BLASTX nr result

ID: Cimicifuga21_contig00025384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025384
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75040.1| hypothetical protein VITISV_026478 [Vitis vinifera]    99   3e-19
gb|AAL78659.1|AF405557_1 reverse transcriptase [Fagus sylvatica]       99   4e-19
emb|CAN70431.1| hypothetical protein VITISV_030910 [Vitis vinifera]    98   6e-19
emb|CAN82685.1| hypothetical protein VITISV_000485 [Vitis vinifera]    97   1e-18
emb|CAN84014.1| hypothetical protein VITISV_036140 [Vitis vinifera]    96   4e-18

>emb|CAN75040.1| hypothetical protein VITISV_026478 [Vitis vinifera]
          Length = 1776

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 41/77 (53%), Positives = 60/77 (77%)
 Frame = +3

Query: 3    EGRHIHDEILVANELINSRIRSRVPGLICKIDFTKAFDSVSWEFVDYMLQRCGFGHKWRL 182
            EGRHI D +L+ANE+++ + RS   G++ KIDF KA+D V W F+D++LQR GF  KWRL
Sbjct: 1172 EGRHILDAVLIANEVVDEKRRSGEEGIVFKIDFEKAYDHVDWGFLDHVLQRKGFSQKWRL 1231

Query: 183  WMKACLTTSYFSVLING 233
            W++ CL++S F++L+NG
Sbjct: 1232 WIRGCLSSSSFAILVNG 1248


>gb|AAL78659.1|AF405557_1 reverse transcriptase [Fagus sylvatica]
          Length = 168

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 41/76 (53%), Positives = 59/76 (77%)
 Frame = +3

Query: 6   GRHIHDEILVANELINSRIRSRVPGLICKIDFTKAFDSVSWEFVDYMLQRCGFGHKWRLW 185
           GR I D +L+ANE ++SRI+S +PGLICK+D  KA+D V+W+ + ++L R GFG KW  W
Sbjct: 40  GRQILDSVLIANECLDSRIKSGIPGLICKLDIEKAYDHVNWDCLFFILDRMGFGRKWVCW 99

Query: 186 MKACLTTSYFSVLING 233
           MKAC++T  +SV++NG
Sbjct: 100 MKACVSTVRYSVIVNG 115


>emb|CAN70431.1| hypothetical protein VITISV_030910 [Vitis vinifera]
          Length = 971

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 41/77 (53%), Positives = 59/77 (76%)
 Frame = +3

Query: 3   EGRHIHDEILVANELINSRIRSRVPGLICKIDFTKAFDSVSWEFVDYMLQRCGFGHKWRL 182
           EGRHI D +L+ANE+++ + RS   G++ KIDF KA+D V W F+D++LQR GF  KWRL
Sbjct: 207 EGRHILDAVLIANEVVDEKRRSGEEGIVFKIDFEKAYDHVDWGFLDHVLQRKGFSQKWRL 266

Query: 183 WMKACLTTSYFSVLING 233
           W++ CL +S F++L+NG
Sbjct: 267 WIRGCLYSSSFAILVNG 283


>emb|CAN82685.1| hypothetical protein VITISV_000485 [Vitis vinifera]
          Length = 1563

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 40/77 (51%), Positives = 59/77 (76%)
 Frame = +3

Query: 3   EGRHIHDEILVANELINSRIRSRVPGLICKIDFTKAFDSVSWEFVDYMLQRCGFGHKWRL 182
           EGRHI D +L+ANE+++ + RSR  G++ KIDF KA+D V W F+D++LQR  F  KWR 
Sbjct: 493 EGRHILDAVLIANEVVDEKRRSREEGIVFKIDFEKAYDHVDWGFLDHVLQRKRFSQKWRT 552

Query: 183 WMKACLTTSYFSVLING 233
           W++ CL++S F++L+NG
Sbjct: 553 WIRGCLSSSSFAILVNG 569


>emb|CAN84014.1| hypothetical protein VITISV_036140 [Vitis vinifera]
          Length = 940

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 40/77 (51%), Positives = 58/77 (75%)
 Frame = +3

Query: 3    EGRHIHDEILVANELINSRIRSRVPGLICKIDFTKAFDSVSWEFVDYMLQRCGFGHKWRL 182
            EGRHI D +L+ANE+++ + RS   G++ KIDF KA+D V W F+D++L+R GF  KWR 
Sbjct: 860  EGRHILDAVLIANEVVDEKRRSGEEGVVFKIDFEKAYDHVDWGFLDHVLERKGFSPKWRS 919

Query: 183  WMKACLTTSYFSVLING 233
            WM+ CL+ S F++L+NG
Sbjct: 920  WMRGCLSLSSFAILVNG 936


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