BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025388
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containi...   153   1e-35
emb|CBI29835.3| unnamed protein product [Vitis vinifera]              153   1e-35
ref|XP_002308939.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31
ref|XP_003625140.1| Pentatricopeptide repeat-containing protein ...   130   1e-28
ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containi...   123   1e-26

>ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Vitis vinifera]
          Length = 848

 Score =  153 bits (387), Expect = 1e-35
 Identities = 74/115 (64%), Positives = 90/115 (78%), Gaps = 3/115 (2%)
 Frame = +3

Query: 54  SPRPKISKKTRI--KTLIYCKKSNSEGAWEETK-IGFVDYDKGKHKVSVQINGLRKDDLP 224
           SP PK S  T    KTLI CK+S S+GA EE K + FVDYD GKH+VS  ++GLRK D+P
Sbjct: 20  SPHPKSSNPTFTTHKTLISCKESKSKGALEEKKKVVFVDYDNGKHQVSTHVSGLRKADIP 79

Query: 225 KRHRLRIEGDRFQVDWSISEVVNKILKLKHWKDIEGILNRWGGRFARKNFPVLIR 389
           K +RLR+E DRFQ DWS+SEVV ++LKL HW D+EG+LNRW GRF+RKNFP+LIR
Sbjct: 80  KHYRLRVEADRFQKDWSVSEVVERLLKLNHWDDVEGLLNRWVGRFSRKNFPLLIR 134


>emb|CBI29835.3| unnamed protein product [Vitis vinifera]
          Length = 852

 Score =  153 bits (387), Expect = 1e-35
 Identities = 74/115 (64%), Positives = 90/115 (78%), Gaps = 3/115 (2%)
 Frame = +3

Query: 54  SPRPKISKKTRI--KTLIYCKKSNSEGAWEETK-IGFVDYDKGKHKVSVQINGLRKDDLP 224
           SP PK S  T    KTLI CK+S S+GA EE K + FVDYD GKH+VS  ++GLRK D+P
Sbjct: 20  SPHPKSSNPTFTTHKTLISCKESKSKGALEEKKKVVFVDYDNGKHQVSTHVSGLRKADIP 79

Query: 225 KRHRLRIEGDRFQVDWSISEVVNKILKLKHWKDIEGILNRWGGRFARKNFPVLIR 389
           K +RLR+E DRFQ DWS+SEVV ++LKL HW D+EG+LNRW GRF+RKNFP+LIR
Sbjct: 80  KHYRLRVEADRFQKDWSVSEVVERLLKLNHWDDVEGLLNRWVGRFSRKNFPLLIR 134


>ref|XP_002308939.1| predicted protein [Populus trichocarpa] gi|222854915|gb|EEE92462.1|
           predicted protein [Populus trichocarpa]
          Length = 786

 Score =  139 bits (350), Expect = 2e-31
 Identities = 63/101 (62%), Positives = 82/101 (81%), Gaps = 1/101 (0%)
 Frame = +3

Query: 90  KTLIYCKKSNSEGAWEETKIGFVDYDKGKHKVSVQINGLRKDDLPKRHRLRIEGDRFQVD 269
           K  I CK S S+ A+EE K GFVDYDKG H VS Q++G+RKD +P+R+R+R++GDRFQ D
Sbjct: 7   KPKILCKNSKSDAAFEEKKSGFVDYDKGIHHVSTQVSGIRKDQIPQRYRIRVQGDRFQKD 66

Query: 270 WSISEVVNKILKLKHWK-DIEGILNRWGGRFARKNFPVLIR 389
           WS+S+VV K+L+L H   D+EG+LNRW GRFARKNFP+LI+
Sbjct: 67  WSVSQVVQKVLELDHKSDDVEGLLNRWVGRFARKNFPLLIK 107


>ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500155|gb|AES81358.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 855

 Score =  130 bits (326), Expect = 1e-28
 Identities = 70/129 (54%), Positives = 89/129 (68%), Gaps = 3/129 (2%)
 Frame = +3

Query: 12  MATVNSTISSKL---LPSPRPKISKKTRIKTLIYCKKSNSEGAWEETKIGFVDYDKGKHK 182
           MAT  S    +L     S RP  S  TR       KKS++E A++E K GFVDYD+G H+
Sbjct: 1   MATTTSPYCIQLSGVTESTRPPKSTTTR-------KKSSNEVAFKEKKDGFVDYDRGHHQ 53

Query: 183 VSVQINGLRKDDLPKRHRLRIEGDRFQVDWSISEVVNKILKLKHWKDIEGILNRWGGRFA 362
           VS +I+GLRK+D+P  +RLR+ G+RFQ DW++SEVV+ +L L    DIEG+LNRW GRFA
Sbjct: 54  VSTKISGLRKEDIPAHYRLRVAGNRFQKDWTVSEVVDSVLSLTLRDDIEGLLNRWIGRFA 113

Query: 363 RKNFPVLIR 389
           RKNFP LIR
Sbjct: 114 RKNFPFLIR 122


>ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Glycine max]
          Length = 832

 Score =  123 bits (309), Expect = 1e-26
 Identities = 58/104 (55%), Positives = 80/104 (76%), Gaps = 2/104 (1%)
 Frame = +3

Query: 84  RIKTLIYCKKSNSEGAWEETKIGFVDYDKGKHKVSVQINGLRKDDLPKRHRLRIEGDRFQ 263
           R +  I CKK + + A++ETK GFVDYD+G+H+VS +I+GLRKDD+  R+RLR+ G+RFQ
Sbjct: 20  RWRISISCKKKSDKLAFKETKEGFVDYDRGQHEVSTKISGLRKDDIAARYRLRVAGNRFQ 79

Query: 264 VDWSISEVVNKI--LKLKHWKDIEGILNRWGGRFARKNFPVLIR 389
           +DW++SEV   +  L L    D++G+LNRW GRFARKNFP LI+
Sbjct: 80  MDWTVSEVAELVLSLNLSDDDDVDGLLNRWVGRFARKNFPFLIK 123