BLASTX nr result

ID: Cimicifuga21_contig00025376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025376
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10
dbj|BAK06595.1| predicted protein [Hordeum vulgare subsp. vulgare]     69   3e-10
ref|XP_002331322.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|XP_002331319.1| f-box family protein [Populus trichocarpa] g...    69   3e-10
ref|XP_002331320.1| f-box family protein [Populus trichocarpa] g...    69   4e-10

>ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
 Frame = -3

Query: 205 SSKNDEDRISTLPDVLLHQILSFMDMNEVVRTSILSKRWSYVWKSVPSVKINDPFYIS-- 32
           S  N+EDRISTLP+VLLH+ILSF+D  +VV+T +LSKRW  VWKS P +  N   + S  
Sbjct: 10  SLNNNEDRISTLPNVLLHRILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLI 69

Query: 31  NEDLVRDK 8
           N D   D+
Sbjct: 70  NSDYYEDE 77


>dbj|BAK06595.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 384

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 30/61 (49%), Positives = 44/61 (72%)
 Frame = -3

Query: 202 SKNDEDRISTLPDVLLHQILSFMDMNEVVRTSILSKRWSYVWKSVPSVKINDPFYISNED 23
           S+N  DR+S+LPD LLH ++SF+ M EVVRTS+LS RW +VW+S P ++I+   ++    
Sbjct: 17  SRNGVDRLSSLPDDLLHHVMSFLPMPEVVRTSLLSPRWRFVWRSTPFIRIDGAEFMDKSK 76

Query: 22  L 20
           L
Sbjct: 77  L 77


>ref|XP_002331322.1| predicted protein [Populus trichocarpa] gi|222873905|gb|EEF11036.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/52 (63%), Positives = 40/52 (76%)
 Frame = -3

Query: 205 SSKNDEDRISTLPDVLLHQILSFMDMNEVVRTSILSKRWSYVWKSVPSVKIN 50
           S  N+EDRISTLP+VLLH ILSF+D  +VV+T +LSKRW  VWKS P +  N
Sbjct: 10  SLNNNEDRISTLPNVLLHHILSFLDAVQVVQTCVLSKRWMNVWKSHPYLDFN 61


>ref|XP_002331319.1| f-box family protein [Populus trichocarpa]
           gi|222873902|gb|EEF11033.1| f-box family protein
           [Populus trichocarpa]
          Length = 453

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/68 (54%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
 Frame = -3

Query: 205 SSKNDEDRISTLPDVLLHQILSFMDMNEVVRTSILSKRWSYVWKSVPSVKINDPFYIS-- 32
           S  N+EDRISTLP+VLLH ILSF+D  +VV+T +LSKRW  VWKS P +  N   + S  
Sbjct: 29  SLNNNEDRISTLPNVLLHHILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLI 88

Query: 31  NEDLVRDK 8
           N D   D+
Sbjct: 89  NSDYYDDE 96


>ref|XP_002331320.1| f-box family protein [Populus trichocarpa]
           gi|222873903|gb|EEF11034.1| f-box family protein
           [Populus trichocarpa]
          Length = 453

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/52 (63%), Positives = 40/52 (76%)
 Frame = -3

Query: 205 SSKNDEDRISTLPDVLLHQILSFMDMNEVVRTSILSKRWSYVWKSVPSVKIN 50
           S  N+EDRISTLP+VLLH ILSF+D  +VV+T +LSKRW  VWKS P +  N
Sbjct: 29  SLNNNEDRISTLPNVLLHHILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFN 80


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