BLASTX nr result

ID: Cimicifuga21_contig00025445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025445
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66167.1| hypothetical protein VITISV_000143 [Vitis vinifera]    70   2e-10
emb|CAN77614.1| hypothetical protein VITISV_035196 [Vitis vinifera]    70   2e-10
ref|XP_002308172.1| predicted protein [Populus trichocarpa] gi|2...    70   3e-10
emb|CAN82584.1| hypothetical protein VITISV_031018 [Vitis vinifera]    69   5e-10
emb|CAN78776.1| hypothetical protein VITISV_029750 [Vitis vinifera]    69   7e-10

>emb|CAN66167.1| hypothetical protein VITISV_000143 [Vitis vinifera]
          Length = 251

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
 Frame = +2

Query: 2   KVPSKISFFAWCASLDSILTIDSLKKCHFLGRTSDVCLLYSIVP*SVSHVLLSCPFSWLV 181
           KVP+K++FFAW A+   ILT+D L+K  +  +  + C L      SV+H+LL C     +
Sbjct: 93  KVPTKVAFFAWEAAWGKILTLDRLQKRGW--QFPNRCFLCGCEEESVNHILLHCIVVRAL 150

Query: 182 WSCFFGESKLSWLCSGRVVHFFSYWHNGPFLSRGRS-IWNFPPFAVPWGLWYNRIEVFFK 358
           W   F    + W+    V      W  GPF+ + R  IWN  P  + W +W  R  + FK
Sbjct: 151 WDIVFALVGVQWVFPELVKEALFSWR-GPFVGKKRKKIWNSIPLCIFWTVWKERNRLAFK 209

Query: 359 G 361
           G
Sbjct: 210 G 210


>emb|CAN77614.1| hypothetical protein VITISV_035196 [Vitis vinifera]
          Length = 1522

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
 Frame = +2

Query: 2    KVPSKISFFAWCASLDSILTIDSLKKCHFLGRTSDVCLLYSIVP*SVSHVLLSCPFSWLV 181
            KVP+K++FFAW AS + +LT+D L++  +  +  + C L      +V+H+LL C     +
Sbjct: 1364 KVPTKVAFFAWEASWEKVLTLDKLQRRGW--QFPNRCFLCGCEEENVNHILLHCIVVRAL 1421

Query: 182  WSCFFGESKLSWLCSGRVVHFFSYWHNGPFLSRGRS-IWNFPPFAVPWGLWYNRIEVFFK 358
            W         +W+   RV      W  GPF+ R R  IW   P  + W +W  R  + F+
Sbjct: 1422 WEIVLALFGANWVFPERVKDMLVSW-RGPFVGRKRKRIWTSIPLCIFWTVWKERNRLAFR 1480

Query: 359  G---C*SRLKAFFAFNL 400
            G      +LK  F  NL
Sbjct: 1481 GGSLAIQKLKNXFVCNL 1497


>ref|XP_002308172.1| predicted protein [Populus trichocarpa] gi|222854148|gb|EEE91695.1|
           predicted protein [Populus trichocarpa]
          Length = 670

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 37/118 (31%), Positives = 53/118 (44%)
 Frame = +2

Query: 5   VPSKISFFAWCASLDSILTIDSLKKCHFLGRTSDVCLLYSIVP*SVSHVLLSCPFSWLVW 184
           VP K+  F W A +  I T   L +   L  ++  C +      SV H+LL C   W+VW
Sbjct: 350 VPPKVEVFCWMAIIKKINTRSMLVRRGILDISAAACPICLAEEESVDHILLHCHKHWIVW 409

Query: 185 SCFFGESKLSWLCSGRVVHFFSYWHNGPFLSRGRSIWNFPPFAVPWGLWYNRIEVFFK 358
           S       L+W C   +   FS W +  +    +  W    F+V W LW +R +V FK
Sbjct: 410 SKIINWWGLAWCCPKNLAALFSQWDSLVYGKFQKKAWLMLLFSVAWSLWLHRNDVIFK 467


>emb|CAN82584.1| hypothetical protein VITISV_031018 [Vitis vinifera]
          Length = 555

 Score = 68.9 bits (167), Expect = 5e-10
 Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
 Frame = +2

Query: 5   VPSKISFFAWCASLDSILTIDSLKKCHFLGRTSDVCLLYSIVP*SVSHVLLSCPFSWLVW 184
           VPSK+SFFAW AS + +LT D LK+  ++   ++ C L  +   S +H+L+ C  + ++W
Sbjct: 398 VPSKVSFFAWEASWEKVLTQDQLKRRGWI--LANRCCLCCVDEESTNHILVHCSKTKILW 455

Query: 185 SCFFGESKLSWLCSGRVVHFFSYWHNGPFLSRGRSIWNFPPFAVPWGLWYNRIEVFFKG- 361
              F    ++W+    V      WH        R +W   P  + W +W  R  + F   
Sbjct: 456 DLVFSLFGVNWVLPFSVKDTLLSWHVSFKDKNHRKVWRAAPLCLFWTVWKERNRIVFDNK 515

Query: 362 --C*SRLKAFFAFNL 400
                RLK+ F  NL
Sbjct: 516 ALSTQRLKSSFVCNL 530


>emb|CAN78776.1| hypothetical protein VITISV_029750 [Vitis vinifera]
          Length = 763

 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
 Frame = +2

Query: 2    KVPSKISFFAWCASLDSILTIDSLKKCHFLGRTSDVCLLYSIVP*SVSHVLLSCPFSWLV 181
            KVP+K++FFAW AS + +LT+D L++  +  +  + C L      +V+H+LL C     +
Sbjct: 605  KVPTKVAFFAWEASWEKLLTLDKLQRRGW--QLPNRCFLCGCDEENVNHILLHCTVVRPL 662

Query: 182  WSCFFGESKLSWLCSGRVVHFFSYWHNGPFLSRGR-SIWNFPPFAVPWGLWYNRIEVFFK 358
            W         +W+   +V      W  GPF+ R R  IW   P  + W +W  R  + F+
Sbjct: 663  WEIVLALFGANWVFPEKVKEMLVSW-RGPFVGRKRKKIWTSIPLCIFWTVWKERNRLAFR 721

Query: 359  G---C*SRLKAFFAFNL 400
            G      +LK  F  NL
Sbjct: 722  GGSLAIQKLKNSFVCNL 738


Top