BLASTX nr result
ID: Cimicifuga21_contig00026700
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00026700
(370 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 211 5e-53
ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 211 5e-53
ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250... 211 7e-53
emb|CBI31979.3| unnamed protein product [Vitis vinifera] 211 7e-53
ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinu... 205 3e-51
>ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
sativus]
Length = 806
Score = 211 bits (537), Expect = 5e-53
Identities = 99/125 (79%), Positives = 115/125 (92%), Gaps = 2/125 (1%)
Frame = +1
Query: 1 GMLGGGMHRVGSSSAV--KVDALLPKALRSTVVLDVHNISCGVRHSVLVTRQGEMFSWGE 174
G+LGGG+++VGS ++ K+DALLPKAL STVVLDVH I+CG RH+VLVTRQGE+FSWGE
Sbjct: 257 GLLGGGVNKVGSQCSLNSKLDALLPKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGE 316
Query: 175 ESGGRLGHGVEADVSQPKLIETLTGMNVELVACGEYHTCAVTLSGDLYTWGDGSHNAGLL 354
ESGGRLGHGVEADVS PK+I+TL+G NVELVACGEYHTCAVTLSGDLYTWGDG+HN GLL
Sbjct: 317 ESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLL 376
Query: 355 GHGND 369
GHG++
Sbjct: 377 GHGSE 381
Score = 76.6 bits (187), Expect = 2e-12
Identities = 48/137 (35%), Positives = 69/137 (50%), Gaps = 17/137 (12%)
Frame = +1
Query: 10 GGGMHRVGS-SSAVKVDALLPKALRSTVV-LDVHNISCGVRHSVLVTRQGEMFSWGEESG 183
G G H G +V +P+ + + + V ISCG H+ +VT G++F++G+ S
Sbjct: 367 GDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSF 426
Query: 184 GRLGHGVEADVSQPKLIETLTGMNVELVACGEYHTCAVT---------------LSGDLY 318
G LGHG + P+ +ETL G+ VACG +HT A S LY
Sbjct: 427 GALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLY 486
Query: 319 TWGDGSHNAGLLGHGND 369
TWGDG + G LGHG++
Sbjct: 487 TWGDG--DKGRLGHGDN 501
Score = 59.3 bits (142), Expect = 3e-07
Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Frame = +1
Query: 61 LLPKALRSTVVLDVHNISCGVRHSVLVTRQGEMFSWGEESGGRLGHGVEADVSQPKLIE- 237
L+P+ + + + + ++CG +V +T G +++ G + G+LG A+ P +E
Sbjct: 505 LVPECVAALMEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSAT-ANGKLPTCVEG 563
Query: 238 TLTGMNVELVACGEYHTCAVTLSGDLYTWGDGSHNAGLLGHGND 369
+ VE VACG YH +T ++YTWG G + G LGHG++
Sbjct: 564 EIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLN--GQLGHGDN 605
>ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101222790 [Cucumis sativus]
Length = 982
Score = 211 bits (537), Expect = 5e-53
Identities = 99/125 (79%), Positives = 115/125 (92%), Gaps = 2/125 (1%)
Frame = +1
Query: 1 GMLGGGMHRVGSSSAV--KVDALLPKALRSTVVLDVHNISCGVRHSVLVTRQGEMFSWGE 174
G+LGGG+++VGS ++ K+DALLPKAL STVVLDVH I+CG RH+VLVTRQGE+FSWGE
Sbjct: 257 GLLGGGVNKVGSQCSLNSKLDALLPKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGE 316
Query: 175 ESGGRLGHGVEADVSQPKLIETLTGMNVELVACGEYHTCAVTLSGDLYTWGDGSHNAGLL 354
ESGGRLGHGVEADVS PK+I+TL+G NVELVACGEYHTCAVTLSGDLYTWGDG+HN GLL
Sbjct: 317 ESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLL 376
Query: 355 GHGND 369
GHG++
Sbjct: 377 GHGSE 381
Score = 76.3 bits (186), Expect = 3e-12
