BLASTX nr result

ID: Cimicifuga21_contig00026570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026570
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003619845.1| hypothetical protein MTR_6g069810 [Medicago ...    57   2e-06
gb|EEE65370.1| hypothetical protein OsJ_20664 [Oryza sativa Japo...    57   2e-06
gb|EEC80265.1| hypothetical protein OsI_22233 [Oryza sativa Indi...    57   2e-06
ref|XP_002455812.1| hypothetical protein SORBIDRAFT_03g025653 [S...    56   3e-06
ref|NP_001061974.2| Os08g0459400 [Oryza sativa Japonica Group] g...    56   3e-06

>ref|XP_003619845.1| hypothetical protein MTR_6g069810 [Medicago truncatula]
           gi|355494860|gb|AES76063.1| hypothetical protein
           MTR_6g069810 [Medicago truncatula]
          Length = 390

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
 Frame = -1

Query: 209 CHDMLRKNRVVFHRLCGRLIENGL*-PSRRVDVEEQVAIFLLIVGHKTRIRHGAFDVIR- 36
           C +  R ++VVF++LC  L   GL   + R+ +EEQ+AIFL I+GH  RIR G  ++   
Sbjct: 39  CLENFRMDKVVFYKLCDILETKGLLRDTNRIKIEEQLAIFLFIIGHNLRIR-GVQELFHY 97

Query: 35  SSETVHRHFHN 3
           S ET+ RHF+N
Sbjct: 98  SGETISRHFNN 108


>gb|EEE65370.1| hypothetical protein OsJ_20664 [Oryza sativa Japonica Group]
          Length = 372

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = -1

Query: 212 NCHDMLRKNRVVFHRLCGRLIENGL*PSR-RVDVEEQVAIFLLIVGHKTRIRHGAFDVIR 36
           +C   LR  +VVFH+LC  L    L      V +EEQVA+F+ +VGH    R  AF+ +R
Sbjct: 41  HCISELRMRKVVFHKLCAELRSRALLEETFHVTIEEQVAMFIHVVGHNWSNRPIAFEFMR 100

Query: 35  SSETVHRHFH 6
           S ETV R+F+
Sbjct: 101 SGETVSRYFN 110


>gb|EEC80265.1| hypothetical protein OsI_22233 [Oryza sativa Indica Group]
          Length = 263

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = -1

Query: 212 NCHDMLRKNRVVFHRLCGRLIENGL*PSR-RVDVEEQVAIFLLIVGHKTRIRHGAFDVIR 36
           +C   LR  +VVFH+LC  L    L      V +EEQVA+F+ +VGH    R  AF+ +R
Sbjct: 22  HCISELRMRKVVFHKLCAELRSRALLEETFHVTIEEQVAMFIHVVGHNWSNRPIAFEFMR 81

Query: 35  SSETVHRHFH 6
           S ETV R+F+
Sbjct: 82  SGETVSRYFN 91


>ref|XP_002455812.1| hypothetical protein SORBIDRAFT_03g025653 [Sorghum bicolor]
           gi|241927787|gb|EES00932.1| hypothetical protein
           SORBIDRAFT_03g025653 [Sorghum bicolor]
          Length = 166

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 34/69 (49%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
 Frame = -1

Query: 209 CHDMLRKNRVVFHRLCGRLIENGL*PSRR-VDVEEQVAIFLLIVGHKTRIRHGAFDVIRS 33
           C  MLR  R  F  LC  L    L   R  V VEEQVA+FL +VGH  R R       RS
Sbjct: 62  CISMLRMRRAPFFALCDLLRHRQLVTDREGVFVEEQVAMFLHVVGHNQRFRVVIHSFRRS 121

Query: 32  SETVHRHFH 6
            ETVH+HFH
Sbjct: 122 IETVHKHFH 130


>ref|NP_001061974.2| Os08g0459400 [Oryza sativa Japonica Group]
           gi|255678502|dbj|BAF23888.2| Os08g0459400 [Oryza sativa
           Japonica Group]
          Length = 705

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
 Frame = -1

Query: 209 CHDMLRKNRVVFHRLCGRLIENGL*-PSRRVDVEEQVAIFLLIVGHKTRIRHGAFDVIRS 33
           C   LR  + VF +L  +L +NGL   +  V VEEQ+A+FL  VGH  R R   F VIRS
Sbjct: 100 CISQLRMRKEVFWKLASKLRDNGLLCDTIHVSVEEQLAMFLHTVGHNLRNRVIGFYVIRS 159

Query: 32  SETVHRHFH 6
           SETV R+F+
Sbjct: 160 SETVSRYFN 168


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