BLASTX nr result

ID: Cimicifuga21_contig00026525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026525
         (1461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002986853.1| hypothetical protein SELMODRAFT_446760 [Sela...   245   2e-62
ref|XP_002969258.1| hypothetical protein SELMODRAFT_410210 [Sela...   243   9e-62
ref|XP_001772375.1| predicted protein [Physcomitrella patens sub...   206   1e-50
gb|ABR16978.1| unknown [Picea sitchensis]                             187   6e-45
ref|XP_001764302.1| predicted protein [Physcomitrella patens sub...   179   1e-42

>ref|XP_002986853.1| hypothetical protein SELMODRAFT_446760 [Selaginella moellendorffii]
            gi|300145507|gb|EFJ12183.1| hypothetical protein
            SELMODRAFT_446760 [Selaginella moellendorffii]
          Length = 369

 Score =  245 bits (626), Expect = 2e-62
 Identities = 139/367 (37%), Positives = 203/367 (55%), Gaps = 10/367 (2%)
 Frame = +2

Query: 71   LPEELTERIFANLPISSVFRCRCVCKQWNKLLTSPSFLQLWNQISPRDLWFLVYHTCRIV 250
            LP EL E+IFA LPI+++ RCR VC  W  +L SP FLQ W +I+    WFL++   +  
Sbjct: 16   LPSELHEKIFALLPIAAITRCRAVCHTWRSILLSPPFLQHWARIAAPIPWFLMFRDHKF- 74

Query: 251  AAYSPRSEKWNNLPLYDRCSLDSSQVLLLASSGGLLCF---RNRNSDYPTLIVCNPVTSS 421
             AYSP    W+++P  +          ++AS+GGLL     + +    P L+VCNP+T S
Sbjct: 75   RAYSPALGTWHDIPAVNPSDHALDLTCIVASAGGLLFLSSQKKKKGSPPLLLVCNPLTKS 134

Query: 422  HRVLPDMPQVRYIDIVGMNCGGDDSYKILVTGTSEPASSESITEIFDSRTGVWEHQCCSN 601
             R+LP + ++  I ++GM   G +SYKILV G +  +S E ITEI+DS +G WE Q  + 
Sbjct: 135  CRILPGLSRITLIYVMGMMESGWNSYKILVAGVASSSSQELITEIYDSASGGWECQSSAR 194

Query: 602  QEFLQFWYEVHAIWHDGFFYCLATPLNTSQGYRLIAYDMEKRVWIALNVKMPFGYIRCP- 778
             +  Q +  + A+W DGFFYCL+ P      Y+L+AYDM KR WI L+       +  P 
Sbjct: 195  LDAFQDFSGMRAVWSDGFFYCLSVP-----PYKLVAYDMGKRSWITLDHAQQLPALAIPN 249

Query: 779  ----SLLICQGKLYLAGKIVEDYLIKSICIWELNMVKLRWVKVVEMPDEVLKKIHSPHSV 946
                SLL+C+G+L +A KI      K + IWE +     W   +   D VL++     S 
Sbjct: 250  LASASLLVCRGRLVMAAKITGAAASKRVRIWEFDAQSCHWKDAIANSDPVLQEFCKCVSY 309

Query: 947  LIQCQGHG--DLMCFSTHRGWQSIIYNFSERTWHWLPENDICGLSKSQAMGRNNLVGLLY 1120
             +  Q     D +CF++   W++++Y+ S++ WHWLPE+  CG  K        L GL Y
Sbjct: 310  FMALQRPRGLDSVCFNSWCRWRTLMYDVSQKKWHWLPEH--CGRFKDM------LSGLTY 361

Query: 1121 EPSLSAR 1141
            EP+  AR
Sbjct: 362  EPTFLAR 368


>ref|XP_002969258.1| hypothetical protein SELMODRAFT_410210 [Selaginella moellendorffii]
            gi|300162734|gb|EFJ29346.1| hypothetical protein
            SELMODRAFT_410210 [Selaginella moellendorffii]
          Length = 369