Identities = 48/137 (35%), Positives = 69/137 (50%), Gaps = 17/137 (12%)
Frame = +1
Query: 10 GGGMHRVGS-SSAVKVDALLPKALRSTVV-LDVHNISCGVRHSVLVTRQGEMFSWGEESG 183
G G H G +V +P+ + + + V ISCG H+ +VT G++F++G+ S
Sbjct: 367 GDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSF 426
Query: 184 GRLGHGVEADVSQPKLIETLTGMNVELVACGEYHTCAVT---------------LSGDLY 318
G LGHG + P+ +ETL G+ VACG +HT A S LY
Sbjct: 427 GALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLY 486
Query: 319 TWGDGSHNAGLLGHGND 369
TWGDG + G LGHG++
Sbjct: 487 TWGDG--DKGRLGHGDN 501
Score = 60.1 bits (144), Expect = 2e-07
Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Frame = +1
Query: 61 LLPKALRSTVVLDVHNISCGVRHSVLVTRQGEMFSWGEESGGRLGHGVEADVSQPKLIE- 237
L+P+ + + + + ++CG +V +T G +++ G + G+LG A+ P +E
Sbjct: 505 LVPECVAALIEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSAT-ANGKLPTCVEG 563
Query: 238 TLTGMNVELVACGEYHTCAVTLSGDLYTWGDGSHNAGLLGHGND 369
+ VE VACG YH +T ++YTWG G + G LGHG++
Sbjct: 564 EIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLN--GQLGHGDN 605
>ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
Length = 1047
Score = 211 bits (536), Expect = 7e-53
Identities = 94/123 (76%), Positives = 113/123 (91%)
Frame = +1
Query: 1 GMLGGGMHRVGSSSAVKVDALLPKALRSTVVLDVHNISCGVRHSVLVTRQGEMFSWGEES 180
G++G G+HRVGSSS+ K+DALLPKAL STVVLDVH+I+CG +H+VLVT++GE+FSWGEE
Sbjct: 261 GIMGAGVHRVGSSSSTKIDALLPKALESTVVLDVHSIACGGKHAVLVTKKGEVFSWGEEC 320
Query: 181 GGRLGHGVEADVSQPKLIETLTGMNVELVACGEYHTCAVTLSGDLYTWGDGSHNAGLLGH 360
G RLGHGVE DVS PKLI+ L GMN+ELVACGEYH+CAVTLSGDLYTWGDG+HN+GLLGH
Sbjct: 321 GSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVTLSGDLYTWGDGTHNSGLLGH 380
Query: 361 GND 369
G++
Sbjct: 381 GSE 383
Score = 76.6 bits (187), Expect = 2e-12
Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 17/136 (12%)
Frame = +1
Query: 10 GGGMHRVGS-SSAVKVDALLPKALRSTVV-LDVHNISCGVRHSVLVTRQGEMFSWGEESG 183
G G H G + +PK + + + V ++CG H+ +VT G++F++G+ +
Sbjct: 369 GDGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVACGPWHTAVVTSAGQLFTFGDGTF 428
Query: 184 GRLGHGVEADVSQPKLIETLTGMNVELVACGEYHTCAV---------------TLSGDLY 318
G LGHG + +S P+ +E L G VACG +HT AV + SG L+
Sbjct: 429 GALGHGDHSSMSIPREVEALRGQRTMRVACGVWHTAAVVELMIASSSFESSGSSSSGKLF 488
Query: 319 TWGDGSHNAGLLGHGN 366
TWGDG + G LGHG+
Sbjct: 489 TWGDG--DKGRLGHGD 502
Score = 65.5 bits (158), Expect = 4e-09
Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
Frame = +1
Query: 49 KVDALLPKALRSTVVLDVHNISCGVRHSVLVTRQGEMFSWGEESGGRLGHGVEADVSQPK 228
K L+P+++ + + ++CG SV +T G +++ G G+LG V AD P
Sbjct: 503 KEPRLVPQSVTALINESFCQVACGHNLSVALTTSGRVYTMGSAVYGQLGSPV-ADGKIPT 561
Query: 229 LIE-TLTGMNVELVACGEYHTCAVTLSGDLYTWGDGSHNAGLLGHGND 369
L+E + VE VACG YH +T ++YTWG G++ G LGHG++
Sbjct: 562 LVEGKIANSFVEEVACGSYHVAVLTSKTEVYTWGKGTN--GQLGHGDN 607
>emb|CBI31979.3| unnamed protein product [Vitis vinifera]
Length = 429
Score = 211 bits (536), Expect = 7e-53
Identities = 94/123 (76%), Positives = 113/123 (91%)
Frame = +1
