BLASTX nr result

ID: Cimicifuga21_contig00025435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025435
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317554.1| nbs-lrr resistance protein [Populus trichoca...    76   2e-12
ref|XP_002322892.1| nbs-lrr resistance protein [Populus trichoca...    64   1e-08
ref|XP_002307892.1| nbs-lrr resistance protein [Populus trichoca...    57   2e-06

>ref|XP_002317554.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222860619|gb|EEE98166.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 730

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 30/52 (57%), Positives = 40/52 (76%)
 Frame = +2

Query: 8   WKIEGLCLKLLPRLEVDWKTVQSKMKYLRFVEVSHCHELRSFPCDVHNYGVW 163
           WK+ GLCLK LPRL ++W+ VQ  M  +R+VEVSHC+ L+SFPC++   GVW
Sbjct: 677 WKVVGLCLKFLPRLHMEWEMVQRVMPRIRYVEVSHCYMLKSFPCNIDKLGVW 728


>ref|XP_002322892.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|105923264|gb|ABF81467.1| NBS-LRR type disease
           resistance protein [Populus trichocarpa]
           gi|222867522|gb|EEF04653.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 855

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 26/50 (52%), Positives = 36/50 (72%)
 Frame = +2

Query: 14  IEGLCLKLLPRLEVDWKTVQSKMKYLRFVEVSHCHELRSFPCDVHNYGVW 163
           +EGLCLK LP L+ DW  +Q  M+ +R+VEVS+C  L++FPC V+  G W
Sbjct: 801 LEGLCLKFLPFLDEDWTDLQKTMQSIRYVEVSNCFNLKNFPCPVNKPGTW 850


>ref|XP_002307892.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222853868|gb|EEE91415.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 851

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/53 (45%), Positives = 32/53 (60%)
 Frame = +2

Query: 5   PWKIEGLCLKLLPRLEVDWKTVQSKMKYLRFVEVSHCHELRSFPCDVHNYGVW 163
           PW IEGLC K+L  L++DWK V+  M  L++ EVS C  L +FP  +     W
Sbjct: 794 PWNIEGLCFKVLRNLKLDWKNVEKDMPSLQYAEVSGCLNLINFPHPLDKLATW 846


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