BLASTX nr result

ID: Cimicifuga21_contig00026577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026577
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27286.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_002274259.1| PREDICTED: putative pentatricopeptide repeat...   106   2e-21
ref|XP_002322859.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|XP_004144262.1| PREDICTED: putative pentatricopeptide repeat...   104   7e-21
ref|XP_003614047.1| hypothetical protein MTR_5g044120 [Medicago ...   101   7e-20

>emb|CBI27286.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  106 bits (264), Expect = 2e-21
 Identities = 51/77 (66%), Positives = 60/77 (77%)
 Frame = +1

Query: 1   HGFVYSLERLHKVIETLCDSRLVFEAKYIVLKLKQWIKPNGVTYKYLIIGFCEIGDLIEA 180
           H + YSLE L+KV+E LC S+L  EAK IVLKLK WI P+GVTY YLI GFCE+GDLIEA
Sbjct: 167 HEYGYSLETLNKVVEVLCRSKLAVEAKEIVLKLKTWIPPSGVTYGYLIKGFCEVGDLIEA 226

Query: 181 SVFWNLLVDEGFELDID 231
           +  W+L+VDEGF   ID
Sbjct: 227 ANVWDLMVDEGFRPGID 243


>ref|XP_002274259.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g26500-like [Vitis vinifera]
          Length = 525

 Score =  106 bits (264), Expect = 2e-21
 Identities = 51/77 (66%), Positives = 60/77 (77%)
 Frame = +1

Query: 1   HGFVYSLERLHKVIETLCDSRLVFEAKYIVLKLKQWIKPNGVTYKYLIIGFCEIGDLIEA 180
           H + YSLE L+KV+E LC S+L  EAK IVLKLK WI P+GVTY YLI GFCE+GDLIEA
Sbjct: 169 HEYGYSLETLNKVVEVLCRSKLAVEAKEIVLKLKTWIPPSGVTYGYLIKGFCEVGDLIEA 228

Query: 181 SVFWNLLVDEGFELDID 231
           +  W+L+VDEGF   ID
Sbjct: 229 ANVWDLMVDEGFRPGID 245


>ref|XP_002322859.1| predicted protein [Populus trichocarpa] gi|222867489|gb|EEF04620.1|
           predicted protein [Populus trichocarpa]
          Length = 502

 Score =  105 bits (262), Expect = 4e-21
 Identities = 46/77 (59%), Positives = 62/77 (80%)
 Frame = +1

Query: 1   HGFVYSLERLHKVIETLCDSRLVFEAKYIVLKLKQWIKPNGVTYKYLIIGFCEIGDLIEA 180
           HG  Y +ERL+KV+E LC  +LV EAK++VLKLK WI+P+GVTY +L+ GFC++G+LIEA
Sbjct: 170 HGCEYRVERLNKVVENLCKGKLVEEAKFVVLKLKDWIRPDGVTYGWLVKGFCDVGELIEA 229

Query: 181 SVFWNLLVDEGFELDID 231
           S  WNL+VDE  E +I+
Sbjct: 230 SKIWNLMVDESIEPEIE 246


>ref|XP_004144262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g26500-like [Cucumis sativus]
          Length = 505

 Score =  104 bits (260), Expect = 7e-21
 Identities = 47/77 (61%), Positives = 62/77 (80%)
 Frame = +1

Query: 1   HGFVYSLERLHKVIETLCDSRLVFEAKYIVLKLKQWIKPNGVTYKYLIIGFCEIGDLIEA 180
           +GF YSL  L++V+E LC  +LV EAK++V+KL +WIK +GVTYK LI GFC +GDLIEA
Sbjct: 175 YGFCYSLVTLNRVVEKLCGCKLVDEAKFLVMKLNEWIKADGVTYKLLIKGFCNVGDLIEA 234

Query: 181 SVFWNLLVDEGFELDID 231
           S  WNL+VDEGFE +++
Sbjct: 235 SKMWNLMVDEGFEPEME 251


>ref|XP_003614047.1| hypothetical protein MTR_5g044120 [Medicago truncatula]
           gi|355515382|gb|AES97005.1| hypothetical protein
           MTR_5g044120 [Medicago truncatula]
          Length = 507

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/77 (61%), Positives = 62/77 (80%)
 Frame = +1

Query: 1   HGFVYSLERLHKVIETLCDSRLVFEAKYIVLKLKQWIKPNGVTYKYLIIGFCEIGDLIEA 180
           +G+ YS+ERL+KV+E +C  +LV EAK++V K+K  IK +GV+YK+LI GFCE GDLIEA
Sbjct: 167 NGYGYSVERLNKVVEEMCKVKLVEEAKFVVFKMKDLIKLDGVSYKWLISGFCEKGDLIEA 226

Query: 181 SVFWNLLVDEGFELDID 231
           S  WNL+VDEGF  D+D
Sbjct: 227 SKIWNLMVDEGFVPDVD 243


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