BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026664
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608629.1| F-box protein [Medicago truncatula] gi|35550...    48   4e-11
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    42   6e-07
ref|XP_003593067.1| FBD-associated F-box protein [Medicago trunc...    44   8e-07
ref|XP_003599034.1| F-box/LRR-repeat protein [Medicago truncatul...    43   2e-06
ref|XP_003593072.1| F-box/LRR-repeat protein [Medicago truncatul...    42   2e-06

>ref|XP_003608629.1| F-box protein [Medicago truncatula] gi|355509684|gb|AES90826.1|
           F-box protein [Medicago truncatula]
          Length = 373

 Score = 47.8 bits (112), Expect(2) = 4e-11
 Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
 Frame = +3

Query: 3   KEVIETSVLSKRWRYLWTSLPFLNFNAKYFSHLVESG-------SDFVYQVLCRLQNSNI 161
           KE + TS+LSKRW +LW  +P L      F ++  +G       ++F++ VL  L  + I
Sbjct: 19  KESVATSILSKRWIHLWHHVPNL-----IFPNITVNGIQSNYTFNEFLFSVLIALDTNFI 73

Query: 162 HTFHIHLSY 188
           +TFH+H+ Y
Sbjct: 74  NTFHLHIHY 82



 Score = 44.7 bits (104), Expect(2) = 4e-11
 Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = +1

Query: 199 ISGASVYSWIREVVKRNVQELHLHFPNQDFGRLL-DFPLPLFTCKTLTSLAL 351
           +S  +V  WI  VV+R +  LHLH  N +F + L   P  +FTC+TL SL L
Sbjct: 91  LSFPNVTKWINLVVQRKLNHLHLHLDNGNFYKFLPKLPTSIFTCRTLVSLNL 142


>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 42.4 bits (98), Expect(2) = 6e-07
 Identities = 21/56 (37%), Positives = 32/56 (57%)
 Frame = +3

Query: 3   KEVIETSVLSKRWRYLWTSLPFLNFNAKYFSHLVESGSDFVYQVLCRLQNSNIHTF 170
           K+ + TS+LS++W +LW SL  L F+  YF    +   + V +VL    +SNI  F
Sbjct: 58  KDAVRTSILSRKWEHLWKSLSNLEFHQCYFKAKRKIFMNSVERVLLLRDSSNIEKF 113



 Score = 35.8 bits (81), Expect(2) = 6e-07
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +1

Query: 220 SWIREVVKRNVQELHLHFPNQDFGRLLDFPLPLFTCKTLTSLAL 351
           +W+   V RNV+EL ++F           PL LFTC TLT L +
Sbjct: 127 TWVSAAVNRNVKELCVNFYEGGESESFVSPLCLFTCATLTKLKI 170


>ref|XP_003593067.1| FBD-associated F-box protein [Medicago truncatula]
           gi|355482115|gb|AES63318.1| FBD-associated F-box protein
           [Medicago truncatula]
          Length = 466

 Score = 43.5 bits (101), Expect(2) = 8e-07
 Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
 Frame = +3

Query: 3   KEVIETSVLSKRWRYLWTSLPFLNFNAKYFSHLVESG---SDFVYQVLCRLQNSN---IH 164
           KE + TSVLSKRW  LW  LP ++F      + VES    ++FVY VL     S    I 
Sbjct: 36  KEAVATSVLSKRWTNLWHYLPNIDF-TDIRVNTVESNLRFNEFVYSVLVSRDASGSRFID 94

Query: 165 TFHIHLSY 188
           +FH+++ Y
Sbjct: 95  SFHLNIQY 102



 Score = 34.3 bits (77), Expect(2) = 8e-07
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 8/51 (15%)
 Frame = +1

Query: 223 WIREVVKRNVQELHL--------HFPNQDFGRLLDFPLPLFTCKTLTSLAL 351
           W+  VV+R ++ LHL        HF    +   L  P+ +FTCKTL SL L
Sbjct: 119 WVNSVVQRGLKYLHLRLRVPLPDHFSGYPYFPKL--PISIFTCKTLVSLNL 167


>ref|XP_003599034.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|358348641|ref|XP_003638353.1| F-box/LRR-repeat
           protein [Medicago truncatula]
           gi|355488082|gb|AES69285.1| F-box/LRR-repeat protein
           [Medicago truncatula] gi|355504288|gb|AES85491.1|
           F-box/LRR-repeat protein [Medicago truncatula]
          Length = 408

 Score = 42.7 bits (99), Expect(2) = 2e-06
 Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
 Frame = +3

Query: 3   KEVIETSVLSKRWRYLWTSLPFLNFNAKYFSHLVESGS---DFVYQVL 137
           KE + TS+LSKRW  LW SLP ++FN     + +ES S   D VY VL
Sbjct: 39  KEAVATSILSKRWNNLWLSLPNIDFNNIKIDN-IESNSRFNDSVYSVL 85



 Score = 33.5 bits (75), Expect(2) = 2e-06
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 13/60 (21%)
 Frame = +1

Query: 211 SVYSWIREVVKRNVQ-------------ELHLHFPNQDFGRLLDFPLPLFTCKTLTSLAL 351
           +V  WI  VV+R ++             +LHL   + D   L   P+ +FTC+TL SL L
Sbjct: 120 NVVKWINLVVQRRLKYLRLNLRLSYDDDDLHLDVDDYDNSYLPKLPITIFTCRTLVSLDL 179


>ref|XP_003593072.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355482120|gb|AES63323.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 335

 Score = 42.4 bits (98), Expect(2) = 2e-06
 Identities = 23/51 (45%), Positives = 30/51 (58%)
 Frame = +1

Query: 199 ISGASVYSWIREVVKRNVQELHLHFPNQDFGRLLDFPLPLFTCKTLTSLAL 351
           +S  +V  WI  VV+R +  LHLH  + D   L   P  +FTC+TL SLAL
Sbjct: 87  LSFPNVTKWINLVVQRKLNHLHLHL-DTDNNFLPKLPTSIFTCRTLVSLAL 136



 Score = 33.9 bits (76), Expect(2) = 2e-06
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
 Frame = +3

Query: 3   KEVIETSVLSKRWRYLWTSLPFLNFNAKYFSHL--VESGSDFVYQVLCRLQNSNIHTFHI 176
           KE + TS+LSKRW +LW  +P L F     + +  + + + FV+ V     NSN+     
Sbjct: 34  KESVATSILSKRWIHLWHHVPNLIFPEINLNDIQSIYTFNKFVFSV-----NSNLAH--- 85

Query: 177 HLSYLFMDFW 206
           HLS+  +  W
Sbjct: 86  HLSFPNVTKW 95