BLASTX nr result

ID: Cimicifuga21_contig00026576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026576
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67019.1| hypothetical protein VITISV_027707 [Vitis vinifera]   144   3e-32
ref|XP_002277578.1| PREDICTED: uncharacterized GPI-anchored prot...   143   3e-32
ref|XP_002303794.1| predicted protein [Populus trichocarpa] gi|2...   137   2e-30
ref|NP_174116.1| glycosylphosphatidylinositol-anchored lipid pro...   135   7e-30
ref|NP_001235727.1| uncharacterized protein LOC100305718 precurs...   135   7e-30

>emb|CAN67019.1| hypothetical protein VITISV_027707 [Vitis vinifera]
          Length = 201

 Score =  144 bits (362), Expect = 3e-32
 Identities = 68/137 (49%), Positives = 94/137 (68%), Gaps = 3/137 (2%)
 Frame = +3

Query: 126 APSMQQQCNNDFPKVGICINYASGKADMPSKECCSTVKEIRERNPVCLCYLVQLTHKGES 305
           A S+  QC N+F KV  C+++A+GKA  P+K+CCS V EIR+  PVCLCY +Q TH G  
Sbjct: 32  AASLADQCANEFTKVSECLSFATGKAATPTKDCCSAVSEIRQSKPVCLCYFIQQTHNGSE 91

Query: 306 TLKQLGIQEAKLVQIPSVCKMVNTSITMCTELLNISPSSPDYAIFTNTS---LPVESSPT 476
            +K LGIQEAKL+Q+PS CK+ N S++ C +LLNIS SSPDY+IFT+ S    P  +S  
Sbjct: 92  QVKSLGIQEAKLLQLPSDCKLANASLSDCPKLLNISASSPDYSIFTSNSTSTAPASTSTG 151

Query: 477 KATPMEEKDSTGLLRAP 527
            ++  ++ +S   + AP
Sbjct: 152 TSSGAKDDESNADMYAP 168


>ref|XP_002277578.1| PREDICTED: uncharacterized GPI-anchored protein At1g27950 [Vitis
           vinifera]
          Length = 201

 Score =  143 bits (361), Expect = 3e-32
 Identities = 68/127 (53%), Positives = 90/127 (70%), Gaps = 1/127 (0%)
 Frame = +3

Query: 126 APSMQQQCNNDFPKVGICINYASGKADMPSKECCSTVKEIRERNPVCLCYLVQLTHKGES 305
           A S+  QC N+F KV  C+++A+GKA  P+K+CCS V EIRE  PVCLCY +Q TH G +
Sbjct: 32  AASLADQCANEFTKVSECLSFATGKAATPTKDCCSAVSEIRESKPVCLCYFIQQTHNGSA 91

Query: 306 TLKQLGIQEAKLVQIPSVCKMVNTSITMCTELLNISPSSPDYAIFT-NTSLPVESSPTKA 482
            +K LGIQEAKL+Q+PS CK+ N S++ C +LLNIS SSPDY+IFT N++    +S +  
Sbjct: 92  EVKSLGIQEAKLLQLPSDCKLANASLSDCPKLLNISASSPDYSIFTSNSTSTAPASTSTG 151

Query: 483 TPMEEKD 503
           T    KD
Sbjct: 152 TSSGAKD 158


>ref|XP_002303794.1| predicted protein [Populus trichocarpa] gi|222841226|gb|EEE78773.1|
           predicted protein [Populus trichocarpa]
          Length = 191

 Score =  137 bits (345), Expect = 2e-30
 Identities = 64/134 (47%), Positives = 96/134 (71%), Gaps = 4/134 (2%)
 Frame = +3

Query: 141 QQCNNDFPKVGICINYASGKADMPSKECCSTVKEIRERNPVCLCYLVQLTHKGESTLKQL 320
           ++C++DF K+  C++YASGKA+ P+K+CC +V+ I+E +P CLC+++Q T  G + +K L
Sbjct: 32  EECSSDFQKLMGCLSYASGKANTPTKDCCLSVQNIKESDPKCLCFIMQQTSNGSAPIKNL 91

