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
 Frame = +2

Query: 8   GATDEVLAFIXXXXXXXXXXXXEIQKLLNAIPSGMFDQLVSICRHIKDFQDWGVATG--- 178
           GA DE+LA +            EI++LLN IP+ +FDQLVSI R I DFQD G A G   
Sbjct: 145 GAADEILAVLKNETVKNPDKKKEIERLLNPIPNHIFDQLVSIGRLITDFQDGGDAAGPTA 204

Query: 179 --GEDLIDVDIGVAVXXXXXXXXXXXXXXYQVQXXXXXXXXXGIGIGAHEFGATMQLGSG 352
             G+D +D D+GVAV                VQ            +        MQ+G G
Sbjct: 205 ANGDDALDDDVGVAVEFEENEDEEEESDLDMVQEDEEEDDD----VMEQNGSGAMQMGGG 260

Query: 353 IDDEVMKDANEGKTVNVKEIDAYWLQREI 439
           IDD+ M++ANEG T+NV++IDAYWLQR+I
Sbjct: 261 IDDDDMQEANEGMTLNVQDIDAYWLQRKI 289


>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
          Length = 2144

 Score =  103 bits (258), Expect = 1e-20
 Identities = 63/149 (42%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
 Frame = +2

Query: 8   GATDEVLAFIXXXXXXXXXXXXEIQKLLNAIPSGMFDQLVSICRHIKDFQDWGVATG--- 178
           GA DE+LA +            EI++LLN IP+ +FDQLVSI R I DFQD G A G   
Sbjct: 145 GAADEILAVLKNETVKNPDKKKEIERLLNPIPNHIFDQLVSIGRLITDFQDGGDAAGPTA 204

Query: 179 --GEDLIDVDIGVAVXXXXXXXXXXXXXXYQVQXXXXXXXXXGIGIGAHEFGATMQLGSG 352
             G+D +D D+GVAV                VQ            +        MQ+G G
Sbjct: 205 ANGDDALDDDVGVAVEFEENEDEEEESDLDMVQEDEEEDDD----VMEQNGSGAMQMGGG 260

Query: 353 IDDEVMKDANEGKTVNVKEIDAYWLQREI 439
           IDD+ M++ANEG T+NV++IDAYWLQR+I
Sbjct: 261 IDDDDMQEANEGMTLNVQDIDAYWLQRKI 289


>ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|222869248|gb|EEF06379.1|
           predicted protein [Populus trichocarpa]
          Length = 2157

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 57/148 (38%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
 Frame = +2

Query: 11  ATDEVLAFIXXXXXXXXXXXXEIQKLLNAIPSGMFDQLVSICRHIKDFQDWGVATG---- 178
           A DE+LA +            EI+KLLN IP+ MF+Q+VSI R I D+QD G   G    
Sbjct: 145 AADEILAVLKNESVRTQDKRKEIEKLLNPIPNNMFEQVVSIGRLITDYQDAGDGAGASVA 204

Query: 179 -GEDLIDVDIGVAVXXXXXXXXXXXXXXYQVQXXXXXXXXXGIGIGAHEFGATMQLGSGI 355
            G+D +D  +GVAV                +           +  G       MQ+G GI
Sbjct: 205 NGDDALDDGVGVAVEFDEDNEDEEEDSDLDMVPEEEEEEDDVVEPGG---SGAMQMGGGI 261

Query: 356 DDEVMKDANEGKTVNVKEIDAYWLQREI 439
           DD+ M +ANEG  +NV++IDAYWLQR+I
Sbjct: 262 DDDEMGEANEGLNLNVQDIDAYWLQRKI 289


>ref|XP_002318725.1| predicted protein [Populus trichocarpa] gi|222859398|gb|EEE96945.1|
           predicted protein [Populus trichocarpa]
          Length = 2175

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 54/148 (36%), Positives = 75/148 (50%), Gaps = 5/148 (3%)
 Frame = +2

Query: 11  ATDEVLAFIXXXXXXXXXXXXEIQKLLNAIPSGMFDQLVSICRHIKDFQDWGVATG---- 178
           A DE+LA +            EI+KLLN IP+ MFDQ VSI + I D+QD G   G    
Sbjct: 145 AADEILAVLKNESVRTQDKRKEIEKLLNPIPNSMFDQFVSIGKLITDYQDGGDGAGVSVA 204

Query: 179 -GEDLIDVDIGVAVXXXXXXXXXXXXXXYQVQXXXXXXXXXGIGIGAHEFGATMQLGSGI 355
            G+D+++ ++GVAV                +             +        MQ+G  I
Sbjct: 205 NGDDVLNDNVGVAVEFDEDNEDEEGDSDLDMVPQEEEEEEEDDDVVEAGGSGAMQMGGRI 264

Query: 356 DDEVMKDANEGKTVNVKEIDAYWLQREI 439
           DD+ M+ ANEG  +NV++IDAYWLQR+I
Sbjct: 265 DDDEMRGANEGMNLNVQDIDAYWLQRKI 292


>ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Medicago
           truncatula] gi|355485040|gb|AES66243.1| U5 small nuclear
           ribonucleoprotein 200 kDa helicase [Medicago truncatula]
          Length = 2223

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 62/154 (40%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
 Frame = +2

Query: 8   GATDEVLAFIXXXXXXXXXXXXEIQKLLNAIPSGMFDQLVSICRHIKDFQDWGVATGG-- 181
           GA DE+LA +            +I+KLLN IP+ +FDQLVSI + I DFQ+ G   GG  
Sbjct: 148 GAADEILAVLKNDTLKNVDKKKDIEKLLNTIPNQVFDQLVSIGKLITDFQEVGEVGGGGG 207

Query: 182 -----EDLIDVDIGVAVXXXXXXXXXXXXXXYQV---QXXXXXXXXXGIGIGAHEFGATM 337
                +  +D D+GVAV                V             G G G       M
Sbjct: 208 GGGEVDGGLDDDVGVAVEFEENEDDEDEESDLDVVQEDEEDEDDVVEGNGSGG------M 261

Query: 338 QLGSGIDDEVMKDANEGKTVNVKEIDAYWLQREI 439
           Q+G GIDDE M+DANEG  +NV++IDAYWLQR+I
Sbjct: 262 QMG-GIDDEDMEDANEGMNLNVQDIDAYWLQRKI 294