BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025468
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   215   3e-54
ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containi...   215   3e-54
ref|XP_002511627.1| pentatricopeptide repeat-containing protein,...   209   2e-52
emb|CBI39452.3| unnamed protein product [Vitis vinifera]              207   6e-52
ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containi...   207   6e-52

>ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02060, chloroplastic-like [Cucumis sativus]
          Length = 720

 Score =  215 bits (548), Expect = 3e-54
 Identities = 100/140 (71%), Positives = 124/140 (88%), Gaps = 1/140 (0%)
 Frame = -3

Query: 420 ITFNSLFSVLLRRGRTNMAKKLFDEMLSS-GVSPDVFTFNTLIRGFCLNSMVDDGFRFFN 244
           +TFNSL ++LL+RGRTNMAKK++DEMLS+ GV+PD FTFN LIRGFC+N MVDDGFR FN
Sbjct: 185 VTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFN 244

Query: 243 DMAQYQCNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLNPNIVTYTTLIRGYCE 64
           D++++ C PDV+TYNTLVDGLCRAGKVT+A+N+VKGM +KS DLNPN+VTYTTLIRGYC 
Sbjct: 245 DLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCA 304

Query: 63  KQCIGEALDVFEEMIGCGMR 4
           K+ I +AL VFEEM+  G++
Sbjct: 305 KREIEKALAVFEEMVNQGLK 324



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 44/142 (30%), Positives = 73/142 (51%), Gaps = 2/142 (1%)
 Frame = -3

Query: 420 ITFNSLFSVLLRRGRTNMAKKLFDEMLSSGV--SPDVFTFNTLIRGFCLNSMVDDGFRFF 247
           +T+N+L   L R G+  +A  +   M    V  +P+V T+ TLIRG+C    ++     F
Sbjct: 256 VTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVF 315

Query: 246 NDMAQYQCNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLNPNIVTYTTLIRGYC 67
            +M       + ITYNTL+ GLC A K     ++++G     +  +P+  T+ TL+  +C
Sbjct: 316 EEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGT-FSPDTCTFNTLMHCHC 374

Query: 66  EKQCIGEALDVFEEMIGCGMRP 1
               + +AL VFE M    ++P
Sbjct: 375 HAGNLDDALKVFERMSELKIQP 396



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 6/143 (4%)
 Frame = -3

Query: 420 ITFNSLFSVLLRRGRTNMAKKLFDEMLSSGV-SPDVFTFNTLIRGFCLNSMVDDGFRFFN 244
           IT+N+L   L    +    K + +     G  SPD  TFNTL+   C    +DD  + F 
Sbjct: 328 ITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFE 387

Query: 243 DMAQYQCNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLN-----PNIVTYTTLI 79
            M++ +  PD  TY+ LV  LC+ G    A +L+  +  +   L+     P +  Y  + 
Sbjct: 388 RMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIF 447

Query: 78  RGYCEKQCIGEALDVFEEMIGCG 10
           +  CE     +A   F +++  G
Sbjct: 448 KYLCETGKTKKAEKAFRQLMRRG 470



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/137 (26%), Positives = 64/137 (46%)
 Frame = -3

Query: 414 FNSLFSVLLRRGRTNMAKKLFDEMLSSGVSPDVFTFNTLIRGFCLNSMVDDGFRFFNDMA 235
           +N +F  L   G+T  A+K F +++  G   D  ++ TLI G C     + G+     M 
Sbjct: 443 YNPIFKYLCETGKTKKAEKAFRQLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELLVLML 501

Query: 234 QYQCNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLNPNIVTYTTLIRGYCEKQC 55
           +    PD  TY +L++GL    K  +A   ++ M R S    PN  T+ +++    E+  
Sbjct: 502 RKDFXPDFETYESLINGLLHMDKPLLALQSLEKMLRSSH--RPNSSTFHSILAKLLEQGR 559

