BLASTX nr result

ID: Cimicifuga21_contig00026528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026528
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280803.2| PREDICTED: pentatricopeptide repeat-containi...   273   1e-71
emb|CBI28050.3| unnamed protein product [Vitis vinifera]              273   1e-71
ref|XP_004150383.1| PREDICTED: proteinaceous RNase P 1, chloropl...   270   1e-70
ref|XP_002514281.1| multidrug resistance pump, putative [Ricinus...   264   6e-69
ref|XP_002331163.1| predicted protein [Populus trichocarpa] gi|2...   260   9e-68

>ref|XP_002280803.2| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 816

 Score =  273 bits (697), Expect = 1e-71
 Identities = 125/142 (88%), Positives = 132/142 (92%)
 Frame = +2

Query: 2   YYGPFEAVVDAANVGLFSQRTFSPSKVNAIVNGIRQKLPSKKWPLIVLHNRRITGGKMDE 181
           YYGP+EAVVDAANVGLFSQR F PSKVNAIVNGIRQ LPSKKWPLI+LHN+RITG KMDE
Sbjct: 544 YYGPYEAVVDAANVGLFSQRRFIPSKVNAIVNGIRQMLPSKKWPLIILHNKRITGKKMDE 603

Query: 182 PANKILLEKWKNADALYATPTGSNDDWYWLYAAIKFKCLLVTNDEMRDHIFQLLGNDFFP 361
           PAN+ L+EKWKNADALY TPTGSNDDWYWLYAAIKFKCL+VTNDEMRDHIFQLLGNDFFP
Sbjct: 604 PANRALIEKWKNADALYTTPTGSNDDWYWLYAAIKFKCLIVTNDEMRDHIFQLLGNDFFP 663

Query: 362 RWKERHQVRFSFSDGGPEFTMP 427
           +WKERHQV FSFSD GP F MP
Sbjct: 664 KWKERHQVHFSFSDSGPVFHMP 685


>emb|CBI28050.3| unnamed protein product [Vitis vinifera]
          Length = 751

 Score =  273 bits (697), Expect = 1e-71
 Identities = 125/142 (88%), Positives = 132/142 (92%)
 Frame = +2

Query: 2   YYGPFEAVVDAANVGLFSQRTFSPSKVNAIVNGIRQKLPSKKWPLIVLHNRRITGGKMDE 181
           YYGP+EAVVDAANVGLFSQR F PSKVNAIVNGIRQ LPSKKWPLI+LHN+RITG KMDE
Sbjct: 479 YYGPYEAVVDAANVGLFSQRRFIPSKVNAIVNGIRQMLPSKKWPLIILHNKRITGKKMDE 538

Query: 182 PANKILLEKWKNADALYATPTGSNDDWYWLYAAIKFKCLLVTNDEMRDHIFQLLGNDFFP 361
           PAN+ L+EKWKNADALY TPTGSNDDWYWLYAAIKFKCL+VTNDEMRDHIFQLLGNDFFP
Sbjct: 539 PANRALIEKWKNADALYTTPTGSNDDWYWLYAAIKFKCLIVTNDEMRDHIFQLLGNDFFP 598

Query: 362 RWKERHQVRFSFSDGGPEFTMP 427
           +WKERHQV FSFSD GP F MP
Sbjct: 599 KWKERHQVHFSFSDSGPVFHMP 620


>ref|XP_004150383.1| PREDICTED: proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like [Cucumis sativus]
           gi|449506617|ref|XP_004162799.1| PREDICTED:
           proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 633

 Score =  270 bits (689), Expect = 1e-70
 Identities = 124/142 (87%), Positives = 130/142 (91%)
 Frame = +2

Query: 2   YYGPFEAVVDAANVGLFSQRTFSPSKVNAIVNGIRQKLPSKKWPLIVLHNRRITGGKMDE 181
           YYGPFEAV+DAANVGLFSQR F+PSKVN I NGIRQKLPSKKWPLI+LHNRRITG KM+E
Sbjct: 437 YYGPFEAVIDAANVGLFSQRKFAPSKVNLIANGIRQKLPSKKWPLIILHNRRITGRKMEE 496

Query: 182 PANKILLEKWKNADALYATPTGSNDDWYWLYAAIKFKCLLVTNDEMRDHIFQLLGNDFFP 361
           P NK L+EKWKNADALYATPTGSNDDWYWLYAAIKFKCL+VTNDEMRDH FQLLGNDFFP
Sbjct: 497 PVNKTLIEKWKNADALYATPTGSNDDWYWLYAAIKFKCLIVTNDEMRDHTFQLLGNDFFP 556

Query: 362 RWKERHQVRFSFSDGGPEFTMP 427
           RWKERHQV FSFS  GP F MP
Sbjct: 557 RWKERHQVHFSFSATGPVFHMP 578


>ref|XP_002514281.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223546737|gb|EEF48235.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 745

 Score =  264 bits (674), Expect = 6e-69
 Identities = 120/142 (84%), Positives = 127/142 (89%)
 Frame = +2

Query: 2   YYGPFEAVVDAANVGLFSQRTFSPSKVNAIVNGIRQKLPSKKWPLIVLHNRRITGGKMDE 181
           YYGPFEAVVD ANVGL  Q+ F PSK+NAI NGIRQKLPSKKWPLIVLHNRR+TG KMDE
Sbjct: 474 YYGPFEAVVDGANVGLLGQKRFIPSKINAIANGIRQKLPSKKWPLIVLHNRRVTGHKMDE 533

Query: 182 PANKILLEKWKNADALYATPTGSNDDWYWLYAAIKFKCLLVTNDEMRDHIFQLLGNDFFP 361
           P NK L+EKWK+ADALYATPTGSNDDWYWLYAAIKFKCL+VTNDEMRDH FQLLGNDFFP
Sbjct: 534 PVNKSLVEKWKHADALYATPTGSNDDWYWLYAAIKFKCLIVTNDEMRDHTFQLLGNDFFP 593

Query: 362 RWKERHQVRFSFSDGGPEFTMP 427
           +WKERHQV F FSD GP F MP
Sbjct: 594 KWKERHQVHFGFSDAGPVFHMP 615


>ref|XP_002331163.1| predicted protein [Populus trichocarpa] gi|222873246|gb|EEF10377.1|
           predicted protein [Populus trichocarpa]
          Length = 461

 Score =  260 bits (664), Expect = 9e-68
 Identities = 115/142 (80%), Positives = 126/142 (88%)
 Frame = +2

Query: 2   YYGPFEAVVDAANVGLFSQRTFSPSKVNAIVNGIRQKLPSKKWPLIVLHNRRITGGKMDE 181
           YYGPFEAV+D AN G+++Q  F PSK+NA+VNGIRQKLPSKKWPLIVLHN+RITG KMD 
Sbjct: 301 YYGPFEAVIDGANAGIYNQGRFMPSKINAVVNGIRQKLPSKKWPLIVLHNKRITGRKMDG 360

Query: 182 PANKILLEKWKNADALYATPTGSNDDWYWLYAAIKFKCLLVTNDEMRDHIFQLLGNDFFP 361
           P NK  +EKWKNADALYATPTGSNDDWYWLYAAIKFKCL+VTNDEMRDH F LLGNDFFP
Sbjct: 361 PVNKAFIEKWKNADALYATPTGSNDDWYWLYAAIKFKCLIVTNDEMRDHTFHLLGNDFFP 420

Query: 362 RWKERHQVRFSFSDGGPEFTMP 427
           RWKERHQV F F+D GP+F MP
Sbjct: 421 RWKERHQVHFRFTDAGPDFDMP 442


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