BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026560
         (742 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containi...   366   2e-99
ref|NP_198814.1| pentatricopeptide repeat-containing protein [Ar...   349   3e-94
ref|XP_002870737.1| pentatricopeptide repeat-containing protein ...   344   1e-92
ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containi...   340   2e-91
ref|XP_002517447.1| pentatricopeptide repeat-containing protein,...   340   2e-91

>ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic [Vitis vinifera]
           gi|296087770|emb|CBI35026.3| unnamed protein product
           [Vitis vinifera]
          Length = 675

 Score =  366 bits (940), Expect = 2e-99
 Identities = 185/231 (80%), Positives = 209/231 (90%)
 Frame = +1

Query: 49  HQHRRQSQVYLDHSVDMDDLMSSISQTSTQQELYSLMSPYKDRQLSLRFIVSLLSRESDW 228
           H+ R+Q  V+LDHSVDMD+L++SISQTS +QELYSLMSPYK RQLS+RF+VSLLSRE DW
Sbjct: 76  HRPRKQRVVHLDHSVDMDELLASISQTSNEQELYSLMSPYKGRQLSIRFMVSLLSREPDW 135

Query: 229 QRTVALLDWMIEEASYAPSVFAYNVTIRNVLRAKQWDLATGLVEEMRKRAISPDRFTYST 408
           QR++ALLDW+ EEASY+PSVFAYNV IRNVLRAKQW+LA GL EEMR+RA++PDR+TYST
Sbjct: 136 QRSLALLDWINEEASYSPSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYST 195

Query: 409 LITQFGKEGLFDSALSWLQHMEQDRISGDLVLYSNLIELSRKLHDYSKAISIFSRLKNSG 588
           LIT FGKEG+FDSALSWLQ MEQDR+SGDLVLYSNLIELSRKL DYSKAISIFSRLK SG
Sbjct: 196 LITHFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSG 255

Query: 589 ITPDLVAYNSMINVFGKAKLFREAKQLLFEMREAGVVPYTVSYFRLLSTFV 741
           I+PDLVAYNSMINVFGKAKLFREA+ LL EMR  GV+P TVSY  LLS +V
Sbjct: 256 ISPDLVAYNSMINVFGKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYV 306



 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 49/181 (27%), Positives = 96/181 (53%)
 Frame = +1

Query: 196 IVSLLSRESDWQRTVALLDWMIEEASYAPSVFAYNVTIRNVLRAKQWDLATGLVEEMRKR 375
           ++ L  +  D+ + +++    ++ +  +P + AYN  I    +AK +  A  L+ EMR  
Sbjct: 231 LIELSRKLCDYSKAISIFS-RLKRSGISPDLVAYNSMINVFGKAKLFREARLLLPEMRAG 289

Query: 376 AISPDRFTYSTLITQFGKEGLFDSALSWLQHMEQDRISGDLVLYSNLIELSRKLHDYSKA 555
            + PD  +YSTL++ + + G +  ALS    M + R   DL   + +I++  +L    +A
Sbjct: 290 GVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPLDLTTCNVMIDVYGQLDMAKEA 349

Query: 556 ISIFSRLKNSGITPDLVAYNSMINVFGKAKLFREAKQLLFEMREAGVVPYTVSYFRLLST 735
             +F  ++  GI P +V+YN+++ V+G+A+LF EA  L   M+   +    V+Y  ++  
Sbjct: 350 DRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKI 409

Query: 736 F 738
           +
Sbjct: 410 Y 410



 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 45/160 (28%), Positives = 80/160 (50%)
 Frame = +1

Query: 223 DWQRTVALLDWMIEEASYAPSVFAYNVTIRNVLRAKQWDLATGLVEEMRKRAISPDRFTY 402
           D  +    L W + +    P + +YN  +R    A+ +  A  L   M+++ I  +  TY
Sbjct: 344 DMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 403

Query: 403 STLITQFGKEGLFDSALSWLQHMEQDRISGDLVLYSNLIELSRKLHDYSKAISIFSRLKN 582
           +T+I  +GK    + A + +Q M+   I  + + YS +I +  K     +A  +F +L++
Sbjct: 404 NTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRS 463