Query: 54  IGEALDVFEEMIGCGMR 4
             E+  + + M+   +R
Sbjct: 560 ASESASLIQLMLDKNIR 576



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
 Frame = -3

Query: 417 TFNSLFSVLLRRGRTNMAKK-LFD-EMLSSG-VSPDVFTFNTLIRGFCLNSMVDDGFRFF 247
           ++ S+  +L R    N A+  LF  E  S G V  +   FN+L+R F    +  +  + F
Sbjct: 113 SYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRAGLFQESIKVF 172

Query: 246 NDMAQYQCNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLNPNIVTYTTLIRGYC 67
             M  +  +P V+T+N+L+  L + G+  +A  +   M   +  + P+  T+  LIRG+C
Sbjct: 173 TIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEML-STYGVTPDTFTFNILIRGFC 231

Query: 66  EKQCIGEALDVFEEMIGCGMRP 1
               + +   +F ++   G  P
Sbjct: 232 MNGMVDDGFRIFNDLSRFGCEP 253



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 7/126 (5%)
 Frame = -3

Query: 417 TFNSLFSVLLRRGRTNMAKKLFDEMLSSGVSPDVFTFNTLIRGFCLNSMVDDGFRFFNDM 238
           TFN+L       G  + A K+F+ M    + PD  T++ L+R  C     +      + +
Sbjct: 365 TFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKL 424

Query: 237 AQYQ-------CNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLNPNIVTYTTLI 79
            + +       C P V  YN +   LC  GK   A    + + R+ +   P   +Y TLI
Sbjct: 425 LERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPP---SYKTLI 481

Query: 78  RGYCEK 61
            G+C++
Sbjct: 482 MGHCKE 487


>ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Cucumis sativus]
          Length = 757

 Score =  215 bits (548), Expect = 3e-54
 Identities = 100/140 (71%), Positives = 124/140 (88%), Gaps = 1/140 (0%)
 Frame = -3

Query: 420 ITFNSLFSVLLRRGRTNMAKKLFDEMLSS-GVSPDVFTFNTLIRGFCLNSMVDDGFRFFN 244
           +TFNSL ++LL+RGRTNMAKK++DEMLS+ GV+PD FTFN LIRGFC+N MVDDGFR FN
Sbjct: 185 VTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFN 244

Query: 243 DMAQYQCNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLNPNIVTYTTLIRGYCE 64
           D++++ C PDV+TYNTLVDGLCRAGKVT+A+N+VKGM +KS DLNPN+VTYTTLIRGYC 
Sbjct: 245 DLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCA 304

Query: 63  KQCIGEALDVFEEMIGCGMR 4
           K+ I +AL VFEEM+  G++
Sbjct: 305 KREIEKALAVFEEMVNQGLK 324



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 44/142 (30%), Positives = 73/142 (51%), Gaps = 2/142 (1%)
 Frame = -3

Query: 420 ITFNSLFSVLLRRGRTNMAKKLFDEMLSSGV--SPDVFTFNTLIRGFCLNSMVDDGFRFF 247
           +T+N+L   L R G+  +A  +   M    V  +P+V T+ TLIRG+C    ++     F
Sbjct: 256 VTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVF 315

Query: 246 NDMAQYQCNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLNPNIVTYTTLIRGYC 67
            +M       + ITYNTL+ GLC A K     ++++G     +  +P+  T+ TL+  +C
Sbjct: 316 EEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGT-FSPDTCTFNTLMHCHC 374

Query: 66  EKQCIGEALDVFEEMIGCGMRP 1
               + +AL VFE M    ++P
Sbjct: 375 HAGNLDDALKVFERMSELKIQP 396



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 6/143 (4%)
 Frame = -3

Query: 420 ITFNSLFSVLLRRGRTNMAKKLFDEMLSSGV-SPDVFTFNTLIRGFCLNSMVDDGFRFFN 244
           IT+N+L   L    +    K + +     G  SPD  TFNTL+   C    +DD  + F 
Sbjct: 328 ITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFE 387

Query: 243 DMAQYQCNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLN-----PNIVTYTTLI 79
            M++ +  PD  TY+ LV  LC+ G    A +L+  +  +   L+     P +  Y  + 
Sbjct: 388 RMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIF 447

