BLASTX nr result

ID: Cimicifuga21_contig00025939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025939
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK21982.1| unknown [Picea sitchensis]                             218   1e-54
ref|XP_002324159.1| predicted protein [Populus trichocarpa] gi|2...   216   4e-54
ref|XP_002328430.1| predicted protein [Populus trichocarpa] gi|2...   216   4e-54
ref|XP_002284866.1| PREDICTED: signal peptidase complex subunit ...   216   4e-54
gb|ABK22640.1| unknown [Picea sitchensis]                             213   3e-53

>gb|ABK21982.1| unknown [Picea sitchensis]
          Length = 167

 Score =  218 bits (555), Expect = 1e-54
 Identities = 102/166 (61%), Positives = 122/166 (73%)
 Frame = -3

Query: 676 MHSFGYRFNTILTLGGFLLAVLCTLTSFTDNFNVPSVNSHIEVLKVNRFRKQLNGNDEVT 497
           MHSF YR N + T G  +LA++C + S +DNFN  S  + IEVLK+NRF++Q NGNDEV+
Sbjct: 1   MHSFAYRSNALFTFGVTILAIMCIMVSVSDNFNTASPQAQIEVLKINRFKRQPNGNDEVS 60

Query: 496 LTFNISMDLRPAFTWNTKQVFVFVAAEYQTVKNSLNQVSLWDHIIQEKERAQFQTKAVTK 317
           LT NIS DL+  FTWNTKQVF+FVAAEY+T KN LNQVSLWD II  KE A F   A  K
Sbjct: 61  LTMNISADLQSLFTWNTKQVFIFVAAEYETAKNVLNQVSLWDAIIPSKEHAVFSIPATNK 120

Query: 316 YSFIDQGSNLRGKQVNFVLHWYIMPKVGRTIEDKMVISDFRLPEAY 179
           Y F+DQGSNLRG++ N  +HW++MPK G    DK VIS FRLPE Y
Sbjct: 121 YGFVDQGSNLRGQEFNLTMHWHVMPKTGYMYADKKVISGFRLPEEY 166


>ref|XP_002324159.1| predicted protein [Populus trichocarpa] gi|222865593|gb|EEF02724.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score =  216 bits (550), Expect = 4e-54
 Identities = 98/166 (59%), Positives = 129/166 (77%)
 Frame = -3

Query: 676 MHSFGYRFNTILTLGGFLLAVLCTLTSFTDNFNVPSVNSHIEVLKVNRFRKQLNGNDEVT 497
           MHSFGYR N +LT    +LA++C + SF+DNFN PS ++ I+++K N F+KQ++GNDEV+
Sbjct: 1   MHSFGYRANALLTFALTILALMCAIASFSDNFNFPSPSAQIQIVKFNWFQKQVHGNDEVS 60

Query: 496 LTFNISMDLRPAFTWNTKQVFVFVAAEYQTVKNSLNQVSLWDHIIQEKERAQFQTKAVTK 317
           LT NI+ DL+  FTWNTKQ+F+FVAAEY+T +NSLNQVSLWD II  KE A+F  +   K
Sbjct: 61  LTMNITADLQSLFTWNTKQLFIFVAAEYETPQNSLNQVSLWDAIIPAKEHAKFWIQTANK 120

Query: 316 YSFIDQGSNLRGKQVNFVLHWYIMPKVGRTIEDKMVISDFRLPEAY 179
           Y FIDQGSNLRGK+ N  LHW++MPK G+   DK+V+S FR+PE +
Sbjct: 121 YRFIDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGFRMPEEH 166


>ref|XP_002328430.1| predicted protein [Populus trichocarpa] gi|222838145|gb|EEE76510.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score =  216 bits (550), Expect = 4e-54
 Identities = 99/166 (59%), Positives = 129/166 (77%)
 Frame = -3

Query: 676 MHSFGYRFNTILTLGGFLLAVLCTLTSFTDNFNVPSVNSHIEVLKVNRFRKQLNGNDEVT 497
           MH+FGYR N +LT    +LA++CT+ SF+DNFN PS ++ I+VL  N F+KQ +GNDEV+
Sbjct: 1   MHTFGYRANALLTYALTILALMCTIASFSDNFNFPSPSAEIQVLNFNWFQKQPHGNDEVS 60

