BLASTX nr result
ID: Cimicifuga21_contig00025434
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00025434
(973 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_567421.1| F-box/LRR-repeat protein [Arabidopsis thaliana]... 110 5e-22
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera] 108 3e-21
ref|XP_002300142.1| f-box family protein [Populus trichocarpa] g... 102 1e-19
ref|XP_002871011.1| hypothetical protein ARALYDRAFT_908174 [Arab... 102 2e-19
ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein... 101 3e-19
>ref|NP_567421.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
gi|75249810|sp|Q94B46.1|FBL74_ARATH RecName:
Full=F-box/LRR-repeat protein At4g14096
gi|14596145|gb|AAK68800.1| Unknown protein [Arabidopsis
thaliana] gi|22136112|gb|AAM91134.1| unknown protein
[Arabidopsis thaliana] gi|332657971|gb|AEE83371.1|
F-box/LRR-repeat protein [Arabidopsis thaliana]
Length = 468
Score = 110 bits (275), Expect = 5e-22
Identities = 100/321 (31%), Positives = 154/321 (47%), Gaps = 11/321 (3%)
Frame = +2
Query: 41 DRLSTLHESILHCILSYLDMKDVIRTSLLSNTWRYIWISTPFLTFNNKLFFQPNKDYE-Q 217
D +S+L E+I ILS+L K+ TS+LS WRY++ P L + ++ P + E
Sbjct: 8 DIISSLPEAISCHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDESVYLNPENETEVS 67
Query: 218 KHFIDFVDRLLYFRDCSTIQTFNLVWDTEYCKPRHVDSWLRCAVSGNIQKLDLQFYPDTR 397
F+DFVDR+L + S + F+L + +P + W+ + + LDL Y +T
Sbjct: 68 SSFMDFVDRVLALQGNSPLHKFSLKIG-DGVEPDRIIPWINNVLERGVSDLDLHVYMETE 126
Query: 398 LFVFPPCLFTSESLVSLKL----FLGFDDSFHTKIVLPKRIGLPLLRTLNLRS--IDISG 559
FVFP +F S++LV LKL L F+D + LP L+TL + S + G
Sbjct: 127 -FVFPSEMFLSKTLVRLKLMLYPLLEFEDVY-----------LPKLKTLYIDSCYFEKYG 174
Query: 560 KDLVKILSGCLVLECLKLSECKFTGIDLLITIDSAQLKDLVIEMCDGDVVYGPNKAIPFK 739
L K+LSGC +LE L L + + D ++ LK L D P
Sbjct: 175 IGLTKLLSGCPILEDLVLDDIPWCTWD-FASVSVPTLKRLTFSTQVRD-------EFPKS 226
Query: 740 IIISGCPKLVKLRLKHTILRTDYFLENLSALETAEIDMVVKENTLEGVGAKCMV----NC 907
+ I P LV L+ T+ Y N +L A ID+ + + +G G MV +
Sbjct: 227 VSID-TPNLVYLKFTDTV-AGKYPKVNFDSLVEAHIDLRLLQGH-QGYGENDMVGNATDF 283
Query: 908 LKGVCNAKSLTFSASSLQVLS 970
+ +CN K+L S+++LQVL+
Sbjct: 284 IMRICNVKTLYLSSNTLQVLT 304
>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
Length = 607
Score = 108 bits (269), Expect = 3e-21
Identities = 98/323 (30%), Positives = 158/323 (48%), Gaps = 13/323 (4%)
Frame = +2
Query: 41 DRLSTLHESILHCILSYLDMKDVIRTSLLSNTWRYIWISTPFLTFNNKLFFQPNKDYEQK 220
D +S L + +L ILS+L K + TS+LS WRY+W S P L F+++L+ P+ E +