Query: 78  RGYCEKQCIGEALDVFEEMIGCG 10
           +  CE     +A   F +++  G
Sbjct: 448 KYLCETGKTKKAEKAFRQLMRRG 470



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 36/137 (26%), Positives = 64/137 (46%)
 Frame = -3

Query: 414 FNSLFSVLLRRGRTNMAKKLFDEMLSSGVSPDVFTFNTLIRGFCLNSMVDDGFRFFNDMA 235
           +N +F  L   G+T  A+K F +++  G   D  ++ TLI G C     + G+     M 
Sbjct: 443 YNPIFKYLCETGKTKKAEKAFRQLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELLVLML 501

Query: 234 QYQCNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLNPNIVTYTTLIRGYCEKQC 55
           +    PD  TY +L++GL    K  +A   ++ M R S    PN  T+ +++    E+  
Sbjct: 502 RKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSH--RPNSSTFHSILAKLLEQGR 559

Query: 54  IGEALDVFEEMIGCGMR 4
             E+  + + M+   +R
Sbjct: 560 TSESASLIQLMLDKNIR 576



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
 Frame = -3

Query: 417 TFNSLFSVLLRRGRTNMAKK-LFD-EMLSSG-VSPDVFTFNTLIRGFCLNSMVDDGFRFF 247
           ++ S+  +L R    N A+  LF  E  S G V  +   FN+L+R F    +  +  + F
Sbjct: 113 SYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRAGLFQESIKVF 172

Query: 246 NDMAQYQCNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLNPNIVTYTTLIRGYC 67
             M  +  +P V+T+N+L+  L + G+  +A  +   M   +  + P+  T+  LIRG+C
Sbjct: 173 TIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEML-STYGVTPDTFTFNILIRGFC 231

Query: 66  EKQCIGEALDVFEEMIGCGMRP 1
               + +   +F ++   G  P
Sbjct: 232 MNGMVDDGFRIFNDLSRFGCEP 253



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 7/126 (5%)
 Frame = -3

Query: 417 TFNSLFSVLLRRGRTNMAKKLFDEMLSSGVSPDVFTFNTLIRGFCLNSMVDDGFRFFNDM 238
           TFN+L       G  + A K+F+ M    + PD  T++ L+R  C     +      + +
Sbjct: 365 TFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKL 424

Query: 237 AQYQ-------CNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLNPNIVTYTTLI 79
            + +       C P V  YN +   LC  GK   A    + + R+ +   P   +Y TLI
Sbjct: 425 LERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPP---SYKTLI 481

Query: 78  RGYCEK 61
            G+C++
Sbjct: 482 MGHCKE 487


>ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548807|gb|EEF50296.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1163

 Score =  209 bits (532), Expect = 2e-52
 Identities = 96/141 (68%), Positives = 123/141 (87%), Gaps = 1/141 (0%)
 Frame = -3

Query: 420 ITFNSLFSVLLRRGRTNMAKKLFDEMLSS-GVSPDVFTFNTLIRGFCLNSMVDDGFRFFN 244
           +TFNSL  +LL+RGRTNMA+ +FDEMLS+ GV+PD +TFN LIRGFC NSMVD+GFRFF 
Sbjct: 192 VTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFK 251

Query: 243 DMAQYQCNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLNPNIVTYTTLIRGYCE 64
           +M++++C+PD++TYNTLVDGLCRAGKV IAHN+V GM +KS++LNP++VTYTTL+RGYC 
Sbjct: 252 EMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCM 311

Query: 63  KQCIGEALDVFEEMIGCGMRP 1
           K  I EAL VFEEM+  G++P
Sbjct: 312 KHEIDEALVVFEEMVSKGLKP 332



 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 2/142 (1%)
 Frame = -3

Query: 420 ITFNSLFSVLLRRGRTNMAKKLFDEML--SSGVSPDVFTFNTLIRGFCLNSMVDDGFRFF 247
           +T+N+L   L R G+ N+A  + + M+  S+ ++PDV T+ TL+RG+C+   +D+    F
Sbjct: 263 VTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVF 322

