BLASTX nr result

ID: Cimicifuga21_contig00025876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025876
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284743.1| PREDICTED: thioredoxin-like 4, chloroplastic...   260   1e-67
ref|XP_004150883.1| PREDICTED: thioredoxin-like 4, chloroplastic...   229   4e-58
ref|XP_002510215.1| Thioredoxin, putative [Ricinus communis] gi|...   227   2e-57
ref|XP_002326940.1| predicted protein [Populus trichocarpa] gi|2...   227   2e-57
gb|AFH68081.1| thioredoxin-like protein 3 [Populus tremula x Pop...   224   1e-56

>ref|XP_002284743.1| PREDICTED: thioredoxin-like 4, chloroplastic [Vitis vinifera]
           gi|302142316|emb|CBI19519.3| unnamed protein product
           [Vitis vinifera]
          Length = 216

 Score =  260 bits (665), Expect = 1e-67
 Identities = 136/211 (64%), Positives = 160/211 (75%), Gaps = 5/211 (2%)
 Frame = +1

Query: 34  MQRQMLFSSRGSFNSTKVPDGQRDLEFACVHPNFLPSRNYLRFWPVRSKIPSNILNLRSD 213
           MQRQ +  ++ SFN  K  DG  D    C+ P+ LP R ++R   +R++IPS+I     D
Sbjct: 1   MQRQSVLYNKASFNFGKNSDGF-DTRIPCILPSLLPDRIHVRSCFLRAEIPSSIKIESLD 59

Query: 214 -----AQIRNREIKSVPHNISGELVDEDDDLCPVDCVREFKTDAEFFKILAKAKETDSLV 378
                   R  E++SV +   GEL DEDD+LCPVDCVREFKTD EF +IL KAKET+SLV
Sbjct: 60  FTKIGCTFRQAEVRSVAYENEGELSDEDDELCPVDCVREFKTDEEFSRILEKAKETNSLV 119

Query: 379 VVDFYRTSCGSCKYIAQGFSKLCKGSSNHEAPVIFLKHNVMDEYDEQSEVAERLRIKAVP 558
           VVDFYRTSCGSCKYI QGF+KLCKGS + EA VIFLKHNV+DEYDE+SEVAERLRIKAVP
Sbjct: 120 VVDFYRTSCGSCKYIEQGFAKLCKGSGDEEAAVIFLKHNVIDEYDEESEVAERLRIKAVP 179

Query: 559 LFHFYKNEVLLEAFPTRDKERIVAAIRKYNS 651
           LFHFYK+ VLLE+FPTRDKERI+AAI KY S
Sbjct: 180 LFHFYKDGVLLESFPTRDKERIIAAILKYTS 210


>ref|XP_004150883.1| PREDICTED: thioredoxin-like 4, chloroplastic-like [Cucumis sativus]
           gi|449522608|ref|XP_004168318.1| PREDICTED:
           thioredoxin-like 4, chloroplastic-like [Cucumis sativus]
          Length = 206

 Score =  229 bits (583), Expect = 4e-58
 Identities = 120/189 (63%), Positives = 138/189 (73%), Gaps = 1/189 (0%)
 Frame = +1

Query: 88  PDGQRDLEFACVHPNFLPS-RNYLRFWPVRSKIPSNILNLRSDAQIRNREIKSVPHNISG 264
           P+ + +     + P +L S +  +R    R ++P N L  +S  ++             G
Sbjct: 21  PNEKMEPRIPILIPRWLSSEKEPVRLSITRPEVPRNQLLYKSKMRVNAGN--------QG 72

Query: 265 ELVDEDDDLCPVDCVREFKTDAEFFKILAKAKETDSLVVVDFYRTSCGSCKYIAQGFSKL 444
           EL DEDDDLCPVDCVREFKTD EF KIL KAKE   LVVVDFYRTSCGSCKYI QGF+KL
Sbjct: 73  ELSDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKL 132

Query: 445 CKGSSNHEAPVIFLKHNVMDEYDEQSEVAERLRIKAVPLFHFYKNEVLLEAFPTRDKERI 624
           CKGS + +APVIFLKHNVMDEYDEQSEVAERLRIK VPLFHFYK+ VLLEAFPTRDKERI
Sbjct: 133 CKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERI 192

Query: 625 VAAIRKYNS 651
           + AI KY+S
Sbjct: 193 LTAITKYSS 201


>ref|XP_002510215.1| Thioredoxin, putative [Ricinus communis]
           gi|223550916|gb|EEF52402.1| Thioredoxin, putative
           [Ricinus communis]
          Length = 220