 Score =  243 bits (620), Expect = 9e-62
 Identities = 139/367 (37%), Positives = 202/367 (55%), Gaps = 10/367 (2%)
 Frame = +2

Query: 71   LPEELTERIFANLPISSVFRCRCVCKQWNKLLTSPSFLQLWNQISPRDLWFLVYHTCRIV 250
            LP EL E+IFA LPI+++ RCR VC  W  +L SP FLQ W +I+    WFL++   +  
Sbjct: 16   LPLELHEKIFALLPIAAITRCRAVCHTWRSILLSPPFLQHWARIAAPIPWFLMFRDHKF- 74

Query: 251  AAYSPRSEKWNNLPLYDRCSLDSSQVLLLASSGGLLCF---RNRNSDYPTLIVCNPVTSS 421
             AYSP    W+++P  +          ++AS+GGLL     + +    P L+VCNP+T S
Sbjct: 75   RAYSPALGTWHDIPAVNPSDHALDLTCIVASAGGLLFLSSQKKKKGSPPLLLVCNPLTKS 134

Query: 422  HRVLPDMPQVRYIDIVGMNCGGDDSYKILVTGTSEPASSESITEIFDSRTGVWEHQCCSN 601
             R+LP + ++  I ++GM   G +SYKILV G +  +S E ITEI+DS +G WE Q  + 
Sbjct: 135  CRILPGLSRITLIYVMGMMESGWNSYKILVAGVASSSSQELITEIYDSASGGWECQSSAR 194

Query: 602  QEFLQFWYEVHAIWHDGFFYCLATPLNTSQGYRLIAYDMEKRVWIALNVKMPFGYIRCP- 778
             +  Q +  + A+W DGFFYCL+ P      Y+L+AYDM KR WI L+       +  P 
Sbjct: 195  LDAFQDFSGMRAVWSDGFFYCLSVP-----PYKLVAYDMGKRSWITLDHAQQLPALAIPN 249

Query: 779  ----SLLICQGKLYLAGKIVEDYLIKSICIWELNMVKLRWVKVVEMPDEVLKKIHSPHSV 946
                SLL+C+G+L +A KI      K + IWE +     W       D VL++     S 
Sbjct: 250  LASASLLVCRGRLVMAAKITGAAASKRVRIWEFDAQSCHWKDATANSDPVLQEFCKCVSY 309

Query: 947  LIQCQGHG--DLMCFSTHRGWQSIIYNFSERTWHWLPENDICGLSKSQAMGRNNLVGLLY 1120
             +  Q     D +CF++   W++++Y+ S++ WHWLPE+  CG  K        L GL Y
Sbjct: 310  FMALQRPRGLDSVCFNSWCRWRTLMYDVSQKKWHWLPEH--CGRFKDM------LSGLTY 361

Query: 1121 EPSLSAR 1141
            EP+  AR
Sbjct: 362  EPTFLAR 368


>ref|XP_001772375.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162676362|gb|EDQ62846.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 462

 Score =  206 bits (524), Expect = 1e-50
 Identities = 128/369 (34%), Positives = 195/369 (52%), Gaps = 10/369 (2%)
 Frame = +2

Query: 62   FSGLPEELTERIFANLPISSVFRCRCVCKQWNKLLTSPSFLQLWNQISPRDLWFLVYHTC 241
            +  LPE+L ER+ A LPI S+FR RCVCKQWN +L S  F+  + Q+SP+  W ++Y   
Sbjct: 72   WKSLPEDLMERVLAWLPIHSLFRMRCVCKQWNSILFSERFVARYTQVSPQKPWIIMYTAG 131

Query: 242  RIVAAYSPRSEKWNNLPLYDRCSLDSSQVLLLASSGGLLCFRNRNSDYPTLIVCNPVTSS 421
            R+ +AY    +KW++L +       S +  +LA+S GLLC+ N    +P L VCNP+T  
Sbjct: 132  RVSSAYDSSLKKWHDLAI----PAMSPEKCVLAASEGLLCYGNEFFPWPNLFVCNPMTKF 187