Query: 583 SGITPDLVAYNSMINVFGKAKLFREAKQLLFEMREAGVVP 702
           SGI  D V Y +MI  + +A L   AK+LL E++    +P
Sbjct: 464 SGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIP 503



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 36/132 (27%), Positives = 72/132 (54%)
 Frame = +1

Query: 343 ATGLVEEMRKRAISPDRFTYSTLITQFGKEGLFDSALSWLQHMEQDRISGDLVLYSNLIE 522
           A  L   MRK  I P   +Y+TL+  +G+  LF  A+   + M++  I  ++V Y+ +I+
Sbjct: 349 ADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 408

Query: 523 LSRKLHDYSKAISIFSRLKNSGITPDLVAYNSMINVFGKAKLFREAKQLLFEMREAGVVP 702
           +  K  ++ KA ++   ++N GI P+ + Y+++I+++ KA     A  L  ++R +G+  
Sbjct: 409 IYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGIEI 468

Query: 703 YTVSYFRLLSTF 738
             V Y  ++  +
Sbjct: 469 DQVLYQTMIVAY 480


>ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g39980, chloroplastic; Flags: Precursor
           gi|10176990|dbj|BAB10222.1| unnamed protein product
           [Arabidopsis thaliana] gi|332007115|gb|AED94498.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 678

 Score =  349 bits (896), Expect = 3e-94
 Identities = 174/231 (75%), Positives = 206/231 (89%), Gaps = 1/231 (0%)
 Frame = +1

Query: 52  QHRR-QSQVYLDHSVDMDDLMSSISQTSTQQELYSLMSPYKDRQLSLRFIVSLLSRESDW 228
           +HRR Q   +LDH+VDMD+L++SI QT  ++EL+SL+S YKDRQLS+RF+VSLLSRE+DW
Sbjct: 76  KHRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLSTYKDRQLSIRFMVSLLSRENDW 135

Query: 229 QRTVALLDWMIEEASYAPSVFAYNVTIRNVLRAKQWDLATGLVEEMRKRAISPDRFTYST 408
           QR++ALLDW+ EEA Y PSVFAYNV +RNVLRAKQ+D+A GL +EMR+RA++PDR+TYST
Sbjct: 136 QRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYST 195

Query: 409 LITQFGKEGLFDSALSWLQHMEQDRISGDLVLYSNLIELSRKLHDYSKAISIFSRLKNSG 588
           LIT FGKEG+FDSALSWLQ MEQDR+SGDLVLYSNLIELSR+L DYSKAISIFSRLK SG
Sbjct: 196 LITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSG 255

Query: 589 ITPDLVAYNSMINVFGKAKLFREAKQLLFEMREAGVVPYTVSYFRLLSTFV 741
           ITPDLVAYNSMINV+GKAKLFREA+ L+ EM EAGV+P TVSY  LLS +V
Sbjct: 256 ITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYV 306



 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 47/181 (25%), Positives = 96/181 (53%)
 Frame = +1

Query: 196 IVSLLSRESDWQRTVALLDWMIEEASYAPSVFAYNVTIRNVLRAKQWDLATGLVEEMRKR 375
           ++ L  R  D+ + +++    ++ +   P + AYN  I    +AK +  A  L++EM + 
Sbjct: 231 LIELSRRLCDYSKAISIFS-RLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEA 289

Query: 376 AISPDRFTYSTLITQFGKEGLFDSALSWLQHMEQDRISGDLVLYSNLIELSRKLHDYSKA 555
            + P+  +YSTL++ + +   F  ALS    M++   + DL   + +I++  +L    +A
Sbjct: 290 GVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEA 349

Query: 556 ISIFSRLKNSGITPDLVAYNSMINVFGKAKLFREAKQLLFEMREAGVVPYTVSYFRLLST 735
             +F  L+   I P++V+YN+++ V+G+A+LF EA  L   M+   +    V+Y  ++  
Sbjct: 350 DRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKI 409

Query: 736 F 738
           +
Sbjct: 410 Y 410



 Score = 75.9 bits (185), Expect = 8e-12
 Identities = 53/212 (25%), Positives = 101/212 (47%), Gaps = 4/212 (1%)
 Frame = +1