Query: 246 NDMAQYQCNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLNPNIVTYTTLIRGYC 67
            +M      P+ ITYNTL+ GLC   K+     + +G       + P+  T  TL+  +C
Sbjct: 323 EEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFI-PDTCTLNTLMNAHC 381

Query: 66  EKQCIGEALDVFEEMIGCGMRP 1
               + +AL+VFE+M+   +RP
Sbjct: 382 NAGNLNDALEVFEKMMVLNVRP 403



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/124 (27%), Positives = 63/124 (50%)
 Frame = -3

Query: 414 FNSLFSVLLRRGRTNMAKKLFDEMLSSGVSPDVFTFNTLIRGFCLNSMVDDGFRFFNDMA 235
           + S+F  L R G+T  A+++F +++  G   D  +F  LI+G C     + G+     M 
Sbjct: 450 YKSMFEFLCRNGKTAKAERVFRQLMKRGTQ-DPLSFKILIKGHCREGTFEAGYELLVLML 508

Query: 234 QYQCNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLNPNIVTYTTLIRGYCEKQC 55
           +    PD+ TY +L+DGL + G+  +A+  ++ M + S    P   T+ +++     K C
Sbjct: 509 RRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSH--VPETSTFHSILARLLAKGC 566

Query: 54  IGEA 43
             E+
Sbjct: 567 AHES 570



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/126 (24%), Positives = 64/126 (50%), Gaps = 7/126 (5%)
 Frame = -3

Query: 417 TFNSLFSVLLRRGRTNMAKKLFDEMLSSGVSPDVFTFNTLIRGFCLNSMVDDGFRFFNDM 238
           T N+L +     G  N A ++F++M+   V PD  T++ LIR  C     +   + F+++
Sbjct: 372 TLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDEL 431

Query: 237 AQYQ-------CNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLNPNIVTYTTLI 79
           ++ +       C P V  Y ++ + LCR GK   A  + + + ++ +    + +++  LI
Sbjct: 432 SEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQ---DPLSFKILI 488

Query: 78  RGYCEK 61
           +G+C +
Sbjct: 489 KGHCRE 494



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/130 (28%), Positives = 63/130 (48%)
 Frame = -3

Query: 411 NSLFSVLLRRGRTNMAKKLFDEMLSSGVSPDVFTFNTLIRGFCLNSMVDDGFRFFNDMAQ 232
           N LFS+   + R+N   KL D             FN+LIR +    +  +  + FN M  
Sbjct: 139 NFLFSI---KRRSNGTVKLEDRF-----------FNSLIRSYGKAGLFQESVQVFNSMKS 184

Query: 231 YQCNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLNPNIVTYTTLIRGYCEKQCI 52
              +P V+T+N+L+  L + G+  +A ++   M   +  + P+  T+  LIRG+C+   +
Sbjct: 185 VGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEML-STYGVTPDTYTFNILIRGFCKNSMV 243

Query: 51  GEALDVFEEM 22
            E    F+EM
Sbjct: 244 DEGFRFFKEM 253



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 6/143 (4%)
 Frame = -3

Query: 420 ITFNSLFSVLLRRGRTNMAKKLFDEMLSSG-VSPDVFTFNTLIRGFCLNSMVDDGFRFFN 244
           IT+N+L   L    + +  K++F+  L  G   PD  T NTL+   C    ++D    F 
Sbjct: 335 ITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFE 394

Query: 243 DMAQYQCNPDVITYNTLVDGLCRAGKVTIAHNLV-----KGMCRKSSDLNPNIVTYTTLI 79
            M      PD  TY+ L+  LC+ G    A  L      K +  +     P +  Y ++ 
Sbjct: 395 KMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMF 454

Query: 78  RGYCEKQCIGEALDVFEEMIGCG 10
              C      +A  VF +++  G
Sbjct: 455 EFLCRNGKTAKAERVFRQLMKRG 477


>emb|CBI39452.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  207 bits (528), Expect = 6e-52
 Identities = 95/141 (67%), Positives = 123/141 (87%), Gaps = 1/141 (0%)
 Frame = -3

