BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025447
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]    88   8e-16
ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containi...    85   7e-15
ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
ref|XP_003625591.1| Pentatricopeptide repeat-containing protein ...    82   5e-14
ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containi...    82   6e-14

>emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]
          Length = 763

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/62 (69%), Positives = 49/62 (79%)
 Frame = +2

Query: 35  TNHNHILNMYGKCGSLGDARRVFDEMLEHNVVSWTSLIAGYSQNRREKDAMEMY*QMRHS 214
           T  NHILNMYGKCGSL DA++VFD M E NVVSWTS+IAGYSQN +  +A+E Y QM  S
Sbjct: 99  TLQNHILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQS 158

Query: 215 GV 220
           GV
Sbjct: 159 GV 160



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/60 (41%), Positives = 43/60 (71%)
 Frame = +2

Query: 44  NHILNMYGKCGSLGDARRVFDEMLEHNVVSWTSLIAGYSQNRREKDAMEMY*QMRHSGVR 223
           N ++++Y KCGSL  AR++FD ++  +VVSW+SLI GY+Q    ++A++++  MR   V+
Sbjct: 508 NGLIDLYAKCGSLKTARKIFDSVINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVK 567


>ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 42/62 (67%), Positives = 48/62 (77%)
 Frame = +2

Query: 35  TNHNHILNMYGKCGSLGDARRVFDEMLEHNVVSWTSLIAGYSQNRREKDAMEMY*QMRHS 214
           T  NHILNMYGKC SL DA++VFD M E NVVSWTS+IAGYSQN +  +A+E Y QM  S
Sbjct: 99  TLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQS 158

Query: 215 GV 220
           GV
Sbjct: 159 GV 160



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/60 (41%), Positives = 42/60 (70%)
 Frame = +2

Query: 44  NHILNMYGKCGSLGDARRVFDEMLEHNVVSWTSLIAGYSQNRREKDAMEMY*QMRHSGVR 223
           N ++++Y KCGSL  A ++FD M+  +VVSW+SLI GY+Q    ++A++++  MR   V+
Sbjct: 508 NGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVK 567


>ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 855

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 40/58 (68%), Positives = 45/58 (77%)
 Frame = +2

Query: 44  NHILNMYGKCGSLGDARRVFDEMLEHNVVSWTSLIAGYSQNRREKDAMEMY*QMRHSG 217
           NHILNMYGKCGSL DAR+ FD M   NVVSWT +I+GYSQN +E DA+ MY QM  SG
Sbjct: 196 NHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSG 253



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/60 (41%), Positives = 39/60 (65%)
 Frame = +2

Query: 44  NHILNMYGKCGSLGDARRVFDEMLEHNVVSWTSLIAGYSQNRREKDAMEMY*QMRHSGVR 223
           N +++MY KCGSL  AR VF      ++VSW+SLI GY+Q     +A+ ++  M++ GV+
Sbjct: 602 NRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQ 661


>ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500606|gb|AES81809.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 887

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 38/58 (65%), Positives = 46/58 (79%)
 Frame = +2

Query: 44  NHILNMYGKCGSLGDARRVFDEMLEHNVVSWTSLIAGYSQNRREKDAMEMY*QMRHSG 217
           NH++NMYGKCGS+ DAR+VFD M   NVVSWTS+I+GYSQN +  DA+ MY QM  SG
Sbjct: 198 NHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSG 255


>ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 777

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 39/58 (67%), Positives = 45/58 (77%)
 Frame = +2

Query: 44  NHILNMYGKCGSLGDARRVFDEMLEHNVVSWTSLIAGYSQNRREKDAMEMY*QMRHSG 217
           NHILNMYGKCGSL DAR+ FD M   +VVSWT +I+GYSQN +E DA+ MY QM  SG
Sbjct: 119 NHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSG 176



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/60 (43%), Positives = 40/60 (66%)
 Frame = +2

Query: 44  NHILNMYGKCGSLGDARRVFDEMLEHNVVSWTSLIAGYSQNRREKDAMEMY*QMRHSGVR 223
           N +++MY KCG L  AR VFD     ++VSW+SLI GY+Q    ++A+ ++  MR+ GV+
Sbjct: 524 NRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQ 583