Query: 79  LDHSVDMDDLMSSISQTSTQQELYSLMSPYKDRQLSLRF----IVSLLSRESDWQRTVAL 246
           L ++V    L+S   +     E  S+ +  K+   +L      I+  +  + D  +    
Sbjct: 292 LPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADR 351

Query: 247 LDWMIEEASYAPSVFAYNVTIRNVLRAKQWDLATGLVEEMRKRAISPDRFTYSTLITQFG 426
           L W + +    P+V +YN  +R    A+ +  A  L   M+++ I  +  TY+T+I  +G
Sbjct: 352 LFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 411

Query: 427 KEGLFDSALSWLQHMEQDRISGDLVLYSNLIELSRKLHDYSKAISIFSRLKNSGITPDLV 606
           K    + A + +Q M+   I  + + YS +I +  K     +A ++F +L++SG+  D V
Sbjct: 412 KTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQV 471

Query: 607 AYNSMINVFGKAKLFREAKQLLFEMREAGVVP 702
            Y +MI  + +  L   AK+LL E++    +P
Sbjct: 472 LYQTMIVAYERVGLMGHAKRLLHELKLPDNIP 503



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 35/132 (26%), Positives = 74/132 (56%)
 Frame = +1

Query: 343 ATGLVEEMRKRAISPDRFTYSTLITQFGKEGLFDSALSWLQHMEQDRISGDLVLYSNLIE 522
           A  L   +RK  I P+  +Y+T++  +G+  LF  A+   + M++  I  ++V Y+ +I+
Sbjct: 349 ADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 408

Query: 523 LSRKLHDYSKAISIFSRLKNSGITPDLVAYNSMINVFGKAKLFREAKQLLFEMREAGVVP 702
           +  K  ++ KA ++   +++ GI P+ + Y+++I+++GKA     A  L  ++R +GV  
Sbjct: 409 IYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEI 468

Query: 703 YTVSYFRLLSTF 738
             V Y  ++  +
Sbjct: 469 DQVLYQTMIVAY 480


>ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297316573|gb|EFH46996.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 680

 Score =  344 bits (883), Expect = 1e-92
 Identities = 172/231 (74%), Positives = 204/231 (88%), Gaps = 1/231 (0%)
 Frame = +1

Query: 52  QHRR-QSQVYLDHSVDMDDLMSSISQTSTQQELYSLMSPYKDRQLSLRFIVSLLSRESDW 228
           +HRR Q   +LDH+VDMD+L++SI QT  ++EL+SL+S YKDRQLS+RF+VSLLSRE+DW
Sbjct: 78  KHRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLSTYKDRQLSIRFMVSLLSRENDW 137

Query: 229 QRTVALLDWMIEEASYAPSVFAYNVTIRNVLRAKQWDLATGLVEEMRKRAISPDRFTYST 408
           QR++ALLDW+ EEA Y PSVFAYNV +RNVLRAKQ+ +A GL +EMR+RA++PDR+TYST
Sbjct: 138 QRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFGIAHGLFDEMRQRALAPDRYTYST 197

Query: 409 LITQFGKEGLFDSALSWLQHMEQDRISGDLVLYSNLIELSRKLHDYSKAISIFSRLKNSG 588
           LIT FGKEG+FDSALSWLQ MEQDR+SGDLVLYSNLIELSR+L DYSKAISIFSRLK SG
Sbjct: 198 LITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSG 257

Query: 589 ITPDLVAYNSMINVFGKAKLFREAKQLLFEMREAGVVPYTVSYFRLLSTFV 741
           ITPDLVAYNSMINV+GKAKLF+EA+ L+ EM EAGV P TVSY  LLS +V
Sbjct: 258 ITPDLVAYNSMINVYGKAKLFKEARVLIKEMNEAGVSPNTVSYSTLLSVYV 308



 Score = 79.7 bits (195), Expect = 6e-13
 Identities = 48/181 (26%), Positives = 96/181 (53%)
 Frame = +1

Query: 196 IVSLLSRESDWQRTVALLDWMIEEASYAPSVFAYNVTIRNVLRAKQWDLATGLVEEMRKR 375
           ++ L  R  D+ + +++    ++ +   P + AYN  I    +AK +  A  L++EM + 
Sbjct: 233 LIELSRRLCDYSKAISIFS-RLKRSGITPDLVAYNSMINVYGKAKLFKEARVLIKEMNEA 291