Sbjct: 10 DIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLVELE 69
Query: 221 H----FIDFVDRLLYFRDCSTIQTFNLVWDTEYCKPRHVDSWLRCAVSGNIQKLDLQFYP 388
F +FVD +L + S I+ F L + V SW+ A+ +Q+LDL
Sbjct: 70 ERIIMFQNFVDGVLRHSEVSCIKKFRLGYRDNNLD--SVYSWICIALERRVQELDLHLLI 127
Query: 389 DTRLFVFPPCLFTSESLVSLKLFLGFDDSFHTKIVLPKRIGLPLLRTLNLRSIDISGKDL 568
D R+ PP F ++LV +KL S + +P + LP L+ L+L+S++ S D
Sbjct: 128 DWRV-ELPPMFFICKTLVVVKL------SCALFLDIPTTVWLPSLKALHLKSVEYSDDDS 180
Query: 569 V-KILSGCLVLECLKLSECKFTGIDLLITIDSAQLKDL-VIEMCDGDVVYGPNKAIPFKI 742
+ K+LSGC VLE L + E + ++ + + LK L + DG + +K+
Sbjct: 181 IQKLLSGCPVLEELVI-EREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKV 239
Query: 743 IISGCPKLVKLRLKHTILRTDYFLENLSALETAEIDMVVKENTLE------GVGAKCMVN 904
++ P L L + L DYF+++L +L A ID+ E G+ +
Sbjct: 240 VVD-APNLEYLSIT-DYLSKDYFVKDLPSLVKAFIDVEQDSEEFEESPHNGGISYHGPIY 297
Query: 905 CLKG-VCNAKSLTFSASSLQVLS 970
L G + N K L+ + +L LS
Sbjct: 298 ELLGRISNVKCLSLTGVTLDSLS 320
>ref|XP_002300142.1| f-box family protein [Populus trichocarpa]
gi|222847400|gb|EEE84947.1| f-box family protein
[Populus trichocarpa]
Length = 481
Score = 102 bits (255), Expect = 1e-19
Identities = 95/321 (29%), Positives = 154/321 (47%), Gaps = 11/321 (3%)
Frame = +2
Query: 41 DRLSTLHESILHCILSYLDMKDVIRTSLLSNTWRYIWISTPFLTFNNKLFFQPNKDYEQK 220
DR+S L + I+ ILS+L D I+T +LS W IW P L F + + E +
Sbjct: 45 DRISNLPDPIIQHILSFLPADDAIKTCILSKRWDSIWTLVPNLIFRREC----SCSQEAE 100
Query: 221 HFIDFVDRLLYFRDCSTIQTFNLVWDTEYCKPRHVDSWLRCAVSGNIQKLDLQFY----P 388
+F FVD+ L ++ F + ++ C VDSW+ AV +++L L+F+
Sbjct: 101 NFAVFVDKALMHYCSPKVKKFLVEFEFTECFKAQVDSWVDFAVRLKVEELCLEFHREIAD 160
Query: 389 DTRLFVFPPCLFTSESLVSLKLFLGFDDSFHTKIVLPKRIGLPLLRTLNLRSIDISGKDL 568
D + P L++ ++ + KL L F K+ K++ L+ L++ +S + +
Sbjct: 161 DPDYYYLPNFLYS--NIPAEKLSLRFCALSPNKL---KQVSWMSLKVLSISYSWLSNEMI 215
Query: 569 VKILSGCLVLECLKLSECKFTGIDLLITIDSAQLKDLVIEMCDGDVVYGP-NKAIPFKII 745
I GC +LE LKL++C G D + T S+ LKDLV+ D +GP +K F I
Sbjct: 216 KNIFLGCSLLEYLKLNQC--CGFDQINTNFSSSLKDLVV-----DGSWGPEDKFGDFVIT 268
Query: 746 ISGCPKLVKLRLKHTILRTDYFLENLSALETAEIDMVVK------ENTLEGVGAKCMVNC 907
I G P L+ L L + R +Y L ++S+L A I +K + + +
Sbjct: 269 IKG-PNLLSLTLAGYMHRANYMLLDVSSLVEASIGYRMKSCSHGCRSNWYSAHRSVLHDL 327
Query: 908 LKGVCNAKSLTFSASSLQVLS 970
L+ + + + LT LQVLS
Sbjct: 328 LEKLQHVEKLTIGTWCLQVLS 348
>ref|XP_002871011.1| hypothetical protein ARALYDRAFT_908174 [Arabidopsis lyrata subsp.