Query: 422  HRVLPDMPQVRYIDIVGM-NCGGDDSYKILVTGT--SEPASSESITEIFDSRTGVWEHQC 592
             + LP M  ++ I +VGM N     SYKILV G    E  +    TEIF S+T  W    
Sbjct: 188  WQHLPPMRFIKTIHVVGMVNDRASKSYKILVAGLFFDEAHNGRLATEIFCSQTNAWAVGG 247

Query: 593  CSNQEFLQFWY--EVHAIWHDGFFYCLATPLNTSQGYRLIAYDMEKRVWIALNVKMPFGY 766
                     W     +A+W  G FYC+     T   + +IAYD+E+ +W  ++V+MP   
Sbjct: 248  KPWPIMAAAWKLGAGYAVWSMGSFYCI-----TFSPFGVIAYDIERNLWDEVHVRMP-AC 301

Query: 767  IRCPSLLICQGKLYLAGKIVEDYLIKSICIWELNMVKLRWVKVVEMPDEVLKKI-----H 931
            I  PSL+ CQG+L + G   E   +  I IWEL  +K+ WV++  MP ++ ++       
Sbjct: 302  IVSPSLVECQGRLLMVGGCEEGNFL-GIRIWELERIKMVWVEIERMPRKLRREFVEMLRP 360

Query: 932  SPHSVLIQCQGHGDLMCFSTHRGWQSIIYNFSERTWHWLPENDICGLSKSQAMGRNNLVG 1111
            S H       G+G+++C +      + +++  +RTW WLP     G  +   +    L G
Sbjct: 361  SRHFFGF---GNGNIICLTISESSPAAVFDLEDRTWKWLP-----GCPRLPDINNWQLRG 412

Query: 1112 LLYEPSLSA 1138
            + +EP L +
Sbjct: 413  ISFEPQLDS 421


>gb|ABR16978.1| unknown [Picea sitchensis]
          Length = 416

 Score =  187 bits (475), Expect = 6e-45
 Identities = 116/363 (31%), Positives = 187/363 (51%), Gaps = 26/363 (7%)
 Frame = +2

Query: 47   QTIHQFSGLPEELTERIFANLPISSVFRCRCVCKQWNKLLTSPSFLQLWNQISPRDLWFL 226
            + ++ +SGLPE+L +RIF+ LP++S+   RCVCK+WN L+ S  F     ++S    WF+
Sbjct: 38   EEVNLWSGLPEDLMDRIFSCLPLTSILHLRCVCKRWNSLVQSKRFQTALARVSSPRPWFI 97

Query: 227  VYHTCRIVAAYSPRSEKWNNL---PLYDRCSLDSSQVLLLASSGGLLCFRNRNSDYPTLI 397
            +    R    Y P + KW+ +   P   R S+ S  + +LA SG  LC  N+ S+   L 
Sbjct: 98   LCTMGRTSCCYDPSTNKWHIIIRGPNSGR-SILSPCISILAVSGSFLCLGNQVSECKVLS 156

Query: 398  VCNPVTSSHRVLPDMPQVRYIDIVGMNCGGDDS---YKILVTG-------TSEPASSESI 547
            +CNP+T S R LP M QV  I  V M    + +   YKI+V+G        S+P S E +
Sbjct: 157  ICNPITKSQRNLPRMLQVSLIHKVTMITYPESNKKWYKIMVSGESGLPTMRSDPYSYELL 216

Query: 548  TEIFDSRTGVWEHQCCSNQEFLQFWYEVHAIWHDGFFYCLATPLNTSQGYRLIAYDMEKR 727
            TE++DS T  W+  C       +F  +     +D  +YC+     T   Y ++ +D++  
Sbjct: 217  TELYDSSTDSWK-MCGRPLPEAKFGSDPGVWCNDHLYYCI-----TELPYGVVVFDLKTE 270