Query: 376 AISPDRFTYSTLITQFGKEGLFDSALSWLQHMEQDRISGDLVLYSNLIELSRKLHDYSKA 555
            +SP+  +YSTL++ + +   F  ALS    M++     DL   + +I++  +L    +A
Sbjct: 292 GVSPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEA 351

Query: 556 ISIFSRLKNSGITPDLVAYNSMINVFGKAKLFREAKQLLFEMREAGVVPYTVSYFRLLST 735
             +F  L+   I P++V+YN+++ V+G+A+LF EA  L   M+   +    V+Y  ++  
Sbjct: 352 DRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKI 411

Query: 736 F 738
           +
Sbjct: 412 Y 412



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 43/152 (28%), Positives = 79/152 (51%)
 Frame = +1

Query: 247 LDWMIEEASYAPSVFAYNVTIRNVLRAKQWDLATGLVEEMRKRAISPDRFTYSTLITQFG 426
           L W + +    P+V +YN  +R    A+ +  A  L   M+++ I  +  TY+T+I  +G
Sbjct: 354 LFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 413

Query: 427 KEGLFDSALSWLQHMEQDRISGDLVLYSNLIELSRKLHDYSKAISIFSRLKNSGITPDLV 606
           K    + A + +Q M+   I  + + YS +I +  K     +A ++F +L++SG+  D V
Sbjct: 414 KTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQV 473

Query: 607 AYNSMINVFGKAKLFREAKQLLFEMREAGVVP 702
            Y +MI  + +  L   AK+LL E++    +P
Sbjct: 474 LYQTMIVAYERVGLMGHAKRLLHELKLPDNIP 505



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 35/132 (26%), Positives = 74/132 (56%)
 Frame = +1

Query: 343 ATGLVEEMRKRAISPDRFTYSTLITQFGKEGLFDSALSWLQHMEQDRISGDLVLYSNLIE 522
           A  L   +RK  I P+  +Y+T++  +G+  LF  A+   + M++  I  ++V Y+ +I+
Sbjct: 351 ADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 410

Query: 523 LSRKLHDYSKAISIFSRLKNSGITPDLVAYNSMINVFGKAKLFREAKQLLFEMREAGVVP 702
           +  K  ++ KA ++   +++ GI P+ + Y+++I+++GKA     A  L  ++R +GV  
Sbjct: 411 IYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEI 470

Query: 703 YTVSYFRLLSTF 738
             V Y  ++  +
Sbjct: 471 DQVLYQTMIVAY 482


>ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Cucumis sativus]
           gi|449530101|ref|XP_004172035.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Cucumis sativus]
          Length = 680

 Score =  340 bits (872), Expect = 2e-91
 Identities = 168/228 (73%), Positives = 200/228 (87%)
 Frame = +1

Query: 58  RRQSQVYLDHSVDMDDLMSSISQTSTQQELYSLMSPYKDRQLSLRFIVSLLSRESDWQRT 237
           R +   +LDHS+DMD+L++SI QT  +QELYS++SPYK R+LS+RF+VSLLSRESDWQR+
Sbjct: 83  RPRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYKGRELSMRFMVSLLSRESDWQRS 142

Query: 238 VALLDWMIEEASYAPSVFAYNVTIRNVLRAKQWDLATGLVEEMRKRAISPDRFTYSTLIT 417
           +A+LDW+ EEA Y PSV+AYNV +RNVLRAKQW+LA GL +EMR+RA++ DR+TYSTLIT
Sbjct: 143 LAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLIT 202

Query: 418 QFGKEGLFDSALSWLQHMEQDRISGDLVLYSNLIELSRKLHDYSKAISIFSRLKNSGITP 597
            FGKEG+FD+ALSWLQ MEQDR+SGDLVLYSNLIELSRKL DYSKAISIFSRLK SGITP
Sbjct: 203 YFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITP 262

Query: 598 DLVAYNSMINVFGKAKLFREAKQLLFEMREAGVVPYTVSYFRLLSTFV 741
           D+VAYN+MINVFGKAKLFREA+ LL EMR   V+P TVSY  LL+ FV
Sbjct: 263 DIVAYNTMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFV 310



