BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025815
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283798.1| PREDICTED: nuclear pore complex protein Nup8...    81   6e-26
ref|XP_002516506.1| conserved hypothetical protein [Ricinus comm...    81   1e-24
ref|XP_003550123.1| PREDICTED: nuclear pore complex protein Nup8...    80   2e-22
ref|NP_567908.1| uncharacterized protein [Arabidopsis thaliana] ...    80   6e-22
gb|AAK32793.1|AF361625_1 AT4g32910/F26P21_30 [Arabidopsis thalia...    80   6e-22

>ref|XP_002283798.1| PREDICTED: nuclear pore complex protein Nup85 [Vitis vinifera]
           gi|296081842|emb|CBI20847.3| unnamed protein product
           [Vitis vinifera]
          Length = 715

 Score = 80.9 bits (198), Expect(2) = 6e-26
 Identities = 37/47 (78%), Positives = 42/47 (89%)
 Frame = +3

Query: 213 MQLMRSPSTPQRFWLPLLHDSLMLLNWRECPLLNVAQTNLLLNKLQD 353
           + LMR+PSTPQRFWLPLLHDSL LL+W+E PLLN  QTNLLLNKLQ+
Sbjct: 631 ISLMRNPSTPQRFWLPLLHDSLKLLSWQERPLLNANQTNLLLNKLQE 677



 Score = 61.6 bits (148), Expect(2) = 6e-26
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +2

Query: 359 SIGRLCPDYCEADLPPQALSSVRLALATNLGRAILEE 469
           S+ RL PD+ EA+LPPQALSSVRLALATNLGRAILEE
Sbjct: 679 SMARLRPDFIEANLPPQALSSVRLALATNLGRAILEE 715


>ref|XP_002516506.1| conserved hypothetical protein [Ricinus communis]
           gi|223544326|gb|EEF45847.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 725

 Score = 80.9 bits (198), Expect(2) = 1e-24
 Identities = 37/47 (78%), Positives = 43/47 (91%)
 Frame = +3

Query: 213 MQLMRSPSTPQRFWLPLLHDSLMLLNWRECPLLNVAQTNLLLNKLQD 353
           + LM+SPSTPQRFWLPLL+DSL LL+W E PLLNV+QTNLLLNKLQ+
Sbjct: 640 LSLMKSPSTPQRFWLPLLNDSLKLLSWEERPLLNVSQTNLLLNKLQE 686



 Score = 57.4 bits (137), Expect(2) = 1e-24
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = +2

Query: 359 SIGRLCPDYCEADLPPQALSSVRLALATNLGRAILEE 469
           S+ RL PD  EAD PPQ L+SVRLALATNLGRAILEE
Sbjct: 688 SMARLHPDSVEADFPPQTLNSVRLALATNLGRAILEE 724


>ref|XP_003550123.1| PREDICTED: nuclear pore complex protein Nup85-like [Glycine max]
          Length = 698

 Score = 80.1 bits (196), Expect(2) = 2e-22
 Identities = 34/45 (75%), Positives = 43/45 (95%)
 Frame = +3

Query: 219 LMRSPSTPQRFWLPLLHDSLMLLNWRECPLLNVAQTNLLLNKLQD 353
           LM++PSTPQRFWLPLL+DSL LLNW++CPLL+V++TNLLLNKL +
Sbjct: 616 LMKNPSTPQRFWLPLLYDSLKLLNWQDCPLLSVSETNLLLNKLHE 660



 Score = 50.4 bits (119), Expect(2) = 2e-22
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = +2

Query: 359 SIGRLCPDYCEADLPPQALSSVRLALATNLGRAILEE 469
           S+ +L P + E  LPP ALSS+RLALATNLG+AIL+E
Sbjct: 662 SLAKLRPHHTEPSLPPDALSSIRLALATNLGQAILDE 698


>ref|NP_567908.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75158853|sp|Q8RXH2.1|NUP85_ARATH RecName:
           Full=Nuclear pore complex protein Nup85; AltName:
           Full=Nucleoporin Nup85 gi|19698819|gb|AAL91145.1|
           putative protein [Arabidopsis thaliana]
           gi|332660742|gb|AEE86142.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 716

 Score = 80.1 bits (196), Expect(2) = 6e-22
 Identities = 37/47 (78%), Positives = 41/47 (87%)
 Frame = +3

Query: 213 MQLMRSPSTPQRFWLPLLHDSLMLLNWRECPLLNVAQTNLLLNKLQD 353
           + LM+SPSTPQRFWLPLLHDSL LLNW E  LLNV QTNL+LNKLQ+
Sbjct: 631 VSLMKSPSTPQRFWLPLLHDSLKLLNWPERSLLNVTQTNLMLNKLQE 677



 Score = 48.9 bits (115), Expect(2) = 6e-22
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = +2

Query: 359 SIGRLCPDYCEADLPPQALSSVRLALATNLGRAILEE 469
           SI RL P + E++L  QA+ SVRLALATNLGRA LEE
Sbjct: 679 SIARLRPGFIESELSAQAVGSVRLALATNLGRAFLEE 715


>gb|AAK32793.1|AF361625_1 AT4g32910/F26P21_30 [Arabidopsis thaliana]
           gi|25090220|gb|AAN72255.1| At4g32910/F26P21_30
           [Arabidopsis thaliana]
          Length = 713

 Score = 80.1 bits (196), Expect(2) = 6e-22
 Identities = 37/47 (78%), Positives = 41/47 (87%)
 Frame = +3

Query: 213 MQLMRSPSTPQRFWLPLLHDSLMLLNWRECPLLNVAQTNLLLNKLQD 353
           + LM+SPSTPQRFWLPLLHDSL LLNW E  LLNV QTNL+LNKLQ+
Sbjct: 628 VSLMKSPSTPQRFWLPLLHDSLKLLNWPERSLLNVTQTNLMLNKLQE 674



 Score = 48.9 bits (115), Expect(2) = 6e-22
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = +2

Query: 359 SIGRLCPDYCEADLPPQALSSVRLALATNLGRAILEE 469
           SI RL P + E++L  QA+ SVRLALATNLGRA LEE
Sbjct: 676 SIARLRPGFIESELSAQAVGSVRLALATNLGRAFLEE 712