BLASTX nr result

ID: Cimicifuga21_contig00026692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026692
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14971.3| unnamed protein product [Vitis vinifera]               59   3e-07
ref|XP_002278083.1| PREDICTED: probable spermidine synthase-like...    59   3e-07

>emb|CBI14971.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
 Frame = +2

Query: 20  MTSLPLCISS-QIRPLNPRPFQISLLFPSTYXXXXXXXXXXXXISTQFLSLTAKSQETHL 196
           M S PL ++S QIRP    P Q+SL F                 S +F  +TAK+Q THL
Sbjct: 1   MRSTPLGLASHQIRPFTLPPVQVSLHFLPRAPLNLKLYPKTPSPS-RFHPITAKAQHTHL 59

Query: 197 THPQTKSQEDGIPSDHVKVLAKFKSK 274
           +  QT++Q+DGIP D VK+L KFKS+
Sbjct: 60  STHQTRTQDDGIPVDLVKILVKFKSR 85


>ref|XP_002278083.1| PREDICTED: probable spermidine synthase-like [Vitis vinifera]
          Length = 334

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
 Frame = +2

Query: 20  MTSLPLCISS-QIRPLNPRPFQISLLFPSTYXXXXXXXXXXXXISTQFLSLTAKSQETHL 196
           M S PL ++S QIRP    P Q+SL F                 S +F  +TAK+Q THL
Sbjct: 1   MRSTPLGLASHQIRPFTLPPVQVSLHFLPRAPLNLKLYPKTPSPS-RFHPITAKAQHTHL 59

Query: 197 THPQTKSQEDGIPSDHVKVLAKFKSK 274
           +  QT++Q+DGIP D VK+L KFKS+
Sbjct: 60  STHQTRTQDDGIPVDLVKILVKFKSR 85


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