BLASTX nr result

ID: Cimicifuga21_contig00026618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026618
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528761.1| isocitrate dehydrogenase, putative [Ricinus ...   226   2e-57
ref|XP_004134829.1| PREDICTED: isocitrate dehydrogenase [NAD] re...   225   3e-57
ref|XP_004158894.1| PREDICTED: LOW QUALITY PROTEIN: isocitrate d...   223   2e-56
ref|XP_002265376.2| PREDICTED: isocitrate dehydrogenase [NAD] re...   223   2e-56
ref|XP_002310697.1| predicted protein [Populus trichocarpa] gi|2...   221   6e-56

>ref|XP_002528761.1| isocitrate dehydrogenase, putative [Ricinus communis]
           gi|223531764|gb|EEF33583.1| isocitrate dehydrogenase,
           putative [Ricinus communis]
          Length = 372

 Score =  226 bits (575), Expect = 2e-57
 Identities = 118/153 (77%), Positives = 122/153 (79%)
 Frame = +1

Query: 1   GIGPLVTGAVEQVMEAMHAPVYFERYDVHGDMTKVPQEVIDSIKKNKVCLKGGLATPVGG 180
           GIGPLVTGAVEQVMEAMHAPVYFERY+VHGDM KVP EVI+SIKKNKVCLKGGLATP+GG
Sbjct: 52  GIGPLVTGAVEQVMEAMHAPVYFERYEVHGDMKKVPAEVIESIKKNKVCLKGGLATPMGG 111

Query: 181 GVSSLNVQLRKELDLYASXXXXXXXXXXXXXXXXXXXXXXXXDLYASLVNCFNLPGLPTR 360
           GVSSLNVQLRKELD                             LYASLVNCFNLPGLPTR
Sbjct: 112 GVSSLNVQLRKELD-----------------------------LYASLVNCFNLPGLPTR 142

Query: 361 HENVDIVVIRENTEGEYAGLEHEVVPGVVESLK 459
           HENVDIVVIRENTEGEY+GLEHEVVPGVVESLK
Sbjct: 143 HENVDIVVIRENTEGEYSGLEHEVVPGVVESLK 175


>ref|XP_004134829.1| PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1,
           mitochondrial-like [Cucumis sativus]
          Length = 381

 Score =  225 bits (573), Expect = 3e-57
 Identities = 116/153 (75%), Positives = 122/153 (79%)
 Frame = +1

Query: 1   GIGPLVTGAVEQVMEAMHAPVYFERYDVHGDMTKVPQEVIDSIKKNKVCLKGGLATPVGG 180
           GIGPLVTGAVEQVM+AMHAPVYFE++++HGDM KVPQEVIDSIKKNKVCLKGGL TPVGG
Sbjct: 61  GIGPLVTGAVEQVMDAMHAPVYFEKFEIHGDMKKVPQEVIDSIKKNKVCLKGGLVTPVGG 120

Query: 181 GVSSLNVQLRKELDLYASXXXXXXXXXXXXXXXXXXXXXXXXDLYASLVNCFNLPGLPTR 360
           GVSSLNVQLRKELD                             LYASLVNCFNLPGLPTR
Sbjct: 121 GVSSLNVQLRKELD-----------------------------LYASLVNCFNLPGLPTR 151

Query: 361 HENVDIVVIRENTEGEYAGLEHEVVPGVVESLK 459
           HENVDIVVIRENTEGEY+GLEHEVVPGVVESLK
Sbjct: 152 HENVDIVVIRENTEGEYSGLEHEVVPGVVESLK 184


>ref|XP_004158894.1| PREDICTED: LOW QUALITY PROTEIN: isocitrate dehydrogenase [NAD]
           regulatory subunit 1, mitochondrial-like [Cucumis
           sativus]
          Length = 272

 Score =  223 bits (567), Expect = 2e-56
 Identities = 115/153 (75%), Positives = 121/153 (79%)
 Frame = +1

