BLASTX nr result

ID: Cimicifuga21_contig00025402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025402
         (696 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270964.1| PREDICTED: agamous-like MADS-box protein AGL...    90   4e-16
emb|CBI25112.3| unnamed protein product [Vitis vinifera]               88   2e-15
ref|XP_002522084.1| mads box protein, putative [Ricinus communis...    86   7e-15
ref|XP_002530713.1| mads box protein, putative [Ricinus communis...    85   1e-14
ref|XP_002313198.1| predicted protein [Populus trichocarpa] gi|2...    85   1e-14

>ref|XP_002270964.1| PREDICTED: agamous-like MADS-box protein AGL62 [Vitis vinifera]
           gi|147772544|emb|CAN63001.1| hypothetical protein
           VITISV_024203 [Vitis vinifera]
          Length = 214

 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 50/125 (40%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
 Frame = -1

Query: 591 KHRLHIAFTKRRAGLFSKAREFCSRTGASVAVIVFSPAGRLFSYGFPSVESVVHRYLIQE 412
           K+ L + F+KRR+GLF KA E C+  GA+VA+IVFSPAG++FS+G P VES+V R+    
Sbjct: 20  KNHLQVTFSKRRSGLFKKASELCTLCGANVAIIVFSPAGKVFSFGHPDVESIVDRFF--- 76

Query: 411 RAALPKWRPVPLTSTQSGGDNGMNELVL----LTNQLEEEKRRAQNIEKFKKADLDQLPW 244
               P   P  L   ++  +  + EL L    + NQLE EK+R + + + ++A   Q  W
Sbjct: 77  -TCNPIPEPNGLHLIEAHRNASVRELNLQLTQVLNQLEAEKKRGEILSQMRRASQTQCWW 135

Query: 243 DSTID 229
           ++ I+
Sbjct: 136 EAPIN 140


>emb|CBI25112.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 46/121 (38%), Positives = 69/121 (57%)
 Frame = -1

Query: 591 KHRLHIAFTKRRAGLFSKAREFCSRTGASVAVIVFSPAGRLFSYGFPSVESVVHRYLIQE 412
           K+ L + F+KRR+GLF KA E C+  GA+VA+IVFSPAG++FS+G P VES+V R+    
Sbjct: 20  KNHLQVTFSKRRSGLFKKASELCTLCGANVAIIVFSPAGKVFSFGHPDVESIVDRFFTVR 79

Query: 411 RAALPKWRPVPLTSTQSGGDNGMNELVLLTNQLEEEKRRAQNIEKFKKADLDQLPWDSTI 232
              L                    +L  + NQLE EK+R + + + ++A   Q  W++ I
Sbjct: 80  ELNL--------------------QLTQVLNQLEAEKKRGEILSQMRRASQTQCWWEAPI 119

Query: 231 D 229
           +
Sbjct: 120 N 120


>ref|XP_002522084.1| mads box protein, putative [Ricinus communis]
           gi|223538683|gb|EEF40284.1| mads box protein, putative
           [Ricinus communis]
          Length = 226

 Score = 85.9 bits (211), Expect = 7e-15
 Identities = 48/155 (30%), Positives = 82/155 (52%), Gaps = 1/155 (0%)
 Frame = -1

Query: 591 KHRLHIAFTKRRAGLFSKAREFCSRTGASVAVIVFSPAGRLFSYGFPSVESVVHRYLIQE 412
           K  L + F+KRRAGLF KA E C+  G  +A++VFSPA + FS+G P VESV+ R+L + 
Sbjct: 39  KTHLQVTFSKRRAGLFKKASELCTLCGVEIAILVFSPANKAFSFGHPEVESVLDRFLARH 98

Query: 411 RAALPKWRPVPLTSTQSGGDNGMN-ELVLLTNQLEEEKRRAQNIEKFKKADLDQLPWDST 235
                      + + ++     +N +L    NQ+E+EK++ + +++ +K+  +   W++ 
Sbjct: 99  PLPTSSSAHQLIEAHRNANVCELNMQLTHTLNQMEDEKKKGELLDQIRKSSQNMCWWEAP 158

Query: 234 IDXXXXXXXXXXXXXXXXLKMKVTEHLQTL*ILNG 130
           ID                LK  VT+ +  + I +G
Sbjct: 159 IDELGMHELEQLRFALEELKKNVTKQISKILINSG 193


>ref|XP_002530713.1| mads box protein, putative [Ricinus communis]
           gi|223529727|gb|EEF31667.1| mads box protein, putative
           [Ricinus communis]
          Length = 183

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 46/122 (37%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
 Frame = -1

Query: 591 KHRLHIAFTKRRAGLFSKAREFCSRTGASVAVIVFSPAGRLFSYGFPSVESVVHRYLIQE 412
           K  L + F+KRRAGLF KA E C+  G  +A+IVFSPAG+ FS+G P V SV+ R+L   
Sbjct: 19  KSHLQVTFSKRRAGLFKKASELCTLCGVEIAIIVFSPAGKAFSFGHPEVGSVLKRFL--A 76

Query: 411 RAALPKWRPVPLTSTQSGGDNGMN-ELVLLTNQLEEEKRRAQNIEKFKKADLDQLPWDST 235
           R  L       + + ++     +N +L+   NQLE EK+R + + + +K+      W++ 
Sbjct: 77  RNPLGSISCQFIQADRNANVRELNVKLIHALNQLEAEKKRGEALNRMRKSSQSMCWWEAP 136

Query: 234 ID 229
           +D
Sbjct: 137 VD 138


>ref|XP_002313198.1| predicted protein [Populus trichocarpa] gi|222849606|gb|EEE87153.1|
           predicted protein [Populus trichocarpa]
          Length = 217

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 41/122 (33%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
 Frame = -1

Query: 591 KHRLHIAFTKRRAGLFSKAREFCSRTGASVAVIVFSPAGRLFSYGFPSVESVVHRYLIQE 412
           K+ L + F+KRRAGLF KA E C+  G  +A++VFSPA + FS+G P V+S++ R+L + 
Sbjct: 21  KNHLQVTFSKRRAGLFKKASELCTLCGVDIAILVFSPAHKAFSFGHPDVDSIMDRFLTRN 80

Query: 411 RAALPKWRPVPLTSTQSGGDNGMN-ELVLLTNQLEEEKRRAQNIEKFKKADLDQLPWDST 235
                      + + ++      N +L  + NQLE EKR ++ + + +K+   Q  W++ 
Sbjct: 81  APPQSSGTHQLIEAHRNANVREHNMQLTQILNQLEAEKRHSETLNQMRKSSRSQCWWEAP 140

Query: 234 ID 229
           ++
Sbjct: 141 VE 142


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