BLASTX nr result

ID: Cimicifuga21_contig00026742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026742
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526938.1| hypothetical protein RCOM_0530890 [Ricinus c...   185   5e-45
gb|ADC68622.1| hypothetical protein [Solanum lycopersicum] gi|36...   160   1e-37
ref|XP_002300083.1| predicted protein [Populus trichocarpa] gi|2...   148   1e-33
ref|XP_002268221.1| PREDICTED: uncharacterized protein LOC100256...   143   2e-32
ref|XP_002870685.1| hypothetical protein ARALYDRAFT_493913 [Arab...   140   2e-31

>ref|XP_002526938.1| hypothetical protein RCOM_0530890 [Ricinus communis]
           gi|223533690|gb|EEF35425.1| hypothetical protein
           RCOM_0530890 [Ricinus communis]
          Length = 180

 Score =  185 bits (470), Expect = 5e-45
 Identities = 96/179 (53%), Positives = 118/179 (65%), Gaps = 18/179 (10%)
 Frame = -2

Query: 614 MRREGHQHGMVRTCMILPSPLNPRPNSRVVNKFESQPIAGLFTKVSSKSTNHSKYTGKCG 435
           M+REG QHGMVRTC ILPSP NPRP+SR +N+F+S P AGLFTKV  + TNHSK+TGKCG
Sbjct: 1   MKREGRQHGMVRTCRILPSPWNPRPDSRFINRFDSPPTAGLFTKVLPRPTNHSKFTGKCG 60

Query: 434 KPRCEECRTHPVCKSKSKAKGTQKLKSCDVAKNHRLIAWRIVDER---GYIGKSATGILG 264
           KPRC  C  HP CKSK K KGTQKLKS DV  N+RL++WR+VD +    + G SA+ IL 
Sbjct: 61  KPRCNGCHMHPSCKSKDKTKGTQKLKSHDVLSNYRLMSWRVVDGKPGLNFSGFSASRILD 120

Query: 263 SMSND--YLXXXXXXXXXXDKVGMG------------FYDVGFVLEEVE-EEDWCIVGE 132
            M +D  Y+            V  G            + DVGF+L++VE +EDWC+V E
Sbjct: 121 HMDDDERYVDDDDYEETIAANVDDGDDDDIDDGDDTSYCDVGFLLDQVEGDEDWCLVAE 179


>gb|ADC68622.1| hypothetical protein [Solanum lycopersicum]
           gi|365222884|gb|AEW69794.1| Hop-interacting protein
           THI031 [Solanum lycopersicum]
          Length = 191

 Score =  160 bits (406), Expect = 1e-37
 Identities = 92/191 (48%), Positives = 106/191 (55%), Gaps = 32/191 (16%)
 Frame = -2

Query: 614 MRREGHQHGMVRTCMILPSPLNPRPNSRVVNKFESQPIAGLFTKVSSKSTNHSKYTGKCG 435
           MRREG QHGMVRT  ILPSP NPRP  R +NK  S P AGLF KV +K +NHSK+TGKCG
Sbjct: 1   MRREGRQHGMVRTYPILPSPWNPRPEPRYMNKSNSPPTAGLFAKVPTKPSNHSKFTGKCG 60

Query: 434 KPRCEECRTHPVCKSKSKAKGTQKLKSC-DVAKNHRLIAWRIVDER---GYIGKSATGIL 267
           +PRC  C  HP  KSK K KGTQKLK C DV     L+ WR+VD R    + G SATGIL
Sbjct: 61  RPRCTSCHVHPAAKSKDKTKGTQKLKGCGDVVS---LVTWRVVDARPGFNFSGFSATGIL 117

Query: 266 GSMSNDYLXXXXXXXXXXDKVG---------------------------MGFYDVGFVLE 168
             + +D            +  G                           M F +VGFV E
Sbjct: 118 DHLDSDSSYYMDHEIYYDEDYGYGDQELVVDSDGSPAIGVEIEDNDEEKMSFCEVGFVWE 177

Query: 167 EVEE-EDWCIV 138
           +VEE EDWC+V
Sbjct: 178 DVEEDEDWCVV 188


>ref|XP_002300083.1| predicted protein [Populus trichocarpa] gi|222847341|gb|EEE84888.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score =  148 bits (373), Expect = 1e-33
 Identities = 85/195 (43%), Positives = 109/195 (55%), Gaps = 34/195 (17%)
 Frame = -2

