BLASTX nr result

ID: Cimicifuga21_contig00026661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026661
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265436.1| PREDICTED: E3 ubiquitin-protein ligase BAH1 ...    77   2e-12
emb|CAN83652.1| hypothetical protein VITISV_015455 [Vitis vinifera]    77   2e-12
ref|XP_002523067.1| ubiquitin-protein ligase, putative [Ricinus ...    73   3e-11
ref|XP_003521565.1| PREDICTED: E3 ubiquitin-protein ligase BAH1-...    72   4e-11
ref|XP_003521564.1| PREDICTED: E3 ubiquitin-protein ligase BAH1-...    72   4e-11

>ref|XP_002265436.1| PREDICTED: E3 ubiquitin-protein ligase BAH1 [Vitis vinifera]
           gi|297743873|emb|CBI36843.3| unnamed protein product
           [Vitis vinifera]
          Length = 324

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 38/68 (55%), Positives = 45/68 (66%)
 Frame = -1

Query: 204 MKFCKKYQEFMQEQQKELPGVGFXXXXXXXXKCRRHVQSQNLESGDRVIETSSSTCPHQC 25
           MKFCKKYQE+MQ Q+K+LPGVGF        +CRR +Q Q    G  V++    TCPH C
Sbjct: 1   MKFCKKYQEYMQAQEKKLPGVGFKKLKKILKRCRRDLQIQKGLEG--VVDI--PTCPHHC 56

Query: 24  TVCDGTFF 1
            VCDGTFF
Sbjct: 57  QVCDGTFF 64


>emb|CAN83652.1| hypothetical protein VITISV_015455 [Vitis vinifera]
          Length = 239

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 38/68 (55%), Positives = 45/68 (66%)
 Frame = -1

Query: 204 MKFCKKYQEFMQEQQKELPGVGFXXXXXXXXKCRRHVQSQNLESGDRVIETSSSTCPHQC 25
           MKFCKKYQE+MQ Q+K+LPGVGF        +CRR +Q Q    G  V++    TCPH C
Sbjct: 1   MKFCKKYQEYMQAQEKKLPGVGFKKLKKILKRCRRDLQIQKGLEG--VVDI--PTCPHHC 56

Query: 24  TVCDGTFF 1
            VCDGTFF
Sbjct: 57  QVCDGTFF 64


>ref|XP_002523067.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223537629|gb|EEF39252.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 330

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/68 (48%), Positives = 40/68 (58%)
 Frame = -1

Query: 204 MKFCKKYQEFMQEQQKELPGVGFXXXXXXXXKCRRHVQSQNLESGDRVIETSSSTCPHQC 25
           MKFCK YQE+MQ Q+KELPG+GF        KCR+ ++S      +         CPH C
Sbjct: 1   MKFCKTYQEYMQNQEKELPGLGFKKLKKILKKCRKDLESHQQLDNNGSPSAHVQHCPHHC 60

Query: 24  TVCDGTFF 1
            VCDGTFF
Sbjct: 61  PVCDGTFF 68


>ref|XP_003521565.1| PREDICTED: E3 ubiquitin-protein ligase BAH1-like isoform 2 [Glycine
           max]
          Length = 322

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/68 (52%), Positives = 42/68 (61%)
 Frame = -1

Query: 204 MKFCKKYQEFMQEQQKELPGVGFXXXXXXXXKCRRHVQSQNLESGDRVIETSSSTCPHQC 25
           MKFCKKYQE+MQ Q+K+LPGVGF        KCRR+  SQ           ++ TCP  C
Sbjct: 1   MKFCKKYQEYMQGQEKKLPGVGFKKLKKILKKCRRNSSSQK----PLHASLAAKTCPDHC 56

Query: 24  TVCDGTFF 1
            VCDGTFF
Sbjct: 57  PVCDGTFF 64


>ref|XP_003521564.1| PREDICTED: E3 ubiquitin-protein ligase BAH1-like isoform 1 [Glycine
           max]
          Length = 324

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/68 (52%), Positives = 42/68 (61%)
 Frame = -1

Query: 204 MKFCKKYQEFMQEQQKELPGVGFXXXXXXXXKCRRHVQSQNLESGDRVIETSSSTCPHQC 25
           MKFCKKYQE+MQ Q+K+LPGVGF        KCRR+  SQ           ++ TCP  C
Sbjct: 1   MKFCKKYQEYMQGQEKKLPGVGFKKLKKILKKCRRNSSSQK----PLHASLAAKTCPDHC 56

Query: 24  TVCDGTFF 1
            VCDGTFF
Sbjct: 57  PVCDGTFF 64


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