Query: 728  VWIALNVKMPFGYIRCPSLLICQGKLYLAGKIVE-----------DYLIKSICIWELNMV 874
             W+ L V+MP   +  PSL+ C+G+L + G++             +  I  I IWEL++ 
Sbjct: 271  SWVELRVQMP-SSLSSPSLVECRGRLLMIGRLSNMDQISPAADQTESNIPRIIIWELDVR 329

Query: 875  KLRWVKVVEMPDEVLKKIHSPHSVL--IQCQGHGDLMCFSTHRGWQSIIYNFSERTWHWL 1048
               WV++V +P E+ +    P  +     C G G+ +  +THR    ++Y+  + TW WL
Sbjct: 330  HKEWVEIVRVPTEICRDFSVPLEIYAPFVCSGLGNHIYITTHRNPNVLVYDLWKNTWQWL 389

Query: 1049 PEN 1057
            P +
Sbjct: 390  PSD 392


>ref|XP_001764302.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162684454|gb|EDQ70856.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 648

 Score =  179 bits (455), Expect = 1e-42
 Identities = 121/366 (33%), Positives = 193/366 (52%), Gaps = 8/366 (2%)
 Frame = +2

Query: 71   LPEELTERIFANLPISSVFRCRCVCKQWNKLLTSPSFLQLWNQISPRDLWFLVYHTCRIV 250
            LPEEL ER+   +P+ S+ R RCVCK+WN  +   +F  L  Q+SP+  W ++  T   +
Sbjct: 302  LPEELLERVLLYVPLKSLVRFRCVCKKWNIYVLEDTFTDLREQVSPQRPWIVMTSTRDSM 361

Query: 251  AAYSPRSEKWNNLPLYDRCSLDSSQVLLLASSGGLLCFRNRNSDYPTLIVCNPVTSSHRV 430
             AY      W+++P+      ++  + ++A++GGLLCF N    +P + VCNP+T   R 
Sbjct: 362  FAYDSGLGTWHDVPI----PFNAYSLHVVAAAGGLLCFSNAWFHWPIMFVCNPMTQKWRQ 417

Query: 431  LPDMPQVRYIDIVGMNCGGDD---SYKILVTGTSEPASSESITEIFDSRTGVWEHQCCSN 601
            LP M     I  VGM    DD   ++ +LV G  E      ITE++DS++ VW     S 
Sbjct: 418  LPRM-NTWMISTVGM--AYDDATATFTVLVCGRLE--DHIMITEVYDSKSDVW---TLSG 469

Query: 602  QEFLQFWYEVH-AIWHDGFFYCLATPLNTSQGYRLIAYDMEKRVWIALNVKMPFGYIRCP 778
              F    Y    ++W DG FYCL  P +T     L++YD+ +  W  + ++MP   I  P
Sbjct: 470  TPFSARKYGGDISLWCDGIFYCLTYPFST---LCLLSYDLSQGTWCEVPIRMP-SPIMSP 525

Query: 779  SLLICQGKLYLAGKIVEDYLIKSICIWELNMVKLRWVKVVEMPDEVLKKIHSP--HSVLI 952
            +L+  +G L L G + E  L   I IW+L+ VK  W ++  MP ++ K+  +    S  +
Sbjct: 526  ALVESRGTLLLVGGLEEQELF-GIQIWKLDTVKQEWQELERMPLQLCKEFEAKMVPSKPL 584

Query: 953  QCQGHGDLMCFS--THRGWQSIIYNFSERTWHWLPENDICGLSKSQAMGRNNLVGLLYEP 1126
             C G GD +  S  T+    +++Y+   RTW+W P +D      +  +G+++  G+ +EP
Sbjct: 585  SCFGTGDSIFLSIPTNDYMPALMYDLQRRTWNWWPVSDFPATLPALNIGQSS--GISFEP 642

Query: 1127 SLSARV 1144
             L+A V
Sbjct: 643  RLNAHV 648


Top