lyrata] gi|297316848|gb|EFH47270.1| hypothetical protein
ARALYDRAFT_908174 [Arabidopsis lyrata subsp. lyrata]
Length = 415
Score = 102 bits (253), Expect = 2e-19
Identities = 100/323 (30%), Positives = 157/323 (48%), Gaps = 8/323 (2%)
Frame = +2
Query: 26 SSNGGDRLSTLHESILHCILSYLDMKDVIRTSLLSNTWRYIWISTPFLTFNNKLFFQPNK 205
S++G D +S+L ++ILH I SY+ K IRTS+LS W++IW TP L+ PN
Sbjct: 7 STDGVDFISSLPDAILHHIFSYITTKVAIRTSVLSKRWKHIWYETPSLSI-VCYRVDPNS 65
Query: 206 DYEQKHFIDFVDRLLYFRDCSTIQTFNLVWDTEYCKPRHVDSWLRCAVSGNIQKLDLQFY 385
+++ L I +F++ + P +D+W+ AVS N + L L+F
Sbjct: 66 ----------INKTLRSYSAPKITSFDVTMSNDVTAP-EIDTWINLAVSRNAEDLSLKFR 114
Query: 386 PDTRLFVFPPCLFTSESLVSLKLFLGFDDSFHTKIVLPK-RIGLPLLRTLNLRSIDISGK 562
+ R FP F + SL L L LG+ + ++PK + LRTL+L +S
Sbjct: 115 YNYR---FPDTFFINSSLKQLSLNLGYSN------LIPKCVVSWSSLRTLSLNRCKMSDG 165
Query: 563 DLVKILSGCLVLECLKLSECKFTGIDLLITIDSAQLKDLVIEMCDGDVVYGPN-KAIPFK 739
KILSGCL+LE L L+ C D L +D + K L + + VYG P +
Sbjct: 166 SFAKILSGCLLLESLTLNLC-----DRLYHLDLS--KSLSLRRLE---VYGDRWIEAPAR 215
Query: 740 IIISGCPKLVKLRLKHTILRTDYFLENLSALETAEIDM--VVKENTLEGVGAKCMVNCLK 913
I+ P + LRL++ + L ++S+L A +++ V+ T E V A+ + ++
Sbjct: 216 IV---APHIHYLRLEN--YQRPSNLVDVSSLTEANLNLSYVLDYFTCEIVEAELLQFMVR 270
Query: 914 GVC----NAKSLTFSASSLQVLS 970
+ N K LT LQ+LS
Sbjct: 271 EILVKLQNVKKLTIGGIFLQILS 293
>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
vinifera]
Length = 610
Score = 101 bits (251), Expect = 3e-19
Identities = 91/327 (27%), Positives = 154/327 (47%), Gaps = 13/327 (3%)
Frame = +2
Query: 29 SNGGDRLSTLHESILHCILSYLDMKDVIRTSLLSNTWRYIWISTPFLTFNNKLFFQPNKD 208
S+ D +S L +SIL ILS+L MK V+ TS+LS W+++W P L F +
Sbjct: 70 SSRKDGISELSDSILIRILSFLPMKYVVATSILSKRWQFLWTMVPNLVFRFR-------- 121
Query: 209 YEQKHFIDFVDRLLYFRDCSTIQTFNLVWDTEYCKPRHVDSWLRCAVSGNIQKLDLQF-- 382
+HF++ +D+ L S I+ F + + + V+ W+R A N+++L LQF
Sbjct: 122 RRDEHFVNSIDKTLVLHQNSQIKKFLIDFTYQSQFQSSVNVWIRHATRKNVEELHLQFRV 181
Query: 383 ------YPDTRLFVFPPCLFTSESLVSLKLFLGFDDSFHTKIVLPKRIGLPLLRTLNLRS 544
P P L+ + S+V L L+ I I P L+TL++ S
Sbjct: 182 GQHIRSSPMDYAHALPQFLYANSSIVKLSLWF-------CNIKPTWVISWPSLKTLSIGS 234
Query: 545 IDISGKDLVKILSGCLVLECLKLSECKFTGIDLLITIDSAQLKDLVIEMCDGDVVYGPNK 724
+++ + +ILSGC LE L+L C GI+ L I SA LK LVI + +
Sbjct: 235 VELCDDLIEEILSGCPALESLELHHC--FGINSL-NITSASLKKLVINR-----YWDSSH 286
Query: 725 AIPFKIIISGCPKLVKLRLKHTILRTDYFLENLSALETAEI--DMVVKENTLEG---VGA 889
+ ++ P + L + + + ++N+ +L A + ++ ++E + +
Sbjct: 287 SHHRSVLKISAPNVQSLGILGNMYTKECRVKNVPSLFDASLNFELAMQEGNPKDHYKLYH 346
Query: 890 KCMVNCLKGVCNAKSLTFSASSLQVLS 970
K ++ LK V + K+LT +QVLS
Sbjct: 347 KVVMKLLKSVNHVKALTVGTWCIQVLS 373