Query: 321 GIQEAKLVQIPSVCKMVNTSITMCTELLNISPSSPDYAIFTN---TSLPVESSPTKATPM 491
           GIQEAKL+Q+P+ C++ N S++ C +LL ISPSSPD AIFTN   T+ P  S+ T  +  
Sbjct: 92  GIQEAKLLQLPTACQLQNASLSFCPKLLGISPSSPDAAIFTNASTTATPAASTSTGTSQS 151

Query: 492 EEK-DSTGLLRAPH 530
           E+  DS+G    PH
Sbjct: 152 EKAGDSSGFQHRPH 165


>ref|NP_174116.1| glycosylphosphatidylinositol-anchored lipid protein transfer 1
           [Arabidopsis thaliana]
           gi|38258836|sp|Q9C7F7.1|UGPI5_ARATH RecName:
           Full=Uncharacterized GPI-anchored protein At1g27950;
           Flags: Precursor gi|12322995|gb|AAG51485.1|AC069471_16
           lipid transfer protein, putative [Arabidopsis thaliana]
           gi|20260114|gb|AAM12955.1| lipid transfer protein,
           putative [Arabidopsis thaliana]
           gi|22136068|gb|AAM91112.1| lipid transfer protein,
           putative [Arabidopsis thaliana]
           gi|332192773|gb|AEE30894.1|
           glycosylphosphatidylinositol-anchored lipid protein
           transfer 1 [Arabidopsis thaliana]
          Length = 193

 Score =  135 bits (341), Expect = 7e-30
 Identities = 59/126 (46%), Positives = 87/126 (69%)
 Frame = +3

Query: 132 SMQQQCNNDFPKVGICINYASGKADMPSKECCSTVKEIRERNPVCLCYLVQLTHKGESTL 311
           ++  +CN DF KV +C+++A+GKA +PSK+CC  V++I+ER+P CLC+++Q    G   L
Sbjct: 30  ALADECNQDFQKVTLCLDFATGKATIPSKKCCDAVEDIKERDPKCLCFVIQQAKTGGQAL 89

Query: 312 KQLGIQEAKLVQIPSVCKMVNTSITMCTELLNISPSSPDYAIFTNTSLPVESSPTKATPM 491
           K LG+QE KL+Q+P+ C++ N SIT C +LL ISPSSPD A+FTN +     +P   +P 
Sbjct: 90  KDLGVQEDKLIQLPTSCQLHNASITNCPKLLGISPSSPDAAVFTNNATTTPVAPAGKSPA 149

Query: 492 EEKDST 509
               ST
Sbjct: 150 TPATST 155


>ref|NP_001235727.1| uncharacterized protein LOC100305718 precursor [Glycine max]
           gi|255626405|gb|ACU13547.1| unknown [Glycine max]
          Length = 193

 Score =  135 bits (341), Expect = 7e-30
 Identities = 69/140 (49%), Positives = 89/140 (63%), Gaps = 6/140 (4%)
 Frame = +3

Query: 126 APSMQQQCNNDFPKVGICINYASGKADMPSKECCSTVKEIRERNPVCLCYLVQLTHKGES 305
           A  +  +C+    KV  C+N+A+GK +MP KECC     I+E NP CLCY++Q THKG  
Sbjct: 26  ADDLATKCSAVIQKVIPCLNFATGKEEMPKKECCDAATAIKESNPECLCYIIQETHKGSP 85

Query: 306 TLKQLGIQEAKLVQIPSVCKMVNTSITMCTELLNISPSSPDYAIFT-NTSLPVESSPT-- 476
            +K LGIQEAKL+Q+PSVC + N SIT C +LL +SPSSPD AIFT N+S    S+PT  
Sbjct: 86  QVKSLGIQEAKLLQLPSVCNVKNASITNCPKLLGLSPSSPDAAIFTSNSSKTTPSAPTTT 145

Query: 477 ---KATPMEEKDSTGLLRAP 527
                TP  +  S G +  P
Sbjct: 146 NSQTTTPQSQNASHGSMVQP 165


Top