Query: 420 ITFNSLFSVLLRRGRTNMAKKLFDEMLSS-GVSPDVFTFNTLIRGFCLNSMVDDGFRFFN 244
           +TFNSL S++L+RGRT+MAK+LFDEML + GV+PD +TFN LIRGFC+NSMVD+GF FF 
Sbjct: 201 VTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFK 260

Query: 243 DMAQYQCNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLNPNIVTYTTLIRGYCE 64
           +M++++C+PDV+TYNTLVDGLCRAGKV IAHN+VKGM +KS +L+PN+VTYTTLIRGYC 
Sbjct: 261 EMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCM 320

Query: 63  KQCIGEALDVFEEMIGCGMRP 1
           KQ + EAL +  EM+  G++P
Sbjct: 321 KQDMAEALSLLAEMVSRGLKP 341



 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
 Frame = -3

Query: 420 ITFNSLFSVLLRRGRTNMAKKLFDEML--SSGVSPDVFTFNTLIRGFCLNSMVDDGFRFF 247
           +T+N+L   L R G+  +A  +   M+  S  +SP+V T+ TLIRG+C+   + +     
Sbjct: 272 VTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLL 331

Query: 246 NDMAQYQCNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLNPNIVTYTTLIRGYC 67
            +M      P+ ITYNTL+ GLC A K+     +++GM      + P+  T  TLI+ +C
Sbjct: 332 AEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFI-PDTCTLNTLIKAHC 390

Query: 66  EKQCIGEALDVFEEMIGCGMRP 1
               + EA  VFE+M    ++P
Sbjct: 391 TMGKLEEAFSVFEKMSELRVQP 412



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 38/132 (28%), Positives = 65/132 (49%)
 Frame = -3

Query: 414 FNSLFSVLLRRGRTNMAKKLFDEMLSSGVSPDVFTFNTLIRGFCLNSMVDDGFRFFNDMA 235
           +N +F  L   G+T  A+++F +++  G   D  ++ TLI G C     + GF     M 
Sbjct: 459 YNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVLML 517

Query: 234 QYQCNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLNPNIVTYTTLIRGYCEKQC 55
           +    PD  TY  ++DGL + G   +AH  ++ M  KSS L P    + +++    EK C
Sbjct: 518 RRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKML-KSSHL-PTTAIFHSILAALVEKGC 575

Query: 54  IGEALDVFEEMI 19
             E+  + + M+
Sbjct: 576 AHESASLVKLML 587



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 6/143 (4%)
 Frame = -3

Query: 420 ITFNSLFSVLLRRGRTNMAKKLFDEMLSSG-VSPDVFTFNTLIRGFCLNSMVDDGFRFFN 244
           IT+N+L   L    + +  K++ + M+  G   PD  T NTLI+  C    +++ F  F 
Sbjct: 344 ITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFE 403

Query: 243 DMAQYQCNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLN-----PNIVTYTTLI 79
            M++ +  PD  TY+ LV  LC+ G    A      +  K   L+     P +  Y  + 
Sbjct: 404 KMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMF 463

Query: 78  RGYCEKQCIGEALDVFEEMIGCG 10
              C      +A  VF +++  G
Sbjct: 464 EYLCSNGKTKKAERVFRQLMKRG 486



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 7/126 (5%)
 Frame = -3

Query: 417 TFNSLFSVLLRRGRTNMAKKLFDEMLSSGVSPDVFTFNTLIRGFCLNSMVDDGFRFFNDM 238
           T N+L       G+   A  +F++M    V PD  T++ L+R  C          FF+++
Sbjct: 381 TLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDEL 440

Query: 237 AQYQ-------CNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLNPNIVTYTTLI 79
           A+ +       C P V  YN + + LC  GK   A  + + + ++ +   P   +Y TLI
Sbjct: 441 AEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPP---SYKTLI 497

Query: 78  RGYCEK 61
            G+C +
Sbjct: 498 LGHCRE 503


>ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Vitis vinifera]
          Length = 746

 Score =  207 bits (528), Expect = 6e-52
 Identities = 95/141 (67%), Positives = 123/141 (87%), Gaps = 1/141 (0%)
 Frame = -3