Query: 614 MRREGHQHGMVRTCMILPSPLNPRPNS-RVVNKFESQPIAGLFTKVSSKSTNHSKYTGKC 438
           MRREG  HGMVR   +LP P NP+P   R  NKF++   AGLFTKVSSK TNHSK+TGKC
Sbjct: 1   MRREGRPHGMVRAYAVLPPPWNPKPGGDRKFNKFDTPTTAGLFTKVSSKPTNHSKFTGKC 60

Query: 437 GKPRCEECRTHPVCKSKSKAKGTQKLKSCDVAKNH--RLIAWRIVDER---GYIGKSATG 273
           GKPRC EC   P CK+K K KG+ K+KS DV  N   + IAWR+V+ R      G SATG
Sbjct: 61  GKPRCLECHLQPCCKAKHKTKGSHKVKSQDVLSNSNAQFIAWRVVNGRHGSNLSGFSATG 120

Query: 272 ILGSMSN---------------------------DYLXXXXXXXXXXDKVGMGFYDVGFV 174
           +L  +++                           +Y+          ++ GM + DVGF 
Sbjct: 121 MLNHLASTGDHDHADEVDDSGHENDQEFVDDDDENYIGDGVNIKNIEEEDGMSYCDVGFE 180

Query: 173 LEEVE-EEDWCIVGE 132
           ++  E +EDWC+V E
Sbjct: 181 VDLAEGDEDWCLVAE 195


>ref|XP_002268221.1| PREDICTED: uncharacterized protein LOC100256024 [Vitis vinifera]
          Length = 218

 Score =  143 bits (361), Expect = 2e-32
 Identities = 76/171 (44%), Positives = 102/171 (59%), Gaps = 4/171 (2%)
 Frame = -2

Query: 614 MRREGHQHGMVRTCMILPSPLNPRPNSRVVNKFESQPIAGLFTKVSSKSTNHSKYTGKCG 435
           M+REG QHGMVR+  ILP P NP    R VN+F+S P AG+FTKVSSK TNHSK+TG C 
Sbjct: 1   MKREGRQHGMVRSYRILPPPWNPNSQERFVNRFDSPPTAGVFTKVSSKPTNHSKFTGACC 60

Query: 434 KPRCEECRTHPVCKSKSKAKGTQKLKSCDVAKNHRLIAWRIVDER---GYIGKSATGILG 264
           + +C +C   P CKSK K KGTQK+K  D+  NHRLI WR+V+ +    + G SAT +L 
Sbjct: 61  RTKCLDCHLLPACKSKGKTKGTQKMKPRDMVSNHRLITWRLVEGKPGLNFNGISATEVLD 120

Query: 263 SMSNDYLXXXXXXXXXXDKVGMGFYDVGFVLEEVEEE-DWCIVGEF*SQEL 114
            +S +                  FYD  +  +E E+E + C  G +  +++
Sbjct: 121 HLSRE-----------------DFYDDQYYNDEDEDEVEACYDGHYDEEKI 154


>ref|XP_002870685.1| hypothetical protein ARALYDRAFT_493913 [Arabidopsis lyrata subsp.
           lyrata] gi|297316521|gb|EFH46944.1| hypothetical protein
           ARALYDRAFT_493913 [Arabidopsis lyrata subsp. lyrata]
          Length = 213

 Score =  140 bits (353), Expect = 2e-31
 Identities = 70/128 (54%), Positives = 90/128 (70%), Gaps = 5/128 (3%)
 Frame = -2

Query: 614 MRREGHQHGMVRTCMILPSPLNPRPNSRVVNKFESQPIAGLFTKVSSKSTNHSKYTGKCG 435
           M+REG QHGMVRT  ILP  LNPRP S++VN   S+P AGLFTKV+SK TNHSK+TGKCG
Sbjct: 1   MKREGKQHGMVRTYRILPPSLNPRPESKLVNPLTSRPTAGLFTKVTSKPTNHSKFTGKCG 60

Query: 434 KPRCEECRTHPVCKSKSKAKGTQKLKSCDVAKNHRLIAWRIV-----DERGYIGKSATGI 270
           + RC +C  HP+ KSK+K KG+ K++S DV   ++++ W++            G SATGI
Sbjct: 61  QARCLDCHMHPITKSKAKTKGSSKVRSNDV--TYKMLTWQVAAGGPRPGLKLSGFSATGI 118

Query: 269 LGSMSNDY 246
           L  MS+DY
Sbjct: 119 LDLMSDDY 126


Top