 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 50/181 (27%), Positives = 97/181 (53%)
 Frame = +1

Query: 196 IVSLLSRESDWQRTVALLDWMIEEASYAPSVFAYNVTIRNVLRAKQWDLATGLVEEMRKR 375
           ++ L  +  D+ + +++    ++ +   P + AYN  I    +AK +  A  L++EMR  
Sbjct: 235 LIELSRKLCDYSKAISIFS-RLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAV 293

Query: 376 AISPDRFTYSTLITQFGKEGLFDSALSWLQHMEQDRISGDLVLYSNLIELSRKLHDYSKA 555
            + PD  +YSTL+  F +   F  ALS +  M++     DL   + +I++  +L    +A
Sbjct: 294 DVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEA 353

Query: 556 ISIFSRLKNSGITPDLVAYNSMINVFGKAKLFREAKQLLFEMREAGVVPYTVSYFRLLST 735
             +F R++  GI P++V+YN+++ V+G+A+LF EA  L   M+   +    V+Y  ++  
Sbjct: 354 DRLFWRMRKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKI 413

Query: 736 F 738
           +
Sbjct: 414 Y 414



 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 45/156 (28%), Positives = 82/156 (52%)
 Frame = +1

Query: 247 LDWMIEEASYAPSVFAYNVTIRNVLRAKQWDLATGLVEEMRKRAISPDRFTYSTLITQFG 426
           L W + +    P+V +YN  +R    A+ +  A  L   M+++ I  +  TY+T+I  +G
Sbjct: 356 LFWRMRKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYG 415

Query: 427 KEGLFDSALSWLQHMEQDRISGDLVLYSNLIELSRKLHDYSKAISIFSRLKNSGITPDLV 606
           K    + A + +Q M++  I  + + YS +I +  K     ++  +F +L++SG   D V
Sbjct: 416 KTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSGAEIDQV 475

Query: 607 AYNSMINVFGKAKLFREAKQLLFEMREAGVVPYTVS 714
            Y +MI  + KA L   AK+LL E+++   +P T +
Sbjct: 476 LYQTMIVAYEKAGLVGHAKRLLHELKQPDNIPRTTA 511



 Score = 65.9 bits (159), Expect = 9e-09
 Identities = 34/132 (25%), Positives = 72/132 (54%)
 Frame = +1

Query: 343 ATGLVEEMRKRAISPDRFTYSTLITQFGKEGLFDSALSWLQHMEQDRISGDLVLYSNLIE 522
           A  L   MRK  I P+  +Y+T++  +G+  LF  A+   + M++  I  ++V Y+ +I+
Sbjct: 353 ADRLFWRMRKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIK 412

Query: 523 LSRKLHDYSKAISIFSRLKNSGITPDLVAYNSMINVFGKAKLFREAKQLLFEMREAGVVP 702
           +  K  ++ KA ++   ++  GI P+ + Y+++I+++GKA     +  L  ++R +G   
Sbjct: 413 IYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSGAEI 472

Query: 703 YTVSYFRLLSTF 738
             V Y  ++  +
Sbjct: 473 DQVLYQTMIVAY 484


>ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543458|gb|EEF44989.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 654

 Score =  340 bits (871), Expect = 2e-91
 Identities = 168/222 (75%), Positives = 195/222 (87%)
 Frame = +1

Query: 76  YLDHSVDMDDLMSSISQTSTQQELYSLMSPYKDRQLSLRFIVSLLSRESDWQRTVALLDW 255
           YLDHSVDM  L+ SISQT  + ELYSL+SPYK+RQLS+RF+VSL+S+E+DWQR++ALLDW
Sbjct: 64  YLDHSVDMKQLLISISQTQNEVELYSLLSPYKERQLSIRFMVSLISQEADWQRSLALLDW 123

Query: 256 MIEEASYAPSVFAYNVTIRNVLRAKQWDLATGLVEEMRKRAISPDRFTYSTLITQFGKEG 435
           + E A Y+PSVFAYNV +RNVLRAK+WDLA GL +EMR+RA+SPDR+TYSTLIT FGK G
Sbjct: 124 INEVARYSPSVFAYNVVLRNVLRAKKWDLAHGLFDEMRQRALSPDRYTYSTLITSFGKAG 183