Query: 1   GIGPLVTGAVEQVMEAMHAPVYFERYDVHGDMTKVPQEVIDSIKKNKVCLKGGLATPVGG 180
           GIGPLVTGAVEQVM+AMHAPVYFE++++HGDM KVPQEVIDSIK NKVCLKGGL TPVGG
Sbjct: 61  GIGPLVTGAVEQVMDAMHAPVYFEKFEIHGDMKKVPQEVIDSIKXNKVCLKGGLVTPVGG 120

Query: 181 GVSSLNVQLRKELDLYASXXXXXXXXXXXXXXXXXXXXXXXXDLYASLVNCFNLPGLPTR 360
           GVSSLNVQLRKELD                             LYASLVNCFNLPGLPTR
Sbjct: 121 GVSSLNVQLRKELD-----------------------------LYASLVNCFNLPGLPTR 151

Query: 361 HENVDIVVIRENTEGEYAGLEHEVVPGVVESLK 459
           HENVDIVVIRENTEGEY+GLEHEVVPGVVESLK
Sbjct: 152 HENVDIVVIRENTEGEYSGLEHEVVPGVVESLK 184


>ref|XP_002265376.2| PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1,
           mitochondrial-like [Vitis vinifera]
          Length = 375

 Score =  223 bits (567), Expect = 2e-56
 Identities = 114/153 (74%), Positives = 123/153 (80%)
 Frame = +1

Query: 1   GIGPLVTGAVEQVMEAMHAPVYFERYDVHGDMTKVPQEVIDSIKKNKVCLKGGLATPVGG 180
           GIGPLVTGAVEQVM+AMHAPVYFERY+VHGDM KVP+EV++SI+KNKVCLKGGLATP+GG
Sbjct: 55  GIGPLVTGAVEQVMDAMHAPVYFERYEVHGDMKKVPEEVLESIRKNKVCLKGGLATPMGG 114

Query: 181 GVSSLNVQLRKELDLYASXXXXXXXXXXXXXXXXXXXXXXXXDLYASLVNCFNLPGLPTR 360
           GVSSLNVQLRKELD                             LYASLVNCFNLPGLPTR
Sbjct: 115 GVSSLNVQLRKELD-----------------------------LYASLVNCFNLPGLPTR 145

Query: 361 HENVDIVVIRENTEGEYAGLEHEVVPGVVESLK 459
           H+NVDIVVIRENTEGEY+GLEHEVVPGVVESLK
Sbjct: 146 HQNVDIVVIRENTEGEYSGLEHEVVPGVVESLK 178


>ref|XP_002310697.1| predicted protein [Populus trichocarpa] gi|222853600|gb|EEE91147.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  221 bits (562), Expect = 6e-56
 Identities = 115/153 (75%), Positives = 120/153 (78%)
 Frame = +1

Query: 1   GIGPLVTGAVEQVMEAMHAPVYFERYDVHGDMTKVPQEVIDSIKKNKVCLKGGLATPVGG 180
           GIGPLVT AVEQVMEAMHAPVYFE+YD+HGDM +VP EVI+SIKKNKVCLKGGLATP+GG
Sbjct: 46  GIGPLVTNAVEQVMEAMHAPVYFEKYDIHGDMMRVPSEVIESIKKNKVCLKGGLATPMGG 105

Query: 181 GVSSLNVQLRKELDLYASXXXXXXXXXXXXXXXXXXXXXXXXDLYASLVNCFNLPGLPTR 360
           GVSSLNVQLRKELD                             LYASLVNCFNL GLPTR
Sbjct: 106 GVSSLNVQLRKELD-----------------------------LYASLVNCFNLQGLPTR 136

Query: 361 HENVDIVVIRENTEGEYAGLEHEVVPGVVESLK 459
           HENVDIVVIRENTEGEYAGLEHEVVPGVVESLK
Sbjct: 137 HENVDIVVIRENTEGEYAGLEHEVVPGVVESLK 169


Top