Query: 420 ITFNSLFSVLLRRGRTNMAKKLFDEMLSS-GVSPDVFTFNTLIRGFCLNSMVDDGFRFFN 244
           +TFNSL S++L+RGRT+MAK+LFDEML + GV+PD +TFN LIRGFC+NSMVD+GF FF 
Sbjct: 201 VTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFK 260

Query: 243 DMAQYQCNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLNPNIVTYTTLIRGYCE 64
           +M++++C+PDV+TYNTLVDGLCRAGKV IAHN+VKGM +KS +L+PN+VTYTTLIRGYC 
Sbjct: 261 EMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCM 320

Query: 63  KQCIGEALDVFEEMIGCGMRP 1
           KQ + EAL +  EM+  G++P
Sbjct: 321 KQDMAEALSLLAEMVSRGLKP 341



 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
 Frame = -3

Query: 420 ITFNSLFSVLLRRGRTNMAKKLFDEML--SSGVSPDVFTFNTLIRGFCLNSMVDDGFRFF 247
           +T+N+L   L R G+  +A  +   M+  S  +SP+V T+ TLIRG+C+   + +     
Sbjct: 272 VTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLL 331

Query: 246 NDMAQYQCNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLNPNIVTYTTLIRGYC 67
            +M      P+ ITYNTL+ GLC A K+     +++GM      + P+  T  TLI+ +C
Sbjct: 332 AEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFI-PDTCTLNTLIKAHC 390

Query: 66  EKQCIGEALDVFEEMIGCGMRP 1
               + EA  VFE+M    ++P
Sbjct: 391 TMGKLEEAFSVFEKMSELRVQP 412



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 38/132 (28%), Positives = 65/132 (49%)
 Frame = -3

Query: 414 FNSLFSVLLRRGRTNMAKKLFDEMLSSGVSPDVFTFNTLIRGFCLNSMVDDGFRFFNDMA 235
           +N +F  L   G+T  A+++F +++  G   D  ++ TLI G C     + GF     M 
Sbjct: 459 YNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVLML 517

Query: 234 QYQCNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLNPNIVTYTTLIRGYCEKQC 55
           +    PD  TY  ++DGL + G   +AH  ++ M  KSS L P    + +++    EK C
Sbjct: 518 RRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKML-KSSHL-PTTAIFHSILAALVEKGC 575

Query: 54  IGEALDVFEEMI 19
             E+  + + M+
Sbjct: 576 AHESASLVKLML 587



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 6/143 (4%)
 Frame = -3

Query: 420 ITFNSLFSVLLRRGRTNMAKKLFDEMLSSG-VSPDVFTFNTLIRGFCLNSMVDDGFRFFN 244
           IT+N+L   L    + +  K++ + M+  G   PD  T NTLI+  C    +++ F  F 
Sbjct: 344 ITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFE 403

Query: 243 DMAQYQCNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLN-----PNIVTYTTLI 79
            M++ +  PD  TY+ LV  LC+ G    A      +  K   L+     P +  Y  + 
Sbjct: 404 KMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMF 463

Query: 78  RGYCEKQCIGEALDVFEEMIGCG 10
              C      +A  VF +++  G
Sbjct: 464 EYLCSNGKTKKAERVFRQLMKRG 486



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 7/126 (5%)
 Frame = -3

Query: 417 TFNSLFSVLLRRGRTNMAKKLFDEMLSSGVSPDVFTFNTLIRGFCLNSMVDDGFRFFNDM 238
           T N+L       G+   A  +F++M    V PD  T++ L+R  C          FF+++
Sbjct: 381 TLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDEL 440

Query: 237 AQYQ-------CNPDVITYNTLVDGLCRAGKVTIAHNLVKGMCRKSSDLNPNIVTYTTLI 79
           A+ +       C P V  YN + + LC  GK   A  + + + ++ +   P   +Y TLI
Sbjct: 441 AEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPP---SYKTLI 497

Query: 78  RGYCEK 61
            G+C +
Sbjct: 498 LGHCRE 503