Query: 436 LFDSALSWLQHMEQDRISGDLVLYSNLIELSRKLHDYSKAISIFSRLKNSGITPDLVAYN 615
           +FD +L WLQ MEQDR+SGDLVLYSNLIELSRKL DYSKAISIF RLK SGITPDLVAYN
Sbjct: 184 MFDESLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGITPDLVAYN 243

Query: 616 SMINVFGKAKLFREAKQLLFEMREAGVVPYTVSYFRLLSTFV 741
           SMINVFGKA+LFREA+ L+ EMRE GV+P TVSY  LLS +V
Sbjct: 244 SMINVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYV 285



 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 49/181 (27%), Positives = 97/181 (53%)
 Frame = +1

Query: 196 IVSLLSRESDWQRTVALLDWMIEEASYAPSVFAYNVTIRNVLRAKQWDLATGLVEEMRKR 375
           ++ L  +  D+ + +++    ++ +   P + AYN  I    +A+ +  A  LV EMR+ 
Sbjct: 210 LIELSRKLCDYSKAISIF-MRLKRSGITPDLVAYNSMINVFGKARLFREARMLVHEMREV 268

Query: 376 AISPDRFTYSTLITQFGKEGLFDSALSWLQHMEQDRISGDLVLYSNLIELSRKLHDYSKA 555
            + PD  +YSTL++ + +   F  ALS    M +   S DL+  + +I++  +L    +A
Sbjct: 269 GVLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEA 328

Query: 556 ISIFSRLKNSGITPDLVAYNSMINVFGKAKLFREAKQLLFEMREAGVVPYTVSYFRLLST 735
             +F  ++  GI P++V+YN+++ V+G+A+LF EA  L   M+   +    V+Y  ++  
Sbjct: 329 DRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 388

Query: 736 F 738
           +
Sbjct: 389 Y 389



 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 52/220 (23%), Positives = 102/220 (46%), Gaps = 4/220 (1%)
 Frame = +1

Query: 55  HRRQSQVYLDHSVDMDDLMSSISQTSTQQELYSLMSPYKDRQLSLRFIVSLLS----RES 222
           H  +    L  +V    L+S   +     E  S+ +   +   SL  +   +      + 
Sbjct: 263 HEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDLMTCNIMIDVYGQL 322

Query: 223 DWQRTVALLDWMIEEASYAPSVFAYNVTIRNVLRAKQWDLATGLVEEMRKRAISPDRFTY 402
           D  +    L W + +    P+V +YN  ++    A+ +  A  L   M+++ I  +  TY
Sbjct: 323 DMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 382

Query: 403 STLITQFGKEGLFDSALSWLQHMEQDRISGDLVLYSNLIELSRKLHDYSKAISIFSRLKN 582
           +T+I  +GK    + A + +Q M++  I  + + YS +I +  K     +A  +F +L++
Sbjct: 383 NTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRS 442

Query: 583 SGITPDLVAYNSMINVFGKAKLFREAKQLLFEMREAGVVP 702
           SG+  D V Y +MI  + +A L   AK+LL +++   ++P
Sbjct: 443 SGVEIDQVLYQTMIVAYERAGLVAHAKRLLHDLKCPDIIP 482



 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 37/132 (28%), Positives = 73/132 (55%)
 Frame = +1

Query: 343 ATGLVEEMRKRAISPDRFTYSTLITQFGKEGLFDSALSWLQHMEQDRISGDLVLYSNLIE 522
           A  L   MRK  I P+  +Y+TL+  +G+  LF  A+   + M++  I  ++V Y+ +I+
Sbjct: 328 ADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 387

Query: 523 LSRKLHDYSKAISIFSRLKNSGITPDLVAYNSMINVFGKAKLFREAKQLLFEMREAGVVP 702
           +  K  ++ KA ++   ++  GI P+ + Y+++I+++GKA     A  L  ++R +GV  
Sbjct: 388 IYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEI 447

Query: 703 YTVSYFRLLSTF 738
             V Y  ++  +
Sbjct: 448 DQVLYQTMIVAY 459