 Score =  227 bits (578), Expect = 2e-57
 Identities = 129/215 (60%), Positives = 147/215 (68%), Gaps = 9/215 (4%)
 Frame = +1

Query: 34  MQRQMLFSSRGSFNSTKVPDGQRDLEFACVHPNFLPSRNYLRFWPVRSK-------IPSN 192
           MQ+Q +  S  SF   K P+ Q       V P     R Y +   +R+K       I  +
Sbjct: 1   MQKQNILHSNASFGFGKSPEEQLGSRIPHVIPRMCLYR-YAKSCLIRAKAVPITKTISLD 59

Query: 193 ILNLRSDAQIRNREIK-SVPHNISGELVDEDD-DLCPVDCVREFKTDAEFFKILAKAKET 366
            L       ++   IK  V     GEL DEDD DLCPVDCV+EFKTD EFFKIL KAKET
Sbjct: 60  FLKNSDAFLLQPARIKLGVTDGNLGELSDEDDEDLCPVDCVKEFKTDEEFFKILEKAKET 119

Query: 367 DSLVVVDFYRTSCGSCKYIAQGFSKLCKGSSNHEAPVIFLKHNVMDEYDEQSEVAERLRI 546
           DSLVVVDFYR SCGSCKYI QGF+KLC+G+ ++EA VIFLKHNV+DEYDEQSEVAERLRI
Sbjct: 120 DSLVVVDFYRPSCGSCKYIEQGFAKLCRGAGDNEASVIFLKHNVIDEYDEQSEVAERLRI 179

Query: 547 KAVPLFHFYKNEVLLEAFPTRDKERIVAAIRKYNS 651
           K VPLFHFYK  VLLEAFPTRDKERI A+I KY+S
Sbjct: 180 KTVPLFHFYKGGVLLEAFPTRDKERITASILKYSS 214


>ref|XP_002326940.1| predicted protein [Populus trichocarpa] gi|222835255|gb|EEE73690.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score =  227 bits (578), Expect = 2e-57
 Identities = 112/149 (75%), Positives = 123/149 (82%)
 Frame = +1

Query: 205 RSDAQIRNREIKSVPHNISGELVDEDDDLCPVDCVREFKTDAEFFKILAKAKETDSLVVV 384
           +++   R   IK+V     GEL DEDDDLCPVDCVREFKTD EF +IL KAKETDSLVVV
Sbjct: 18  KNNVASRPGRIKAVVDENPGELSDEDDDLCPVDCVREFKTDEEFLRILEKAKETDSLVVV 77

Query: 385 DFYRTSCGSCKYIAQGFSKLCKGSSNHEAPVIFLKHNVMDEYDEQSEVAERLRIKAVPLF 564
           DFYRTSCGSCKYI QGF+KLCKGS + EA V FLKHNV+DEYDEQSEVAERLRIK VPLF
Sbjct: 78  DFYRTSCGSCKYIEQGFAKLCKGSGDQEAAVTFLKHNVIDEYDEQSEVAERLRIKTVPLF 137

Query: 565 HFYKNEVLLEAFPTRDKERIVAAIRKYNS 651
           HFYK  VL+E+FPTRDKERI+ AI KY S
Sbjct: 138 HFYKKGVLVESFPTRDKERILGAILKYTS 166


>gb|AFH68081.1| thioredoxin-like protein 3 [Populus tremula x Populus tremuloides]
          Length = 172

 Score =  224 bits (571), Expect = 1e-56
 Identities = 111/143 (77%), Positives = 119/143 (83%)
 Frame = +1

Query: 223 RNREIKSVPHNISGELVDEDDDLCPVDCVREFKTDAEFFKILAKAKETDSLVVVDFYRTS 402
           R   IK+V      EL DEDDDLCPVDCVREFKTD EF +IL KAKETDSLVVVDFYRTS
Sbjct: 24  RPGRIKAVVDENPAELSDEDDDLCPVDCVREFKTDEEFLRILEKAKETDSLVVVDFYRTS 83

Query: 403 CGSCKYIAQGFSKLCKGSSNHEAPVIFLKHNVMDEYDEQSEVAERLRIKAVPLFHFYKNE 582
           CGSCKYI QGF+KLCKGS + EA V FLKHNV+DEYDEQSEVAERLRIK VPLFHFYK  
Sbjct: 84  CGSCKYIEQGFAKLCKGSGDQEAAVTFLKHNVIDEYDEQSEVAERLRIKTVPLFHFYKKG 143

Query: 583 VLLEAFPTRDKERIVAAIRKYNS 651
           VL+E+FPTRDKERI+ AI KY S
Sbjct: 144 VLVESFPTRDKERILGAILKYTS 166


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