Query: 496 LTFNISMDLRPAFTWNTKQVFVFVAAEYQTVKNSLNQVSLWDHIIQEKERAQFQTKAVTK 317
           LT NI+ DL+  FTWNTKQ+F+FVAAEY+T +NS+NQVSLWD II  KE A+F  +   K
Sbjct: 61  LTMNITADLQSLFTWNTKQLFIFVAAEYETPQNSVNQVSLWDAIIPAKEHAKFWFQTANK 120

Query: 316 YSFIDQGSNLRGKQVNFVLHWYIMPKVGRTIEDKMVISDFRLPEAY 179
           Y F+DQGSNLRGK+ N  LHW++MPK G+ + DK+V+S FRLPE Y
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMLADKLVMSGFRLPEEY 166


>ref|XP_002284866.1| PREDICTED: signal peptidase complex subunit 3B [Vitis vinifera]
          Length = 167

 Score =  216 bits (550), Expect = 4e-54
 Identities = 100/166 (60%), Positives = 125/166 (75%)
 Frame = -3

Query: 676 MHSFGYRFNTILTLGGFLLAVLCTLTSFTDNFNVPSVNSHIEVLKVNRFRKQLNGNDEVT 497
           MHSFGYR N++LT    +LAV+C + SF+DN N PS +S +EVL +N F++Q NGNDEV+
Sbjct: 1   MHSFGYRANSLLTFAVTILAVMCAMASFSDNLNTPSPSSQVEVLSINWFQRQPNGNDEVS 60

Query: 496 LTFNISMDLRPAFTWNTKQVFVFVAAEYQTVKNSLNQVSLWDHIIQEKERAQFQTKAVTK 317
           +T NIS +L+  FTWNTKQVFVF+AAEY T KNSLNQVSLWD II  KE A+F      K
Sbjct: 61  MTLNISANLQSMFTWNTKQVFVFLAAEYATPKNSLNQVSLWDGIIPSKEHAKFWIHTTNK 120

Query: 316 YSFIDQGSNLRGKQVNFVLHWYIMPKVGRTIEDKMVISDFRLPEAY 179
           Y F DQGSNLRGK+ N  LHW++MPK G+   DK++++ FRLPE Y
Sbjct: 121 YRFTDQGSNLRGKEFNLTLHWHVMPKTGKMFADKIIMTGFRLPEEY 166


>gb|ABK22640.1| unknown [Picea sitchensis]
          Length = 167

 Score =  213 bits (542), Expect = 3e-53
 Identities = 99/166 (59%), Positives = 121/166 (72%)
 Frame = -3

Query: 676 MHSFGYRFNTILTLGGFLLAVLCTLTSFTDNFNVPSVNSHIEVLKVNRFRKQLNGNDEVT 497
           MHSF YR N + T G  +LA++C + S +DN N PS  + IEVL +N F++Q NGNDEV+
Sbjct: 1   MHSFAYRANALFTFGVTILAIMCVMASLSDNLNTPSPQAEIEVLNINWFQRQPNGNDEVS 60

Query: 496 LTFNISMDLRPAFTWNTKQVFVFVAAEYQTVKNSLNQVSLWDHIIQEKERAQFQTKAVTK 317
           LT NIS DL+  FTWNTKQVF+FVAAEY++ KN+LNQVSLWD II  KE A F      K
Sbjct: 61  LTLNISADLQSLFTWNTKQVFIFVAAEYESEKNALNQVSLWDAIIPSKEHAMFWIHTANK 120

Query: 316 YSFIDQGSNLRGKQVNFVLHWYIMPKVGRTIEDKMVISDFRLPEAY 179
           YSF+DQGSNLRG++ N  +HW++MPK G    DK VIS FRLPE Y
Sbjct: 121 YSFVDQGSNLRGQEFNLTMHWHVMPKTGYMYADKKVISGFRLPEEY 166


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