Query: 1 GMLGGGMHRVGSSSAVKVDALLPKALRSTVVLDVHNISCGVRHSVLVTRQGEMFSWGEES 180
G++G G+HRVGSSS+ K+DALLPKAL STVVLDVH+I+CG +H+VLVT++GE+FSWGEE
Sbjct: 261 GIMGAGVHRVGSSSSTKIDALLPKALESTVVLDVHSIACGGKHAVLVTKKGEVFSWGEEC 320
Query: 181 GGRLGHGVEADVSQPKLIETLTGMNVELVACGEYHTCAVTLSGDLYTWGDGSHNAGLLGH 360
G RLGHGVE DVS PKLI+ L GMN+ELVACGEYH+CAVTLSGDLYTWGDG+HN+GLLGH
Sbjct: 321 GSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVTLSGDLYTWGDGTHNSGLLGH 380
Query: 361 GND 369
G++
Sbjct: 381 GSE 383
>ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223533605|gb|EEF35343.1| Ran GTPase binding protein,
putative [Ricinus communis]
Length = 1100
Score = 205 bits (522), Expect = 3e-51
Identities = 93/123 (75%), Positives = 110/123 (89%)
Frame = +1
Query: 1 GMLGGGMHRVGSSSAVKVDALLPKALRSTVVLDVHNISCGVRHSVLVTRQGEMFSWGEES 180
G+LGGG HR GS VK+D+LLPKAL STVVLDV NI+CG RH+ LVT+QGE+FSWGEES
Sbjct: 273 GVLGGGAHRAGSGFGVKLDSLLPKALESTVVLDVQNIACGGRHAALVTKQGEVFSWGEES 332
Query: 181 GGRLGHGVEADVSQPKLIETLTGMNVELVACGEYHTCAVTLSGDLYTWGDGSHNAGLLGH 360
GGRLGHGV++DV PKLI++L+ +N+ELVACGEYHTCAVTLSGDLYTWGDG++N GLLGH
Sbjct: 333 GGRLGHGVDSDVLHPKLIDSLSNINIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGH 392
Query: 361 GND 369
GN+
Sbjct: 393 GNE 395
Score = 79.3 bits (194), Expect = 3e-13
Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 12/103 (11%)
Frame = +1
Query: 94 LDVHNISCGVRHSVLVTRQGEMFSWGEESGGRLGHGVEADVSQPKLIETLTGMNVELVAC 273
+ V +ISCG H+ +VT G++F++G+ + G LGHG VS P+ +E+L G+ AC
Sbjct: 411 IHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 470
Query: 274 GEYHTCAVT------------LSGDLYTWGDGSHNAGLLGHGN 366
G +HT AV SG L+TWGDG + G LGHG+
Sbjct: 471 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGD 511
Score = 61.2 bits (147), Expect = 8e-08
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Frame = +1
Query: 61 LLPKALRSTVVLDVHNISCGVRHSVLVTRQGEMFSWGEESGGRLGHGVEADVSQPKLIE- 237
L+P + + V + ++CG +V +T G +++ G G+LG+ +AD P +E
Sbjct: 516 LVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNP-QADGKLPNRVEG 574
Query: 238 TLTGMNVELVACGEYHTCAVTLSGDLYTWGDGSHNAGLLGHGN 366
L+ VE +ACG YH +T ++YTWG G++ G LGHG+
Sbjct: 575 RLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGAN--GRLGHGD 615
Score = 60.8 bits (146), Expect = 1e-07
Identities = 27/68 (39%), Positives = 41/68 (60%)
Frame = +1
Query: 100 VHNISCGVRHSVLVTRQGEMFSWGEESGGRLGHGVEADVSQPKLIETLTGMNVELVACGE 279
V I+CG H ++T + E+++WG+ + GRLGHG D + P L+E L V+ +ACG
Sbjct: 581 VEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIACGT 640
Query: 280 YHTCAVTL 303
T A+ L
Sbjct: 641 NFTAAICL 648
Score = 55.5 bits (132), Expect = 5e-06
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Frame = +1
Query: 64 LPKALRSTVVLDVHNISCGVRHSVLVTR------------QGEMFSWGEESGGRLGHGVE 207
+P+ + S L +CGV H+ V G++F+WG+ GRLGHG +
Sbjct: 453 IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK 512
Query: 208 ADVSQPKLIETLTGMNVELVACGEYHTCAVTLSGDLYTWG 327
P + L N VACG T A+T SG +YT G
Sbjct: 513 EAKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMG 552