BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026603
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264233.2| PREDICTED: photosystem I reaction center sub...   114   1e-23
emb|CAN74757.1| hypothetical protein VITISV_026412 [Vitis vinifera]   111   5e-23
gb|AFS88925.1| chloroplast photosystem I reaction center subunit...   110   1e-22
gb|AFW90564.1| photosystem I reaction center V (chloroplast) [So...   106   2e-21
gb|AFS88924.1| chloroplast photosystem I reaction center subunit...   106   2e-21

>ref|XP_002264233.2| PREDICTED: photosystem I reaction center subunit V, chloroplastic
           [Vitis vinifera] gi|296090036|emb|CBI39855.3| unnamed
           protein product [Vitis vinifera]
          Length = 194

 Score =  114 bits (284), Expect = 1e-23
 Identities = 68/114 (59%), Positives = 76/114 (66%), Gaps = 9/114 (7%)
 Frame = +1

Query: 10  TSALFSTPA------TIQK--TPQSFQGLRPF-KPTDSFXXXXXXXXXXXXXXXPASRVG 162
           +SA FS P       T+QK    QSFQGLRP  KPTD                 P    G
Sbjct: 36  SSAFFSAPTFSSAATTLQKHLPHQSFQGLRPLSKPTD----LSLTIPRMSTRPIPKRSAG 91

Query: 163 VIKSELSPSLVISLSTGLSLFLGRFVFFNFQRENSAKQVPEQNGMTHFEAGDSR 324
           V+++EL+ SLVISLSTGLSLFLGRFVFFNFQREN AKQVP+QNG+THFEAGDSR
Sbjct: 92  VVRAELNTSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPQQNGLTHFEAGDSR 145


>emb|CAN74757.1| hypothetical protein VITISV_026412 [Vitis vinifera]
          Length = 161

 Score =  111 bits (278), Expect = 5e-23
 Identities = 67/114 (58%), Positives = 75/114 (65%), Gaps = 9/114 (7%)
 Frame = +1

Query: 10  TSALFSTPA------TIQK--TPQSFQGLRPF-KPTDSFXXXXXXXXXXXXXXXPASRVG 162
           +SA FS P       T+QK    Q FQGLRP  KPTD                 P    G
Sbjct: 3   SSAFFSAPTFSSAATTLQKHLPHQYFQGLRPLSKPTD----LSLTIPRMSTRPIPKRSAG 58

Query: 163 VIKSELSPSLVISLSTGLSLFLGRFVFFNFQRENSAKQVPEQNGMTHFEAGDSR 324
           V+++EL+ SLVISLSTGLSLFLGRFVFFNFQREN AKQVP+QNG+THFEAGDSR
Sbjct: 59  VVRAELNTSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPQQNGLTHFEAGDSR 112


>gb|AFS88925.1| chloroplast photosystem I reaction center subunit V-2 [Musa AB
           Group] gi|421958217|gb|AFX72947.1| photosystem I
           reaction center subunit V-2 [Musa AB Group]
          Length = 160

 Score =  110 bits (275), Expect = 1e-22
 Identities = 66/113 (58%), Positives = 78/113 (69%), Gaps = 8/113 (7%)
 Frame = +1

Query: 10  TSALFSTP----ATIQKTPQSFQGLRPFKPTDSFXXXXXXXXXXXXXXXPASRV---GVI 168
           TS+LF+ P    + +  +  SF+GLRP KPTDS                P  RV   G I
Sbjct: 3   TSSLFTYPMQKGSILTPSSTSFRGLRPLKPTDS----SQFPQTRAISIKPVRRVRKPGGI 58

Query: 169 KSELSPSLVISLSTGLSLFLGRFVFFNFQRENSAKQ-VPEQNGMTHFEAGDSR 324
           ++EL+PSLVISLSTGLSLFLGRFVFFNFQREN AKQ +PEQNG+THFEAGD+R
Sbjct: 59  RAELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGVTHFEAGDTR 111


>gb|AFW90564.1| photosystem I reaction center V (chloroplast) [Solanum tuberosum]
          Length = 146

 Score =  106 bits (265), Expect = 2e-21
 Identities = 63/107 (58%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
 Frame = +1

Query: 7   MTSALFSTPATIQKTPQSFQGLRPF-KPTDSFXXXXXXXXXXXXXXXPASRVGVIKSELS 183
           M SALFS P        +FQGLRP  KPTDS                  +R   +K+EL+
Sbjct: 1   MASALFSAP--------TFQGLRPLNKPTDS--SLFLNKPIAFKPITKKTRNLAVKAELN 50

Query: 184 PSLVISLSTGLSLFLGRFVFFNFQRENSAKQVPEQNGMTHFEAGDSR 324
           PS+VISLSTGLSLFLGRFVFFNFQREN AKQVP QNG++HFEAGD R
Sbjct: 51  PSIVISLSTGLSLFLGRFVFFNFQRENVAKQVPSQNGISHFEAGDVR 97


>gb|AFS88924.1| chloroplast photosystem I reaction center subunit V-1 [Musa AB
           Group] gi|421958219|gb|AFX72948.1| photosystem I
           reaction center subunit V-1 [Musa AB Group]
          Length = 150

 Score =  106 bits (265), Expect = 2e-21
 Identities = 61/93 (65%), Positives = 68/93 (73%), Gaps = 4/93 (4%)
 Frame = +1

Query: 58  SFQGLRPFKPTDSFXXXXXXXXXXXXXXXPASRV---GVIKSELSPSLVISLSTGLSLFL 228
           SF+GLRP KPTDS                P  RV   G I++EL+PSLVISLSTGLSLFL
Sbjct: 13  SFRGLRPLKPTDS----SQFPQTRAISIKPVRRVRKPGGIRAELNPSLVISLSTGLSLFL 68

Query: 229 GRFVFFNFQRENSAKQ-VPEQNGMTHFEAGDSR 324
           GRFVFFNFQREN AKQ +PEQNG+THFEAGD+R
Sbjct: 69  GRFVFFNFQRENVAKQGLPEQNGVTHFEAGDTR 101