BLASTX nr result

ID: Cimicifuga21_contig00025477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025477
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307589.1| predicted protein [Populus trichocarpa] gi|2...   202   4e-50
ref|XP_002520725.1| conserved hypothetical protein [Ricinus comm...   188   8e-46
ref|NP_001234966.1| uncharacterized protein LOC100306689 [Glycin...   185   6e-45
ref|XP_002272980.1| PREDICTED: uncharacterized protein LOC100244...   185   6e-45
emb|CAN61445.1| hypothetical protein VITISV_024138 [Vitis vinifera]   185   8e-45

>ref|XP_002307589.1| predicted protein [Populus trichocarpa] gi|222857038|gb|EEE94585.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score =  202 bits (515), Expect = 4e-50
 Identities = 90/124 (72%), Positives = 106/124 (85%), Gaps = 4/124 (3%)
 Frame = -1

Query: 535 FCRKNIVLGSKS----NESQFLDEDGLIEDMDGYMNHLSLEYDSVWDTKPSWCQPWTITL 368
           F  K +V G  S    NESQFLDE+G ++DMDGY+N+LSLEYDSVWDTKPSWCQPWTITL
Sbjct: 49  FRGKTVVFGGNSSDIPNESQFLDENGAVDDMDGYLNYLSLEYDSVWDTKPSWCQPWTITL 108

Query: 367 TGALIVAFSWIVLHSAIISTVVLSLICAWWYIFLYSYPKAYADMIAERRKRVNSGVEDTF 188
           TG L++A SW++LHS +++T+VL LIC WWYIFLYSYPK YADMIAERRKRV +GVEDTF
Sbjct: 109 TGVLVIAGSWLILHSVVVTTIVLLLICTWWYIFLYSYPKVYADMIAERRKRVTNGVEDTF 168

Query: 187 GVTK 176
           G+TK
Sbjct: 169 GMTK 172


>ref|XP_002520725.1| conserved hypothetical protein [Ricinus communis]
           gi|223540110|gb|EEF41687.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 173

 Score =  188 bits (478), Expect = 8e-46
 Identities = 87/151 (57%), Positives = 112/151 (74%), Gaps = 3/151 (1%)
 Frame = -1

Query: 619 QRQSAPKPHLVYHNFSCKTYSIKLPTANFCRKNIVLGSKS---NESQFLDEDGLIEDMDG 449
           +  S+ + HL   +      S  L +A    K +V G  S   NESQFLDE+G+++DMDG
Sbjct: 21  KNDSSSRTHLRKRSSWPNISSYTLNSAKIRGKTVVFGGNSSDPNESQFLDENGVVDDMDG 80

Query: 448 YMNHLSLEYDSVWDTKPSWCQPWTITLTGALIVAFSWIVLHSAIISTVVLSLICAWWYIF 269
           Y+N+LSLEYDSVWDTKPSWCQPWTI +TG   +A SW++ HS ++++VVL L+C+WWYIF
Sbjct: 81  YLNYLSLEYDSVWDTKPSWCQPWTIAVTGVSGIACSWLIFHSVVVTSVVLFLVCSWWYIF 140

Query: 268 LYSYPKAYADMIAERRKRVNSGVEDTFGVTK 176
           LYSYPKAYA+MIAERRK+V SG EDT+G  K
Sbjct: 141 LYSYPKAYAEMIAERRKKVTSGSEDTYGWKK 171


>ref|NP_001234966.1| uncharacterized protein LOC100306689 [Glycine max]
           gi|255629283|gb|ACU14986.1| unknown [Glycine max]
          Length = 166

 Score =  185 bits (470), Expect = 6e-45
 Identities = 88/147 (59%), Positives = 108/147 (73%), Gaps = 4/147 (2%)
 Frame = -1

Query: 604 PKPHLVYHNFSCKTYSIKLPTANFCRKNIVLGSKSNESQ----FLDEDGLIEDMDGYMNH 437
           P  HL + + S  T S          + IV G   ++S+    F DE+G + DM+GY+NH
Sbjct: 24  PNSHLRFPSSSSVTSSTS------SNRIIVFGVNPSDSKKDPSFFDENGAVNDMEGYLNH 77

Query: 436 LSLEYDSVWDTKPSWCQPWTITLTGALIVAFSWIVLHSAIISTVVLSLICAWWYIFLYSY 257
           LSLEYDSVWDTKPSWCQPWTI LTG  I+A SW++LHS II++++ SLICAWWYIFLYSY
Sbjct: 78  LSLEYDSVWDTKPSWCQPWTIALTGVSIIAISWLILHSVIITSLISSLICAWWYIFLYSY 137

Query: 256 PKAYADMIAERRKRVNSGVEDTFGVTK 176
           PKAY+DMIAERR+RV +GVEDTFG  K
Sbjct: 138 PKAYSDMIAERRERVTNGVEDTFGQKK 164


>ref|XP_002272980.1| PREDICTED: uncharacterized protein LOC100244184 [Vitis vinifera]
           gi|296085207|emb|CBI28702.3| unnamed protein product
           [Vitis vinifera]
          Length = 169

 Score =  185 bits (470), Expect = 6e-45
 Identities = 87/149 (58%), Positives = 110/149 (73%), Gaps = 3/149 (2%)
 Frame = -1

Query: 613 QSAPKPHLVYHNFSCKTYSIKLPTANFCRKNIVLGSKSN---ESQFLDEDGLIEDMDGYM 443
           QS  + H     FS K  S         R+ + + +  N   ES F+DE+G ++DMDGY+
Sbjct: 19  QSPSQTHFSNSIFSPKISSTTRKPPISRRETVAIAANPNDPKESVFMDENGAVDDMDGYL 78

Query: 442 NHLSLEYDSVWDTKPSWCQPWTITLTGALIVAFSWIVLHSAIISTVVLSLICAWWYIFLY 263
           N+LSLEYDSVWDTKPSWCQPWTI LTG  ++A SW++LHSA+I+++VLS+I  WWYIFLY
Sbjct: 79  NYLSLEYDSVWDTKPSWCQPWTIMLTGVSVIACSWLILHSAVITSLVLSVISLWWYIFLY 138

Query: 262 SYPKAYADMIAERRKRVNSGVEDTFGVTK 176
           SYPKAY+DMIAERRK+V  GVEDTFG+ K
Sbjct: 139 SYPKAYSDMIAERRKKVTRGVEDTFGLKK 167


>emb|CAN61445.1| hypothetical protein VITISV_024138 [Vitis vinifera]
          Length = 416

 Score =  185 bits (469), Expect = 8e-45
 Identities = 80/107 (74%), Positives = 96/107 (89%)
 Frame = -1

Query: 496 ESQFLDEDGLIEDMDGYMNHLSLEYDSVWDTKPSWCQPWTITLTGALIVAFSWIVLHSAI 317
           ES F+DE+G ++DMDGY+NHLSLEYDSVWDTKPSWCQPWTI LTG   +A SW++LHSA+
Sbjct: 308 ESVFMDENGAVDDMDGYLNHLSLEYDSVWDTKPSWCQPWTIMLTGVSXIACSWLILHSAV 367

Query: 316 ISTVVLSLICAWWYIFLYSYPKAYADMIAERRKRVNSGVEDTFGVTK 176
           I+++VLS+I  WWYIFLYSYPKAY+DMIAERRK+V SGVEDTFG+ K
Sbjct: 368 ITSLVLSVISLWWYIFLYSYPKAYSDMIAERRKKVTSGVEDTFGLKK 414


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