BLASTX nr result
ID: Cimicifuga21_contig00025376
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00025376 (261 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2... 70 1e-10 dbj|BAK06595.1| predicted protein [Hordeum vulgare subsp. vulgare] 69 3e-10 ref|XP_002331322.1| predicted protein [Populus trichocarpa] gi|2... 69 3e-10 ref|XP_002331319.1| f-box family protein [Populus trichocarpa] g... 69 3e-10 ref|XP_002331320.1| f-box family protein [Populus trichocarpa] g... 69 4e-10 >ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1| predicted protein [Populus trichocarpa] Length = 378 Score = 70.5 bits (171), Expect = 1e-10 Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 2/68 (2%) Frame = -3 Query: 205 SSKNDEDRISTLPDVLLHQILSFMDMNEVVRTSILSKRWSYVWKSVPSVKINDPFYIS-- 32 S N+EDRISTLP+VLLH+ILSF+D +VV+T +LSKRW VWKS P + N + S Sbjct: 10 SLNNNEDRISTLPNVLLHRILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLI 69 Query: 31 NEDLVRDK 8 N D D+ Sbjct: 70 NSDYYEDE 77 >dbj|BAK06595.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 384 Score = 69.3 bits (168), Expect = 3e-10 Identities = 30/61 (49%), Positives = 44/61 (72%) Frame = -3 Query: 202 SKNDEDRISTLPDVLLHQILSFMDMNEVVRTSILSKRWSYVWKSVPSVKINDPFYISNED 23 S+N DR+S+LPD LLH ++SF+ M EVVRTS+LS RW +VW+S P ++I+ ++ Sbjct: 17 SRNGVDRLSSLPDDLLHHVMSFLPMPEVVRTSLLSPRWRFVWRSTPFIRIDGAEFMDKSK 76 Query: 22 L 20 L Sbjct: 77 L 77 >ref|XP_002331322.1| predicted protein [Populus trichocarpa] gi|222873905|gb|EEF11036.1| predicted protein [Populus trichocarpa] Length = 335 Score = 69.3 bits (168), Expect = 3e-10 Identities = 33/52 (63%), Positives = 40/52 (76%) Frame = -3 Query: 205 SSKNDEDRISTLPDVLLHQILSFMDMNEVVRTSILSKRWSYVWKSVPSVKIN 50 S N+EDRISTLP+VLLH ILSF+D +VV+T +LSKRW VWKS P + N Sbjct: 10 SLNNNEDRISTLPNVLLHHILSFLDAVQVVQTCVLSKRWMNVWKSHPYLDFN 61 >ref|XP_002331319.1| f-box family protein [Populus trichocarpa] gi|222873902|gb|EEF11033.1| f-box family protein [Populus trichocarpa] Length = 453 Score = 69.3 bits (168), Expect = 3e-10 Identities = 37/68 (54%), Positives = 46/68 (67%), Gaps = 2/68 (2%) Frame = -3 Query: 205 SSKNDEDRISTLPDVLLHQILSFMDMNEVVRTSILSKRWSYVWKSVPSVKINDPFYIS-- 32 S N+EDRISTLP+VLLH ILSF+D +VV+T +LSKRW VWKS P + N + S Sbjct: 29 SLNNNEDRISTLPNVLLHHILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLI 88 Query: 31 NEDLVRDK 8 N D D+ Sbjct: 89 NSDYYDDE 96 >ref|XP_002331320.1| f-box family protein [Populus trichocarpa] gi|222873903|gb|EEF11034.1| f-box family protein [Populus trichocarpa] Length = 453 Score = 68.9 bits (167), Expect = 4e-10 Identities = 33/52 (63%), Positives = 40/52 (76%) Frame = -3 Query: 205 SSKNDEDRISTLPDVLLHQILSFMDMNEVVRTSILSKRWSYVWKSVPSVKIN 50 S N+EDRISTLP+VLLH ILSF+D +VV+T +LSKRW VWKS P + N Sbjct: 29 SLNNNEDRISTLPNVLLHHILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFN 80